RNA–Protein interactions for RNA: ENST00000571562.1

NPLOC4-205, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-205ENST00000571562 PPP4CP60510 307 aa8.22□□□□□ -1.09
NPLOC4-205ENST00000571562 MTMR2Q13614 643 aa8.22□□□□□ -1.09
NPLOC4-205ENST00000571562 GRIPAP1Q4V328 841 aa8.22□□□□□ -1.09
NPLOC4-205ENST00000571562 THSD4Q6ZMP0 1018 aa8.22□□□□□ -1.09
NPLOC4-205ENST00000571562 CDAN1Q8IWY9 1227 aa8.22□□□□□ -1.09
NPLOC4-205ENST00000571562 MTMR14Q8NCE2 650 aa8.22□□□□□ -1.09
NPLOC4-205ENST00000571562 NECTIN2Q92692 538 aa8.22□□□□□ -1.09
NPLOC4-205ENST00000571562 KCTD12Q96CX2 325 aaKnown RBP8.22□□□□□ -1.09
NPLOC4-205ENST00000571562 POM121Q96HA1 1249 aa8.22□□□□□ -1.09
NPLOC4-205ENST00000571562 ZMYND15Q9H091 742 aa8.22□□□□□ -1.09
NPLOC4-205ENST00000571562 WBP1LQ9NX94 342 aa8.22□□□□□ -1.09
NPLOC4-205ENST00000571562 TSR3Q9UJK0 312 aaKnown RBP8.22□□□□□ -1.09
NPLOC4-205ENST00000571562 CFAP99D6REC4 459 aa8.21□□□□□ -1.1
NPLOC4-205ENST00000571562 TSC1Q92574 1164 aa8.21□□□□□ -1.1
NPLOC4-205ENST00000571562 SLC27A5Q9Y2P5 690 aa8.21□□□□□ -1.1
NPLOC4-205ENST00000571562 RNF19BQ6ZMZ0 732 aa8.2□□□□□ -1.1
NPLOC4-205ENST00000571562 TMEM259Q4ZIN3 620 aa8.19□□□□□ -1.1
NPLOC4-205ENST00000571562 BLOC1S3Q6QNY0 202 aa8.19□□□□□ -1.1
NPLOC4-205ENST00000571562 BANK1Q8NDB2 785 aa8.19□□□□□ -1.1
NPLOC4-205ENST00000571562 PRR14Q9BWN1 585 aa8.19□□□□□ -1.1
NPLOC4-205ENST00000571562 PCDHB3Q9Y5E6 796 aa8.19□□□□□ -1.1
NPLOC4-205ENST00000571562 HMX1Q9NP08 348 aaPredicted RBP8.18□□□□□ -1.1
NPLOC4-205ENST00000571562 COG6Q9Y2V7 657 aa8.17□□□□□ -1.1
NPLOC4-205ENST00000571562 CTDSPL2Q05D32 466 aa8.16□□□□□ -1.1
NPLOC4-205ENST00000571562 RETREG3Q86VR2 466 aa8.16□□□□□ -1.1
NPLOC4-205ENST00000571562 HELBQ8NG08 1087 aaPredicted RBP8.16□□□□□ -1.1
NPLOC4-205ENST00000571562 PRR7Q8TB68 274 aa8.16□□□□□ -1.1
NPLOC4-205ENST00000571562 ARID3CA6NKF2 412 aa8.15□□□□□ -1.1
NPLOC4-205ENST00000571562 TLL1O43897 1013 aa8.15□□□□□ -1.1
NPLOC4-205ENST00000571562 COPS2P61201 443 aa8.15□□□□□ -1.1
NPLOC4-205ENST00000571562 PROSER2Q86WR7 435 aaPredicted RBP8.15□□□□□ -1.1
NPLOC4-205ENST00000571562 LRRN4Q8WUT4 740 aa8.15□□□□□ -1.1
NPLOC4-205ENST00000571562 Q3C1V9 767 aa8.14□□□□□ -1.11
NPLOC4-205ENST00000571562 C1orf115Q9H7X2 142 aa8.14□□□□□ -1.11
NPLOC4-205ENST00000571562 GDPD2Q9HCC8 539 aa8.14□□□□□ -1.11
NPLOC4-205ENST00000571562 TBC1D2BQ9UPU7 963 aa8.14□□□□□ -1.11
NPLOC4-205ENST00000571562 A6NJR5 290 aa8.13□□□□□ -1.11
NPLOC4-205ENST00000571562 PER1O15534 1290 aaPredicted RBP8.13□□□□□ -1.11
NPLOC4-205ENST00000571562 PTPN5P54829 565 aa8.13□□□□□ -1.11
NPLOC4-205ENST00000571562 SCUBE3Q8IX30 993 aa8.13□□□□□ -1.11
NPLOC4-205ENST00000571562 GJD4Q96KN9 370 aaPredicted RBP8.13□□□□□ -1.11
NPLOC4-205ENST00000571562 RAD21O60216 631 aa8.12□□□□□ -1.11
NPLOC4-205ENST00000571562 GPR37L1O60883 481 aa8.12□□□□□ -1.11
NPLOC4-205ENST00000571562 NR1I2O75469 434 aa8.12□□□□□ -1.11
NPLOC4-205ENST00000571562 THAP11Q96EK4 314 aa8.12□□□□□ -1.11
NPLOC4-205ENST00000571562 TRIM34Q9BYJ4 488 aa8.12□□□□□ -1.11
NPLOC4-205ENST00000571562 PRDM9Q9NQV7 894 aa8.12□□□□□ -1.11
NPLOC4-205ENST00000571562 SOCS7O14512 581 aa8.11□□□□□ -1.11
NPLOC4-205ENST00000571562 BRICD5Q6PL45 260 aa8.11□□□□□ -1.11
NPLOC4-205ENST00000571562 EPS8L1Q8TE68 723 aa8.11□□□□□ -1.11
NPLOC4-205ENST00000571562 TRAK2O60296 914 aa8.1□□□□□ -1.11
NPLOC4-205ENST00000571562 ABL2P42684 1182 aa8.1□□□□□ -1.11
NPLOC4-205ENST00000571562 FNBP4Q8N3X1 1017 aaPredicted RBP8.1□□□□□ -1.11
NPLOC4-205ENST00000571562 MTRQ99707 1265 aa8.1□□□□□ -1.11
NPLOC4-205ENST00000571562 USB1Q9BQ65 265 aaKnown RBP8.1□□□□□ -1.11
NPLOC4-205ENST00000571562 MYT1LQ9UL68 1186 aa8.1□□□□□ -1.11
NPLOC4-205ENST00000571562 FMNL1O95466 1100 aaPredicted RBP8.09□□□□□ -1.11
NPLOC4-205ENST00000571562 SALL2Q9Y467 1007 aaPredicted RBP8.08□□□□□ -1.12
NPLOC4-205ENST00000571562 NDUFB9Q9Y6M9 179 aa8.08□□□□□ -1.12
NPLOC4-205ENST00000571562 APBB1O00213 710 aa8.07□□□□□ -1.12
NPLOC4-205ENST00000571562 NR6A1Q15406 480 aa8.07□□□□□ -1.12
NPLOC4-205ENST00000571562 JUNDP17535 347 aa8.06□□□□□ -1.12
NPLOC4-205ENST00000571562 DESI1Q6ICB0 168 aa8.06□□□□□ -1.12
NPLOC4-205ENST00000571562 NYAP1Q6ZVC0 841 aa8.06□□□□□ -1.12
NPLOC4-205ENST00000571562 ZNF516Q92618 1163 aa8.06□□□□□ -1.12
NPLOC4-205ENST00000571562 SPSB2Q99619 263 aa8.06□□□□□ -1.12
NPLOC4-205ENST00000571562 MAP10Q9P2G4 905 aa8.06□□□□□ -1.12
NPLOC4-205ENST00000571562 ZPR1O75312 459 aa8.05□□□□□ -1.12
NPLOC4-205ENST00000571562 IRF5Q13568 498 aa8.05□□□□□ -1.12
NPLOC4-205ENST00000571562 MSS51Q4VC12 460 aa8.05□□□□□ -1.12
NPLOC4-205ENST00000571562 LYPD8Q6UX82 237 aa8.05□□□□□ -1.12
NPLOC4-205ENST00000571562 FAM160A2Q8N612 972 aaPredicted RBP8.05□□□□□ -1.12
NPLOC4-205ENST00000571562 ARID3AQ99856 593 aa8.05□□□□□ -1.12
NPLOC4-205ENST00000571562 POM121CA8CG34 1229 aa8.04□□□□□ -1.12
NPLOC4-205ENST00000571562 ADH1BP00325 375 aa8.04□□□□□ -1.12
NPLOC4-205ENST00000571562 TJAP1Q5JTD0 557 aa8.04□□□□□ -1.12
NPLOC4-205ENST00000571562 ZNF777Q9ULD5 760 aaPredicted RBP8.04□□□□□ -1.12
NPLOC4-205ENST00000571562 DXOO77932 396 aaKnown RBP8.03□□□□□ -1.12
NPLOC4-205ENST00000571562 F12P00748 615 aaPredicted RBP8.03□□□□□ -1.12
NPLOC4-205ENST00000571562 PTPRNQ16849 979 aa8.03□□□□□ -1.12
NPLOC4-205ENST00000571562 CCDC82Q8N4S0 544 aa8.03□□□□□ -1.12
NPLOC4-205ENST00000571562 RNF166Q96A37 237 aaPredicted RBP8.03□□□□□ -1.12
NPLOC4-205ENST00000571562 IL21Q9HBE4 155 aa8.02□□□□□ -1.13
NPLOC4-205ENST00000571562 ZNF330Q9Y3S2 320 aaPredicted RBP8.02□□□□□ -1.13
NPLOC4-205ENST00000571562 MMP16P51512 607 aa8.01□□□□□ -1.13
NPLOC4-205ENST00000571562 SPNS2Q8IVW8 549 aa8.01□□□□□ -1.13
NPLOC4-205ENST00000571562 NKX2-3Q8TAU0 364 aa8.01□□□□□ -1.13
NPLOC4-205ENST00000571562 PRM3Q9NNZ6 103 aa8.01□□□□□ -1.13
NPLOC4-205ENST00000571562 CCNYL3P0C7X3 344 aa8□□□□□ -1.13
NPLOC4-205ENST00000571562 NUDT12Q9BQG2 462 aa8□□□□□ -1.13
NPLOC4-205ENST00000571562 CTHP32929 405 aa7.99□□□□□ -1.13
NPLOC4-205ENST00000571562 VAC14Q08AM6 782 aa7.99□□□□□ -1.13
NPLOC4-205ENST00000571562 PLSCR2Q9NRY7 297 aa7.99□□□□□ -1.13
NPLOC4-205ENST00000571562 S1PR4O95977 384 aa7.98□□□□□ -1.13
NPLOC4-205ENST00000571562 WWC1Q8IX03 1113 aa7.98□□□□□ -1.13
NPLOC4-205ENST00000571562 GLMNQ92990 594 aa7.98□□□□□ -1.13
NPLOC4-205ENST00000571562 SLC6A16Q9GZN6 736 aa7.98□□□□□ -1.13
NPLOC4-205ENST00000571562 ADAMTS19Q8TE59 1207 aa7.97□□□□□ -1.13
NPLOC4-205ENST00000571562 HCSTQ9UBK5 93 aa7.96□□□□□ -1.14
NPLOC4-205ENST00000571562 FKBPLQ9UIM3 349 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms