RNA–Protein interactions for RNA: ENST00000570188.1

RBFOX1-220, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-220ENST00000570188 IQGAP1P46940 1657 aa13.69□□□□□ -0.22
RBFOX1-220ENST00000570188 PDAP1Q13442 181 aaKnown RBP13.68□□□□□ -0.22
RBFOX1-220ENST00000570188 ESF1Q9H501 851 aaKnown RBP13.68□□□□□ -0.22
RBFOX1-220ENST00000570188 PCDHB8Q9UN66 801 aa13.68□□□□□ -0.22
RBFOX1-220ENST00000570188 PCDHB13Q9Y5F0 798 aa13.68□□□□□ -0.22
RBFOX1-220ENST00000570188 ROCK2O75116 1388 aaKnown RBP13.68□□□□□ -0.22
RBFOX1-220ENST00000570188 NEXMIFQ5QGS0 1516 aa13.67□□□□□ -0.22
RBFOX1-220ENST00000570188 USP47Q96K76 1375 aa13.67□□□□□ -0.22
RBFOX1-220ENST00000570188 STAC3Q96MF2 364 aa13.66□□□□□ -0.22
RBFOX1-220ENST00000570188 PRKAR2AP13861 404 aaKnown RBP13.65□□□□□ -0.22
RBFOX1-220ENST00000570188 CARD11Q9BXL7 1154 aa13.65□□□□□ -0.22
RBFOX1-220ENST00000570188 SLC52A1Q9NWF4 448 aa13.65□□□□□ -0.22
RBFOX1-220ENST00000570188 CCDC61Q9Y6R9 512 aa13.65□□□□□ -0.22
RBFOX1-220ENST00000570188 GPRASP1Q5JY77 1395 aa13.65□□□□□ -0.22
RBFOX1-220ENST00000570188 RIMS1Q86UR5 1692 aaKnown RBP13.64□□□□□ -0.23
RBFOX1-220ENST00000570188 NRXN1Q9ULB1 1477 aa13.64□□□□□ -0.23
RBFOX1-220ENST00000570188 KDM5AP29375 1690 aaKnown RBP13.63□□□□□ -0.23
RBFOX1-220ENST00000570188 ZMYM3Q14202 1370 aa13.63□□□□□ -0.23
RBFOX1-220ENST00000570188 FBXO31Q5XUX0 539 aaPredicted RBP13.63□□□□□ -0.23
RBFOX1-220ENST00000570188 RPGRIP1LQ68CZ1 1315 aa13.62□□□□□ -0.23
RBFOX1-220ENST00000570188 IDI1Q13907 227 aa13.61□□□□□ -0.23
RBFOX1-220ENST00000570188 UBR1Q8IWV7 1749 aa13.61□□□□□ -0.23
RBFOX1-220ENST00000570188 CADPS2Q86UW7 1296 aa13.6□□□□□ -0.23
RBFOX1-220ENST00000570188 SETBP1Q9Y6X0 1596 aa13.6□□□□□ -0.23
RBFOX1-220ENST00000570188 ADAMTSL3P82987 1691 aa13.59□□□□□ -0.23
RBFOX1-220ENST00000570188 PIK3C2GO75747 1445 aa13.59□□□□□ -0.23
RBFOX1-220ENST00000570188 PSEN1P49768 467 aa13.59□□□□□ -0.23
RBFOX1-220ENST00000570188 NBPF1Q3BBV0 1214 aa13.59□□□□□ -0.23
RBFOX1-220ENST00000570188 ZNF579Q8NAF0 562 aaKnown RBP13.59□□□□□ -0.23
RBFOX1-220ENST00000570188 ADGRF5Q8IZF2 1346 aa13.59□□□□□ -0.23
RBFOX1-220ENST00000570188 TNRQ92752 1358 aa13.58□□□□□ -0.23
RBFOX1-220ENST00000570188 A2ML1A8K2U0 1454 aa13.57□□□□□ -0.24
RBFOX1-220ENST00000570188 FXR2P51116 673 aaKnown RBP eCLIP13.57□□□□□ -0.24
RBFOX1-220ENST00000570188 DDX10Q13206 875 aaKnown RBP13.57□□□□□ -0.24
RBFOX1-220ENST00000570188 WASHC2AQ641Q2 1341 aa13.57□□□□□ -0.24
RBFOX1-220ENST00000570188 MYO3AQ8NEV4 1616 aa13.57□□□□□ -0.24
RBFOX1-220ENST00000570188 CCDC7Q96M83 1385 aa13.57□□□□□ -0.24
RBFOX1-220ENST00000570188 SCAF11Q99590 1463 aaKnown RBP13.56□□□□□ -0.24
RBFOX1-220ENST00000570188 MFRPQ9BY79 579 aa13.56□□□□□ -0.24
RBFOX1-220ENST00000570188 ZFYVE9O95405 1425 aa13.56□□□□□ -0.24
RBFOX1-220ENST00000570188 ARHGEF28Q8N1W1 1705 aaKnown RBP13.54□□□□□ -0.24
RBFOX1-220ENST00000570188 NLRP1Q9C000 1473 aa13.54□□□□□ -0.24
RBFOX1-220ENST00000570188 ADGRB1O14514 1584 aa13.54□□□□□ -0.24
RBFOX1-220ENST00000570188 QRICH2Q9H0J4 1663 aa13.53□□□□□ -0.24
RBFOX1-220ENST00000570188 SETD1AO15047 1707 aaKnown RBP13.53□□□□□ -0.24
RBFOX1-220ENST00000570188 ST20-MTHFSA0A0A6YYL1 179 aa13.53□□□□□ -0.24
RBFOX1-220ENST00000570188 C11orf95C9JLR9 678 aaPredicted RBP13.53□□□□□ -0.24
RBFOX1-220ENST00000570188 CFAP70Q5T0N1 1121 aa13.53□□□□□ -0.24
RBFOX1-220ENST00000570188 KIF7Q2M1P5 1343 aa13.53□□□□□ -0.24
RBFOX1-220ENST00000570188 EIF3AQ14152 1382 aaKnown RBP13.53□□□□□ -0.24
RBFOX1-220ENST00000570188 NUTM2DQ5VT03 806 aaPredicted RBP13.52□□□□□ -0.25
RBFOX1-220ENST00000570188 RIMS2Q9UQ26 1411 aa13.52□□□□□ -0.25
RBFOX1-220ENST00000570188 IFNL1Q8IU54 200 aa13.51□□□□□ -0.25
RBFOX1-220ENST00000570188 ZNF142P52746 1687 aaPredicted RBP13.5□□□□□ -0.25
RBFOX1-220ENST00000570188 NRXN3Q9Y4C0 1643 aa13.5□□□□□ -0.25
RBFOX1-220ENST00000570188 ASXL1Q8IXJ9 1541 aa13.5□□□□□ -0.25
RBFOX1-220ENST00000570188 CEBPAP49715 358 aaPredicted RBP13.5□□□□□ -0.25
RBFOX1-220ENST00000570188 KCNV2Q8TDN2 545 aa13.5□□□□□ -0.25
RBFOX1-220ENST00000570188 C14orf93Q9H972 538 aaKnown RBP13.5□□□□□ -0.25
RBFOX1-220ENST00000570188 ALKQ9UM73 1620 aa13.5□□□□□ -0.25
RBFOX1-220ENST00000570188 PAK3O75914 559 aaPredicted RBP13.49□□□□□ -0.25
RBFOX1-220ENST00000570188 POLR3GLQ9BT43 218 aa13.48□□□□□ -0.25
RBFOX1-220ENST00000570188 CEP170BQ9Y4F5 1589 aaPredicted RBP13.48□□□□□ -0.25
RBFOX1-220ENST00000570188 MAP3K13O43283 966 aa13.47□□□□□ -0.25
RBFOX1-220ENST00000570188 WDR70Q9NW82 654 aa13.47□□□□□ -0.25
RBFOX1-220ENST00000570188 KIF12Q96FN5 646 aa13.46□□□□□ -0.25
RBFOX1-220ENST00000570188 DISP3Q9P2K9 1392 aa13.45□□□□□ -0.26
RBFOX1-220ENST00000570188 KNDC1Q76NI1 1749 aa13.45□□□□□ -0.26
RBFOX1-220ENST00000570188 MYOM1P52179 1685 aa13.45□□□□□ -0.26
RBFOX1-220ENST00000570188 TESK2Q96S53 571 aa13.45□□□□□ -0.26
RBFOX1-220ENST00000570188 SETD1BQ9UPS6 1966 aaKnown RBP13.45□□□□□ -0.26
RBFOX1-220ENST00000570188 TMEM2Q9UHN6 1383 aa13.45□□□□□ -0.26
RBFOX1-220ENST00000570188 SLIT1O75093 1534 aa13.44□□□□□ -0.26
RBFOX1-220ENST00000570188 TMF1P82094 1093 aa13.44□□□□□ -0.26
RBFOX1-220ENST00000570188 PIP4P2Q8N4L2 257 aa13.44□□□□□ -0.26
RBFOX1-220ENST00000570188 EFCAB3Q8N7B9 438 aa13.44□□□□□ -0.26
RBFOX1-220ENST00000570188 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.44□□□□□ -0.26
RBFOX1-220ENST00000570188 PTPRMP28827 1452 aa13.43□□□□□ -0.26
RBFOX1-220ENST00000570188 PPP1R37O75864 691 aa13.43□□□□□ -0.26
RBFOX1-220ENST00000570188 TMEM132EQ6IEE7 984 aa13.43□□□□□ -0.26
RBFOX1-220ENST00000570188 FBXO22Q8NEZ5 403 aa13.43□□□□□ -0.26
RBFOX1-220ENST00000570188 CABP2Q9NPB3 220 aa13.43□□□□□ -0.26
RBFOX1-220ENST00000570188 ARHGAP23Q9P227 1491 aa13.42□□□□□ -0.26
RBFOX1-220ENST00000570188 ANP32CO43423 234 aa13.42□□□□□ -0.26
RBFOX1-220ENST00000570188 HDGFP51858 240 aaKnown RBP13.42□□□□□ -0.26
RBFOX1-220ENST00000570188 CHRDL2Q6WN34 429 aa13.42□□□□□ -0.26
RBFOX1-220ENST00000570188 CENPJQ9HC77 1338 aaPredicted RBP13.41□□□□□ -0.26
RBFOX1-220ENST00000570188 YTHDC2Q9H6S0 1430 aaKnown RBP13.41□□□□□ -0.26
RBFOX1-220ENST00000570188 TRAK1Q9UPV9 953 aa13.41□□□□□ -0.26
RBFOX1-220ENST00000570188 SBNO2Q9Y2G9 1366 aa13.41□□□□□ -0.26
RBFOX1-220ENST00000570188 PHF8Q9UPP1 1060 aa13.4□□□□□ -0.26
RBFOX1-220ENST00000570188 DLC1Q96QB1 1528 aa13.39□□□□□ -0.27
RBFOX1-220ENST00000570188 NLRP6P59044 892 aa13.39□□□□□ -0.27
RBFOX1-220ENST00000570188 DIP2AQ14689 1571 aa13.38□□□□□ -0.27
RBFOX1-220ENST00000570188 PLEKHG1Q9ULL1 1385 aa13.38□□□□□ -0.27
RBFOX1-220ENST00000570188 CDCA8Q53HL2 280 aa13.38□□□□□ -0.27
RBFOX1-220ENST00000570188 CPS1P31327 1500 aa13.36□□□□□ -0.27
RBFOX1-220ENST00000570188 TULP4Q9NRJ4 1543 aa13.36□□□□□ -0.27
RBFOX1-220ENST00000570188 SOX12O15370 315 aa13.36□□□□□ -0.27
RBFOX1-220ENST00000570188 THEMISQ8N1K5 641 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms