RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 REC8O95072 547 aa11.42□□□□□ -0.58
USP6-204ENST00000572949 ESCO1Q5FWF5 840 aa11.42□□□□□ -0.58
USP6-204ENST00000572949 BCL2L13Q9BXK5 485 aa11.42□□□□□ -0.58
USP6-204ENST00000572949 CHMP4BP1P59074 171 aa11.42□□□□□ -0.58
USP6-204ENST00000572949 HSP90AB4PQ58FF6 505 aa11.42□□□□□ -0.58
USP6-204ENST00000572949 CALRP27797 417 aaKnown RBP11.41□□□□□ -0.58
USP6-204ENST00000572949 CNNM1Q9NRU3 951 aa11.41□□□□□ -0.58
USP6-204ENST00000572949 DESP17661 470 aa11.41□□□□□ -0.58
USP6-204ENST00000572949 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
USP6-204ENST00000572949 KDM4AO75164 1064 aa11.41□□□□□ -0.58
USP6-204ENST00000572949 NEFHP12036 1026 aa11.41□□□□□ -0.58
USP6-204ENST00000572949 CCDC144AA2RUR9 1427 aa11.41□□□□□ -0.58
USP6-204ENST00000572949 TNIKQ9UKE5 1360 aa11.41□□□□□ -0.58
USP6-204ENST00000572949 PRDM2Q13029 1718 aa11.4□□□□□ -0.58
USP6-204ENST00000572949 DIAPH1O60610 1272 aaKnown RBP11.4□□□□□ -0.58
USP6-204ENST00000572949 OLFM4Q6UX06 510 aa11.4□□□□□ -0.58
USP6-204ENST00000572949 ABTB2Q8N961 1025 aa11.4□□□□□ -0.58
USP6-204ENST00000572949 TXLNAP40222 546 aa11.4□□□□□ -0.58
USP6-204ENST00000572949 JPH4Q96JJ6 628 aa11.4□□□□□ -0.58
USP6-204ENST00000572949 ZKSCAN2Q63HK3 967 aa11.39□□□□□ -0.59
USP6-204ENST00000572949 PHLDB1Q86UU1 1377 aa11.39□□□□□ -0.59
USP6-204ENST00000572949 SMG6Q86US8 1419 aaKnown RBP11.39□□□□□ -0.59
USP6-204ENST00000572949 TIMELESSQ9UNS1 1208 aa11.39□□□□□ -0.59
USP6-204ENST00000572949 DDX11L8A8MPP1 907 aa11.39□□□□□ -0.59
USP6-204ENST00000572949 SASS6Q6UVJ0 657 aa11.39□□□□□ -0.59
USP6-204ENST00000572949 TOM1L2Q6ZVM7 507 aa11.39□□□□□ -0.59
USP6-204ENST00000572949 VPS37CA5D8V6 355 aaPredicted RBP11.39□□□□□ -0.59
USP6-204ENST00000572949 DNAI2Q9GZS0 605 aa11.38□□□□□ -0.59
USP6-204ENST00000572949 NLRP13Q86W25 1043 aa11.38□□□□□ -0.59
USP6-204ENST00000572949 DDX49Q9Y6V7 483 aaKnown RBP11.38□□□□□ -0.59
USP6-204ENST00000572949 NLRP6P59044 892 aa11.38□□□□□ -0.59
USP6-204ENST00000572949 CAGE1Q8TC20 777 aa11.38□□□□□ -0.59
USP6-204ENST00000572949 TMOD2Q9NZR1 351 aa11.38□□□□□ -0.59
USP6-204ENST00000572949 CHMP5Q9NZZ3 219 aa11.38□□□□□ -0.59
USP6-204ENST00000572949 CCDC73Q6ZRK6 1079 aa11.38□□□□□ -0.59
USP6-204ENST00000572949 DDX54Q8TDD1 881 aaKnown RBP11.38□□□□□ -0.59
USP6-204ENST00000572949 ZHX3Q9H4I2 956 aa11.38□□□□□ -0.59
USP6-204ENST00000572949 MAGEC2Q9UBF1 373 aaPredicted RBP11.37□□□□□ -0.59
USP6-204ENST00000572949 ANKRD62A6NC57 917 aa11.37□□□□□ -0.59
USP6-204ENST00000572949 RIPK4P57078 832 aa11.37□□□□□ -0.59
USP6-204ENST00000572949 SMC3Q9UQE7 1217 aa11.37□□□□□ -0.59
USP6-204ENST00000572949 ERC1Q8IUD2 1116 aa11.37□□□□□ -0.59
USP6-204ENST00000572949 ANKRD18AQ8IVF6 992 aa11.37□□□□□ -0.59
USP6-204ENST00000572949 CCER2I3L3R5 266 aa11.36□□□□□ -0.59
USP6-204ENST00000572949 SEPT7Q16181 437 aaKnown RBP11.36□□□□□ -0.59
USP6-204ENST00000572949 SCLT1Q96NL6 688 aa11.36□□□□□ -0.59
USP6-204ENST00000572949 TTC39AQ5SRH9 613 aa11.36□□□□□ -0.59
USP6-204ENST00000572949 BAZ1AQ9NRL2 1556 aaPredicted RBP11.36□□□□□ -0.59
USP6-204ENST00000572949 DCTN1Q14203 1278 aa11.35□□□□□ -0.59
USP6-204ENST00000572949 PDILTQ8N807 584 aa11.35□□□□□ -0.59
USP6-204ENST00000572949 API5Q9BZZ5 524 aaKnown RBP11.35□□□□□ -0.59
USP6-204ENST00000572949 PANK3Q9H999 370 aa11.35□□□□□ -0.59
USP6-204ENST00000572949 TATP17735 454 aaPredicted RBP11.35□□□□□ -0.59
USP6-204ENST00000572949 MPHOSPH8Q99549 860 aa11.35□□□□□ -0.59
USP6-204ENST00000572949 NINLQ9Y2I6 1382 aa11.35□□□□□ -0.59
USP6-204ENST00000572949 WDR78Q5VTH9 848 aa11.35□□□□□ -0.59
USP6-204ENST00000572949 DRC1Q96MC2 740 aa11.35□□□□□ -0.59
USP6-204ENST00000572949 ATP2B1P20020 1258 aa11.35□□□□□ -0.59
USP6-204ENST00000572949 SKIDA1Q1XH10 827 aa11.35□□□□□ -0.59
USP6-204ENST00000572949 CABP4P57796 275 aa11.34□□□□□ -0.59
USP6-204ENST00000572949 TEX35Q5T0J7 233 aa11.34□□□□□ -0.59
USP6-204ENST00000572949 MIA2Q96PC5 1412 aa11.34□□□□□ -0.59
USP6-204ENST00000572949 UBTFL1P0CB47 393 aaPredicted RBP11.34□□□□□ -0.59
USP6-204ENST00000572949 ZNF76P36508 570 aa11.34□□□□□ -0.59
USP6-204ENST00000572949 TTLL5Q6EMB2 1281 aa11.34□□□□□ -0.59
USP6-204ENST00000572949 NAT10Q9H0A0 1025 aaKnown RBP11.34□□□□□ -0.59
USP6-204ENST00000572949 ACBD3Q9H3P7 528 aa11.34□□□□□ -0.59
USP6-204ENST00000572949 HMOX1P09601 288 aa11.34□□□□□ -0.59
USP6-204ENST00000572949 C16orf71Q8IYS4 520 aaPredicted RBP11.34□□□□□ -0.59
USP6-204ENST00000572949 MAP7D2Q96T17 732 aa11.34□□□□□ -0.59
USP6-204ENST00000572949 PLEKHO1Q53GL0 409 aaPredicted RBP11.34□□□□□ -0.59
USP6-204ENST00000572949 STK11IPQ8N1F8 1099 aa11.34□□□□□ -0.59
USP6-204ENST00000572949 CCDC158Q5M9N0 1113 aa11.33□□□□□ -0.6
USP6-204ENST00000572949 DNAJC2Q99543 621 aaKnown RBP11.33□□□□□ -0.6
USP6-204ENST00000572949 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.33□□□□□ -0.6
USP6-204ENST00000572949 KIF15Q9NS87 1388 aa11.33□□□□□ -0.6
USP6-204ENST00000572949 E9PSI1 815 aa11.33□□□□□ -0.6
USP6-204ENST00000572949 SOGA3Q5TF21 947 aa11.33□□□□□ -0.6
USP6-204ENST00000572949 CA8P35219 290 aa11.32□□□□□ -0.6
USP6-204ENST00000572949 DDX19BQ9UMR2 479 aa11.32□□□□□ -0.6
USP6-204ENST00000572949 FSD1Q9BTV5 496 aa11.32□□□□□ -0.6
USP6-204ENST00000572949 DHX57Q6P158 1386 aaKnown RBP11.32□□□□□ -0.6
USP6-204ENST00000572949 PSMA5P28066 241 aa11.32□□□□□ -0.6
USP6-204ENST00000572949 DEKP35659 375 aaKnown RBP11.32□□□□□ -0.6
USP6-204ENST00000572949 CCDC191Q8NCU4 936 aa11.32□□□□□ -0.6
USP6-204ENST00000572949 SKOR2Q2VWA4 1001 aaPredicted RBP11.32□□□□□ -0.6
USP6-204ENST00000572949 ERLIN2O94905 339 aa11.31□□□□□ -0.6
USP6-204ENST00000572949 PTPRGP23470 1445 aa11.31□□□□□ -0.6
USP6-204ENST00000572949 TXNDC2Q86VQ3 553 aa11.31□□□□□ -0.6
USP6-204ENST00000572949 CNTROBQ8N137 903 aa11.31□□□□□ -0.6
USP6-204ENST00000572949 SDF4Q9BRK5 362 aa11.31□□□□□ -0.6
USP6-204ENST00000572949 NACAP1Q9BZK3 213 aa11.31□□□□□ -0.6
USP6-204ENST00000572949 FAM161AQ3B820 660 aa11.31□□□□□ -0.6
USP6-204ENST00000572949 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
USP6-204ENST00000572949 GRM1Q13255 1194 aa11.31□□□□□ -0.6
USP6-204ENST00000572949 BICDL1Q6ZP65 573 aa11.31□□□□□ -0.6
USP6-204ENST00000572949 FILIP1LQ4L180 1135 aa11.3□□□□□ -0.6
USP6-204ENST00000572949 PPP4R3AQ6IN85 833 aa11.3□□□□□ -0.6
USP6-204ENST00000572949 BRPF1P55201 1214 aaPredicted RBP11.3□□□□□ -0.6
USP6-204ENST00000572949 HSP90B2PQ58FF3 399 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms