RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 PPLO60437 1756 aa26.68■■□□□ 1.86
SPNS2-203ENST00000570979 VGFO15240 615 aaPredicted RBP26.68■■□□□ 1.86
SPNS2-203ENST00000570979 RPGRIP1LQ68CZ1 1315 aa26.67■■□□□ 1.86
SPNS2-203ENST00000570979 SLC24A1O60721 1099 aa26.66■■□□□ 1.86
SPNS2-203ENST00000570979 C19orf44Q9H6X5 657 aa26.66■■□□□ 1.86
SPNS2-203ENST00000570979 SETD1AO15047 1707 aaKnown RBP26.66■■□□□ 1.86
SPNS2-203ENST00000570979 MRS2Q9HD23 443 aa26.63■■□□□ 1.85
SPNS2-203ENST00000570979 NEFLP07196 543 aa26.61■■□□□ 1.85
SPNS2-203ENST00000570979 POLR3GLQ9BT43 218 aa26.61■■□□□ 1.85
SPNS2-203ENST00000570979 CADPS2Q86UW7 1296 aa26.61■■□□□ 1.85
SPNS2-203ENST00000570979 ADGRF5Q8IZF2 1346 aa26.6■■□□□ 1.85
SPNS2-203ENST00000570979 ATF3P18847 181 aa26.6■■□□□ 1.85
SPNS2-203ENST00000570979 HNRNPUQ00839 825 aaKnown RBP eCLIP26.6■■□□□ 1.85
SPNS2-203ENST00000570979 RALBP1Q15311 655 aa26.59■■□□□ 1.85
SPNS2-203ENST00000570979 TMF1P82094 1093 aa26.57■■□□□ 1.84
SPNS2-203ENST00000570979 SUPT16HQ9Y5B9 1047 aaKnown RBP26.57■■□□□ 1.84
SPNS2-203ENST00000570979 CDCA8Q53HL2 280 aa26.56■■□□□ 1.84
SPNS2-203ENST00000570979 PHLPP1O60346 1717 aa26.56■■□□□ 1.84
SPNS2-203ENST00000570979 IFT172Q9UG01 1749 aa26.56■■□□□ 1.84
SPNS2-203ENST00000570979 KIAA1210Q9ULL0 1709 aa26.56■■□□□ 1.84
SPNS2-203ENST00000570979 NBPF1Q3BBV0 1214 aa26.56■■□□□ 1.84
SPNS2-203ENST00000570979 ROBO2Q9HCK4 1378 aa26.55■■□□□ 1.84
SPNS2-203ENST00000570979 DCCP43146 1447 aa26.54■■□□□ 1.84
SPNS2-203ENST00000570979 ADGRL3Q9HAR2 1447 aa26.53■■□□□ 1.84
SPNS2-203ENST00000570979 NALCNQ8IZF0 1738 aa26.53■■□□□ 1.84
SPNS2-203ENST00000570979 EIF3AQ14152 1382 aaKnown RBP26.52■■□□□ 1.84
SPNS2-203ENST00000570979 MYOM2P54296 1465 aa26.51■■□□□ 1.83
SPNS2-203ENST00000570979 COL16A1Q07092 1604 aaPredicted RBP26.51■■□□□ 1.83
SPNS2-203ENST00000570979 PTCH1Q13635 1447 aa26.51■■□□□ 1.83
SPNS2-203ENST00000570979 BRINP3Q76B58 766 aa26.51■■□□□ 1.83
SPNS2-203ENST00000570979 PHF23Q9BUL5 403 aaPredicted RBP26.51■■□□□ 1.83
SPNS2-203ENST00000570979 MST1RQ04912 1400 aa26.5■■□□□ 1.83
SPNS2-203ENST00000570979 SOCS7O14512 581 aa26.49■■□□□ 1.83
SPNS2-203ENST00000570979 TESK2Q96S53 571 aa26.48■■□□□ 1.83
SPNS2-203ENST00000570979 ZBED9Q6R2W3 1325 aa26.47■■□□□ 1.83
SPNS2-203ENST00000570979 AHDC1Q5TGY3 1603 aaPredicted RBP26.47■■□□□ 1.83
SPNS2-203ENST00000570979 BRD4O60885 1362 aaPredicted RBP26.46■■□□□ 1.83
SPNS2-203ENST00000570979 FAM9BQ8IZU0 186 aa26.46■■□□□ 1.83
SPNS2-203ENST00000570979 RGS17Q9UGC6 210 aaPredicted RBP26.46■■□□□ 1.83
SPNS2-203ENST00000570979 ASXL1Q8IXJ9 1541 aa26.45■■□□□ 1.83
SPNS2-203ENST00000570979 PIK3C2GO75747 1445 aa26.45■■□□□ 1.83
SPNS2-203ENST00000570979 MYBBP1AQ9BQG0 1328 aaKnown RBP26.45■■□□□ 1.83
SPNS2-203ENST00000570979 JCADQ9P266 1359 aa26.44■■□□□ 1.82
SPNS2-203ENST00000570979 TMEM132EQ6IEE7 984 aa26.43■■□□□ 1.82
SPNS2-203ENST00000570979 TMC1Q8TDI8 760 aa26.43■■□□□ 1.82
SPNS2-203ENST00000570979 STK26Q9P289 416 aa26.42■■□□□ 1.82
SPNS2-203ENST00000570979 CCDC184Q52MB2 194 aa26.41■■□□□ 1.82
SPNS2-203ENST00000570979 DDX17Q92841 729 aaKnown RBP26.39■■□□□ 1.82
SPNS2-203ENST00000570979 LRPPRCP42704 1394 aaKnown RBP26.39■■□□□ 1.82
SPNS2-203ENST00000570979 C1orf167Q5SNV9 1468 aa26.39■■□□□ 1.81
SPNS2-203ENST00000570979 NRXN1Q9ULB1 1477 aa26.39■■□□□ 1.81
SPNS2-203ENST00000570979 ERICH6BQ5W0A0 696 aa26.38■■□□□ 1.81
SPNS2-203ENST00000570979 WAPLQ7Z5K2 1190 aa26.38■■□□□ 1.81
SPNS2-203ENST00000570979 TECPR2O15040 1411 aa26.37■■□□□ 1.81
SPNS2-203ENST00000570979 NHSL1Q5SYE7 1610 aa26.37■■□□□ 1.81
SPNS2-203ENST00000570979 C14orf93Q9H972 538 aaKnown RBP26.36■■□□□ 1.81
SPNS2-203ENST00000570979 FKBP8Q14318 412 aa26.35■■□□□ 1.81
SPNS2-203ENST00000570979 CFAP70Q5T0N1 1121 aa26.35■■□□□ 1.81
SPNS2-203ENST00000570979 NLRP13Q86W25 1043 aa26.35■■□□□ 1.81
SPNS2-203ENST00000570979 ABCC11Q96J66 1382 aa26.35■■□□□ 1.81
SPNS2-203ENST00000570979 PLEKHH1Q9ULM0 1364 aa26.35■■□□□ 1.81
SPNS2-203ENST00000570979 PARD3Q8TEW0 1356 aa26.34■■□□□ 1.81
SPNS2-203ENST00000570979 LRP6O75581 1613 aa26.34■■□□□ 1.81
SPNS2-203ENST00000570979 PER1O15534 1290 aaPredicted RBP26.34■■□□□ 1.81
SPNS2-203ENST00000570979 YTHDC2Q9H6S0 1430 aaKnown RBP26.34■■□□□ 1.81
SPNS2-203ENST00000570979 ORAI2Q96SN7 254 aa26.33■■□□□ 1.81
SPNS2-203ENST00000570979 KNDC1Q76NI1 1749 aa26.33■■□□□ 1.81
SPNS2-203ENST00000570979 SHPRHQ149N8 1683 aa26.33■■□□□ 1.81
SPNS2-203ENST00000570979 PNISRQ8TF01 805 aaKnown RBP26.33■■□□□ 1.8
SPNS2-203ENST00000570979 POTEAQ6S8J7 498 aa26.3■■□□□ 1.8
SPNS2-203ENST00000570979 INSRP06213 1382 aa26.3■■□□□ 1.8
SPNS2-203ENST00000570979 SPATA31A6Q5VVP1 1343 aa26.29■■□□□ 1.8
SPNS2-203ENST00000570979 CDC42BPGQ6DT37 1551 aa26.29■■□□□ 1.8
SPNS2-203ENST00000570979 PANK3Q9H999 370 aa26.28■■□□□ 1.8
SPNS2-203ENST00000570979 SBNO2Q9Y2G9 1366 aa26.27■■□□□ 1.8
SPNS2-203ENST00000570979 NUTM2FA1L443 756 aa26.24■■□□□ 1.79
SPNS2-203ENST00000570979 NUTM2BA6NNL0 878 aaPredicted RBP26.24■■□□□ 1.79
SPNS2-203ENST00000570979 NUTM2EB1AL46 878 aaPredicted RBP26.24■■□□□ 1.79
SPNS2-203ENST00000570979 NUTM2AQ8IVF1 878 aaPredicted RBP26.24■■□□□ 1.79
SPNS2-203ENST00000570979 LRRC59Q96AG4 307 aaKnown RBP26.24■■□□□ 1.79
SPNS2-203ENST00000570979 ANP32EQ9BTT0 268 aa26.24■■□□□ 1.79
SPNS2-203ENST00000570979 KNSTRNQ9Y448 316 aa26.24■■□□□ 1.79
SPNS2-203ENST00000570979 SIRT1Q96EB6 747 aa26.22■■□□□ 1.79
SPNS2-203ENST00000570979 PNPLA6Q8IY17 1366 aa26.22■■□□□ 1.79
SPNS2-203ENST00000570979 NPC1L1Q9UHC9 1359 aa26.22■■□□□ 1.79
SPNS2-203ENST00000570979 ADGRB1O14514 1584 aa26.21■■□□□ 1.79
SPNS2-203ENST00000570979 ESCO1Q5FWF5 840 aa26.2■■□□□ 1.79
SPNS2-203ENST00000570979 MEX3CQ5U5Q3 659 aaKnown RBP26.2■■□□□ 1.79
SPNS2-203ENST00000570979 SOS2Q07890 1332 aaPredicted RBP26.2■■□□□ 1.79
SPNS2-203ENST00000570979 SMG6Q86US8 1419 aaKnown RBP26.19■■□□□ 1.78
SPNS2-203ENST00000570979 SAFB2Q14151 953 aaKnown RBP eCLIP26.18■■□□□ 1.78
SPNS2-203ENST00000570979 PRAM1Q96QH2 718 aa26.18■■□□□ 1.78
SPNS2-203ENST00000570979 CNGB1Q14028 1251 aaPredicted RBP26.18■■□□□ 1.78
SPNS2-203ENST00000570979 FMN2Q9NZ56 1722 aa26.17■■□□□ 1.78
SPNS2-203ENST00000570979 BCL11AQ9H165 835 aa26.15■■□□□ 1.78
SPNS2-203ENST00000570979 DLC1Q96QB1 1528 aa26.15■■□□□ 1.78
SPNS2-203ENST00000570979 XPCQ01831 940 aaPredicted RBP26.14■■□□□ 1.78
SPNS2-203ENST00000570979 PUS7Q96PZ0 661 aaKnown RBP26.14■■□□□ 1.78
SPNS2-203ENST00000570979 TRAK1Q9UPV9 953 aa26.14■■□□□ 1.78
SPNS2-203ENST00000570979 FOXO3O43524 673 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms