RNA–Protein interactions for RNA: ENST00000570279.1

CFDP1-210, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-210ENST00000570279 SLC6A16Q9GZN6 736 aa6.4□□□□□ -1.38
CFDP1-210ENST00000570279 BRICD5Q6PL45 260 aa6.39□□□□□ -1.39
CFDP1-210ENST00000570279 TBC1D2Q9BYX2 928 aa6.39□□□□□ -1.39
CFDP1-210ENST00000570279 GPBP1L1Q9HC44 474 aaPredicted RBP6.39□□□□□ -1.39
CFDP1-210ENST00000570279 MOXD2PA6NHM9 499 aa6.38□□□□□ -1.39
CFDP1-210ENST00000570279 RNF223E7ERA6 249 aa6.38□□□□□ -1.39
CFDP1-210ENST00000570279 FDX1P10109 184 aa6.38□□□□□ -1.39
CFDP1-210ENST00000570279 NDUFV2P19404 249 aa6.38□□□□□ -1.39
CFDP1-210ENST00000570279 DIXDC1Q155Q3 683 aa6.38□□□□□ -1.39
CFDP1-210ENST00000570279 KDM4CQ9H3R0 1056 aa6.38□□□□□ -1.39
CFDP1-210ENST00000570279 FAM160A2Q8N612 972 aaPredicted RBP6.37□□□□□ -1.39
CFDP1-210ENST00000570279 PRDM9Q9NQV7 894 aa6.37□□□□□ -1.39
CFDP1-210ENST00000570279 SCRIBQ14160 1630 aa6.36□□□□□ -1.39
CFDP1-210ENST00000570279 PPEF1O14829 653 aaPredicted RBP6.36□□□□□ -1.39
CFDP1-210ENST00000570279 MSS51Q4VC12 460 aa6.36□□□□□ -1.39
CFDP1-210ENST00000570279 ANKLE1Q8NAG6 615 aa6.36□□□□□ -1.39
CFDP1-210ENST00000570279 USB1Q9BQ65 265 aaKnown RBP6.36□□□□□ -1.39
CFDP1-210ENST00000570279 PCDHGC3Q9UN70 934 aa6.36□□□□□ -1.39
CFDP1-210ENST00000570279 C6orf229H3BNL8 230 aa6.35□□□□□ -1.39
CFDP1-210ENST00000570279 GJA5P36382 358 aa6.35□□□□□ -1.39
CFDP1-210ENST00000570279 MYSM1Q5VVJ2 828 aa6.35□□□□□ -1.39
CFDP1-210ENST00000570279 RSBN1LQ6PCB5 846 aaPredicted RBP6.35□□□□□ -1.39
CFDP1-210ENST00000570279 SYMPKQ92797 1274 aaKnown RBP6.35□□□□□ -1.39
CFDP1-210ENST00000570279 NEUROD2Q15784 382 aa6.34□□□□□ -1.39
CFDP1-210ENST00000570279 RIC3Q7Z5B4 369 aa6.34□□□□□ -1.39
CFDP1-210ENST00000570279 RETREG3Q86VR2 466 aa6.34□□□□□ -1.39
CFDP1-210ENST00000570279 PPARGC1BQ86YN6 1023 aaKnown RBP6.34□□□□□ -1.39
CFDP1-210ENST00000570279 DDRGK1Q96HY6 314 aa6.34□□□□□ -1.39
CFDP1-210ENST00000570279 PRKD2Q9BZL6 878 aa6.34□□□□□ -1.39
CFDP1-210ENST00000570279 FAM117AQ9C073 453 aa6.34□□□□□ -1.39
CFDP1-210ENST00000570279 SPTLC1O15269 473 aa6.33□□□□□ -1.4
CFDP1-210ENST00000570279 PRKCSHP14314 528 aaPredicted RBP6.33□□□□□ -1.4
CFDP1-210ENST00000570279 FCF1Q9Y324 198 aaKnown RBP6.33□□□□□ -1.4
CFDP1-210ENST00000570279 MMP16P51512 607 aa6.32□□□□□ -1.4
CFDP1-210ENST00000570279 MTMR2Q13614 643 aa6.32□□□□□ -1.4
CFDP1-210ENST00000570279 CSPP1Q1MSJ5 1256 aa6.32□□□□□ -1.4
CFDP1-210ENST00000570279 RSPH6AQ9H0K4 717 aa6.32□□□□□ -1.4
CFDP1-210ENST00000570279 PCDHB15Q9Y5E8 787 aa6.32□□□□□ -1.4
CFDP1-210ENST00000570279 V9GY48 417 aaPredicted RBP6.32□□□□□ -1.4
CFDP1-210ENST00000570279 BAZ1AQ9NRL2 1556 aaPredicted RBP6.31□□□□□ -1.4
CFDP1-210ENST00000570279 PLEKHG3A1L390 1219 aa6.31□□□□□ -1.4
CFDP1-210ENST00000570279 DXOO77932 396 aaKnown RBP6.31□□□□□ -1.4
CFDP1-210ENST00000570279 CLK2P49760 499 aaKnown RBP6.31□□□□□ -1.4
CFDP1-210ENST00000570279 BRPF1P55201 1214 aaPredicted RBP6.31□□□□□ -1.4
CFDP1-210ENST00000570279 PLA2G2CQ5R387 149 aa6.31□□□□□ -1.4
CFDP1-210ENST00000570279 EMID1Q96A84 441 aaPredicted RBP6.31□□□□□ -1.4
CFDP1-210ENST00000570279 ZBTB3Q9H5J0 574 aa6.31□□□□□ -1.4
CFDP1-210ENST00000570279 LIMD1Q9UGP4 676 aa6.31□□□□□ -1.4
CFDP1-210ENST00000570279 SPDYE5A6NIY4 337 aa6.3□□□□□ -1.4
CFDP1-210ENST00000570279 JUNDP17535 347 aa6.3□□□□□ -1.4
CFDP1-210ENST00000570279 SLC19A1P41440 591 aa6.3□□□□□ -1.4
CFDP1-210ENST00000570279 PRR7Q8TB68 274 aa6.3□□□□□ -1.4
CFDP1-210ENST00000570279 POLR3EQ9NVU0 708 aa6.3□□□□□ -1.4
CFDP1-210ENST00000570279 EEA1Q15075 1411 aa6.3□□□□□ -1.4
CFDP1-210ENST00000570279 MROH2BQ7Z745 1585 aa6.3□□□□□ -1.4
CFDP1-210ENST00000570279 CECR2Q9BXF3 1484 aa6.29□□□□□ -1.4
CFDP1-210ENST00000570279 WRNQ14191 1432 aaPredicted RBP eCLIP6.29□□□□□ -1.4
CFDP1-210ENST00000570279 TUSC1Q2TAM9 212 aa6.29□□□□□ -1.4
CFDP1-210ENST00000570279 PRPF38BQ5VTL8 546 aaKnown RBP6.29□□□□□ -1.4
CFDP1-210ENST00000570279 LIAT1Q6ZQX7 453 aa6.29□□□□□ -1.4
CFDP1-210ENST00000570279 CABLES1Q8TDN4 633 aa6.29□□□□□ -1.4
CFDP1-210ENST00000570279 QPCTQ16769 361 aa6.28□□□□□ -1.4
CFDP1-210ENST00000570279 SH3D19Q5HYK7 790 aa6.28□□□□□ -1.4
CFDP1-210ENST00000570279 NUTM2BA6NNL0 878 aaPredicted RBP6.27□□□□□ -1.41
CFDP1-210ENST00000570279 NUTM2EB1AL46 878 aaPredicted RBP6.27□□□□□ -1.41
CFDP1-210ENST00000570279 SKIV2LQ15477 1246 aaKnown RBP6.27□□□□□ -1.41
CFDP1-210ENST00000570279 NUTM2DQ5VT03 806 aaPredicted RBP6.27□□□□□ -1.41
CFDP1-210ENST00000570279 SPRYD7Q5W111 196 aa6.27□□□□□ -1.41
CFDP1-210ENST00000570279 NUTM2AQ8IVF1 878 aaPredicted RBP6.27□□□□□ -1.41
CFDP1-210ENST00000570279 CCDC24Q8N4L8 307 aa6.27□□□□□ -1.41
CFDP1-210ENST00000570279 IL27Q8NEV9 243 aa6.27□□□□□ -1.41
CFDP1-210ENST00000570279 IRX2Q9BZI1 471 aaPredicted RBP6.27□□□□□ -1.41
CFDP1-210ENST00000570279 CFAP99D6REC4 459 aa6.26□□□□□ -1.41
CFDP1-210ENST00000570279 ZBTB24O43167 697 aaPredicted RBP6.26□□□□□ -1.41
CFDP1-210ENST00000570279 LILRB3O75022 631 aa6.26□□□□□ -1.41
CFDP1-210ENST00000570279 RPIAP49247 311 aa6.26□□□□□ -1.41
CFDP1-210ENST00000570279 DESI1Q6ICB0 168 aa6.26□□□□□ -1.41
CFDP1-210ENST00000570279 ZNF598Q86UK7 904 aaKnown RBP6.26□□□□□ -1.41
CFDP1-210ENST00000570279 NUDT12Q9BQG2 462 aa6.26□□□□□ -1.41
CFDP1-210ENST00000570279 ATP1B4Q9UN42 357 aaPredicted RBP6.26□□□□□ -1.41
CFDP1-210ENST00000570279 CCNYL3P0C7X3 344 aa6.25□□□□□ -1.41
CFDP1-210ENST00000570279 PTPRNQ16849 979 aa6.25□□□□□ -1.41
CFDP1-210ENST00000570279 ZNF697Q5TEC3 545 aa6.25□□□□□ -1.41
CFDP1-210ENST00000570279 TSC1Q92574 1164 aa6.25□□□□□ -1.41
CFDP1-210ENST00000570279 TOP2AP11388 1531 aaKnown RBP6.25□□□□□ -1.41
CFDP1-210ENST00000570279 TNIKQ9UKE5 1360 aa6.24□□□□□ -1.41
CFDP1-210ENST00000570279 RTL5Q5HYW3 569 aaPredicted RBP6.24□□□□□ -1.41
CFDP1-210ENST00000570279 PROCA1Q8NCQ7 364 aaPredicted RBP6.24□□□□□ -1.41
CFDP1-210ENST00000570279 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.24□□□□□ -1.41
CFDP1-210ENST00000570279 EIF4G1Q04637 1599 aaKnown RBP6.23□□□□□ -1.41
CFDP1-210ENST00000570279 CD2BP2O95400 341 aaKnown RBP6.23□□□□□ -1.41
CFDP1-210ENST00000570279 TRIM32Q13049 653 aa6.23□□□□□ -1.41
CFDP1-210ENST00000570279 FAM9AQ8IZU1 332 aaPredicted RBP6.23□□□□□ -1.41
CFDP1-210ENST00000570279 GOPCQ9HD26 462 aa6.23□□□□□ -1.41
CFDP1-210ENST00000570279 GFRA3O60609 400 aa6.22□□□□□ -1.41
CFDP1-210ENST00000570279 LYPD8Q6UX82 237 aa6.22□□□□□ -1.41
CFDP1-210ENST00000570279 HELBQ8NG08 1087 aaPredicted RBP6.22□□□□□ -1.41
CFDP1-210ENST00000570279 PDZRN3Q9UPQ7 1066 aa6.22□□□□□ -1.41
CFDP1-210ENST00000570279 PER1O15534 1290 aaPredicted RBP6.21□□□□□ -1.42
CFDP1-210ENST00000570279 LAPTM4AQ15012 233 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms