RNA–Protein interactions for RNA: ENST00000569506.1

NEIL1-223, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-223ENST00000569506 NWD1Q149M9 1564 aa22.74■■□□□ 1.23
NEIL1-223ENST00000569506 SIRT1Q96EB6 747 aa22.73■■□□□ 1.23
NEIL1-223ENST00000569506 CENPJQ9HC77 1338 aaPredicted RBP22.73■■□□□ 1.23
NEIL1-223ENST00000569506 TECPR2O15040 1411 aa22.72■■□□□ 1.23
NEIL1-223ENST00000569506 TESK2Q96S53 571 aa22.71■■□□□ 1.23
NEIL1-223ENST00000569506 ARHGEF28Q8N1W1 1705 aaKnown RBP22.71■■□□□ 1.23
NEIL1-223ENST00000569506 PROSER2Q86WR7 435 aaPredicted RBP22.7■■□□□ 1.22
NEIL1-223ENST00000569506 KNDC1Q76NI1 1749 aa22.7■■□□□ 1.22
NEIL1-223ENST00000569506 SBNO2Q9Y2G9 1366 aa22.69■■□□□ 1.22
NEIL1-223ENST00000569506 PHLPP1O60346 1717 aa22.68■■□□□ 1.22
NEIL1-223ENST00000569506 PTPRUQ92729 1446 aa22.68■■□□□ 1.22
NEIL1-223ENST00000569506 TMF1P82094 1093 aa22.68■■□□□ 1.22
NEIL1-223ENST00000569506 POGKQ9P215 609 aa22.68■■□□□ 1.22
NEIL1-223ENST00000569506 AMOTL2Q9Y2J4 779 aa22.68■■□□□ 1.22
NEIL1-223ENST00000569506 PRAM1Q96QH2 718 aa22.67■■□□□ 1.22
NEIL1-223ENST00000569506 MSH6P52701 1360 aa22.66■■□□□ 1.22
NEIL1-223ENST00000569506 JCADQ9P266 1359 aa22.64■■□□□ 1.22
NEIL1-223ENST00000569506 C11orf95C9JLR9 678 aaPredicted RBP22.64■■□□□ 1.21
NEIL1-223ENST00000569506 RBM33Q96EV2 1170 aaKnown RBP22.64■■□□□ 1.21
NEIL1-223ENST00000569506 QRICH2Q9H0J4 1663 aa22.64■■□□□ 1.21
NEIL1-223ENST00000569506 CCDC7Q96M83 1385 aa22.63■■□□□ 1.21
NEIL1-223ENST00000569506 WASHC2AQ641Q2 1341 aa22.63■■□□□ 1.21
NEIL1-223ENST00000569506 CDCA8Q53HL2 280 aa22.63■■□□□ 1.21
NEIL1-223ENST00000569506 PTCH1Q13635 1447 aa22.63■■□□□ 1.21
NEIL1-223ENST00000569506 KIF7Q2M1P5 1343 aa22.62■■□□□ 1.21
NEIL1-223ENST00000569506 CHD2O14647 1828 aaKnown RBP22.62■■□□□ 1.21
NEIL1-223ENST00000569506 XRN1Q8IZH2 1706 aaKnown RBP22.62■■□□□ 1.21
NEIL1-223ENST00000569506 ROBO2Q9HCK4 1378 aa22.62■■□□□ 1.21
NEIL1-223ENST00000569506 WAPLQ7Z5K2 1190 aa22.61■■□□□ 1.21
NEIL1-223ENST00000569506 SLAIN2Q9P270 581 aa22.61■■□□□ 1.21
NEIL1-223ENST00000569506 COL16A1Q07092 1604 aaPredicted RBP22.6■■□□□ 1.21
NEIL1-223ENST00000569506 SAFB2Q14151 953 aaKnown RBP eCLIP22.59■■□□□ 1.21
NEIL1-223ENST00000569506 PLEKHH1Q9ULM0 1364 aa22.59■■□□□ 1.21
NEIL1-223ENST00000569506 EVC2Q86UK5 1308 aa22.57■■□□□ 1.2
NEIL1-223ENST00000569506 PUS7Q96PZ0 661 aaKnown RBP22.56■■□□□ 1.2
NEIL1-223ENST00000569506 MINK1Q8N4C8 1332 aaPredicted RBP22.56■■□□□ 1.2
NEIL1-223ENST00000569506 POLR3GLQ9BT43 218 aa22.54■■□□□ 1.2
NEIL1-223ENST00000569506 NCOA3Q9Y6Q9 1424 aa22.54■■□□□ 1.2
NEIL1-223ENST00000569506 SPATA31A6Q5VVP1 1343 aa22.53■■□□□ 1.2
NEIL1-223ENST00000569506 LRP6O75581 1613 aa22.53■■□□□ 1.2
NEIL1-223ENST00000569506 DDX10Q13206 875 aaKnown RBP22.52■■□□□ 1.2
NEIL1-223ENST00000569506 SHPRHQ149N8 1683 aa22.51■■□□□ 1.19
NEIL1-223ENST00000569506 TULP4Q9NRJ4 1543 aa22.51■■□□□ 1.19
NEIL1-223ENST00000569506 AHDC1Q5TGY3 1603 aaPredicted RBP22.5■■□□□ 1.19
NEIL1-223ENST00000569506 ZNF772Q68DY9 489 aaPredicted RBP22.49■■□□□ 1.19
NEIL1-223ENST00000569506 ADGRB2O60241 1585 aa22.48■■□□□ 1.19
NEIL1-223ENST00000569506 WASLO00401 505 aaPredicted RBP22.48■■□□□ 1.19
NEIL1-223ENST00000569506 DIEXFQ68CQ4 756 aaKnown RBP22.48■■□□□ 1.19
NEIL1-223ENST00000569506 CDK19Q9BWU1 502 aa22.48■■□□□ 1.19
NEIL1-223ENST00000569506 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.48■■□□□ 1.19
NEIL1-223ENST00000569506 SRPK2P78362 688 aaKnown RBP22.47■■□□□ 1.19
NEIL1-223ENST00000569506 UPF1Q92900 1129 aaKnown RBP eCLIP22.47■■□□□ 1.19
NEIL1-223ENST00000569506 MEX3CQ5U5Q3 659 aaKnown RBP22.46■■□□□ 1.19
NEIL1-223ENST00000569506 CABP2Q9NPB3 220 aa22.45■■□□□ 1.18
NEIL1-223ENST00000569506 ATAD2Q6PL18 1390 aa22.45■■□□□ 1.18
NEIL1-223ENST00000569506 CADPS2Q86UW7 1296 aa22.44■■□□□ 1.18
NEIL1-223ENST00000569506 C14orf37Q86TY3 774 aa22.43■■□□□ 1.18
NEIL1-223ENST00000569506 ADGRL3Q9HAR2 1447 aa22.41■■□□□ 1.18
NEIL1-223ENST00000569506 NINLQ9Y2I6 1382 aa22.41■■□□□ 1.18
NEIL1-223ENST00000569506 C19orf44Q9H6X5 657 aa22.41■■□□□ 1.18
NEIL1-223ENST00000569506 CDK12Q9NYV4 1490 aaPredicted RBP22.41■■□□□ 1.18
NEIL1-223ENST00000569506 ATF3P18847 181 aa22.39■■□□□ 1.17
NEIL1-223ENST00000569506 TMC1Q8TDI8 760 aa22.38■■□□□ 1.17
NEIL1-223ENST00000569506 CDC42BPGQ6DT37 1551 aa22.38■■□□□ 1.17
NEIL1-223ENST00000569506 MYOM1P52179 1685 aa22.37■■□□□ 1.17
NEIL1-223ENST00000569506 RXRBP28702 533 aa22.37■■□□□ 1.17
NEIL1-223ENST00000569506 NUDT16Q96DE0 195 aaKnown RBP22.37■■□□□ 1.17
NEIL1-223ENST00000569506 NALCNQ8IZF0 1738 aa22.37■■□□□ 1.17
NEIL1-223ENST00000569506 PANK3Q9H999 370 aa22.36■■□□□ 1.17
NEIL1-223ENST00000569506 DCCP43146 1447 aa22.35■■□□□ 1.17
NEIL1-223ENST00000569506 SLC12A5Q9H2X9 1139 aa22.35■■□□□ 1.17
NEIL1-223ENST00000569506 CCDC61Q9Y6R9 512 aa22.35■■□□□ 1.17
NEIL1-223ENST00000569506 ANKARQ7Z5J8 1434 aa22.34■■□□□ 1.17
NEIL1-223ENST00000569506 BRINP3Q76B58 766 aa22.33■■□□□ 1.17
NEIL1-223ENST00000569506 ATP7BP35670 1465 aa22.33■■□□□ 1.16
NEIL1-223ENST00000569506 PRR36Q9H6K5 1346 aa22.32■■□□□ 1.16
NEIL1-223ENST00000569506 FMN2Q9NZ56 1722 aa22.32■■□□□ 1.16
NEIL1-223ENST00000569506 NHSL1Q5SYE7 1610 aa22.31■■□□□ 1.16
NEIL1-223ENST00000569506 CABP1Q9NZU7 370 aa22.31■■□□□ 1.16
NEIL1-223ENST00000569506 ANKRD36BQ8N2N9 1353 aa22.3■■□□□ 1.16
NEIL1-223ENST00000569506 TERF2IPQ9NYB0 399 aa22.3■■□□□ 1.16
NEIL1-223ENST00000569506 SRCAPQ6ZRS2 3230 aa22.3■■□□□ 1.16
NEIL1-223ENST00000569506 PPIP5K1Q6PFW1 1433 aa22.3■■□□□ 1.16
NEIL1-223ENST00000569506 AFF2P51816 1311 aa22.29■■□□□ 1.16
NEIL1-223ENST00000569506 PLEKHG3A1L390 1219 aa22.28■■□□□ 1.16
NEIL1-223ENST00000569506 NUTM2FA1L443 756 aa22.28■■□□□ 1.16
NEIL1-223ENST00000569506 NUTM2BA6NNL0 878 aaPredicted RBP22.28■■□□□ 1.16
NEIL1-223ENST00000569506 NUTM2EB1AL46 878 aaPredicted RBP22.28■■□□□ 1.16
NEIL1-223ENST00000569506 PER1O15534 1290 aaPredicted RBP22.28■■□□□ 1.16
NEIL1-223ENST00000569506 HDGFL2Q7Z4V5 671 aaPredicted RBP22.28■■□□□ 1.16
NEIL1-223ENST00000569506 NUTM2AQ8IVF1 878 aaPredicted RBP22.28■■□□□ 1.16
NEIL1-223ENST00000569506 KNSTRNQ9Y448 316 aa22.27■■□□□ 1.16
NEIL1-223ENST00000569506 USP32Q8NFA0 1604 aa22.27■■□□□ 1.16
NEIL1-223ENST00000569506 TOPAZ1Q8N9V7 1692 aa22.26■■□□□ 1.15
NEIL1-223ENST00000569506 ANP32CO43423 234 aa22.26■■□□□ 1.15
NEIL1-223ENST00000569506 ITSN1Q15811 1721 aa22.26■■□□□ 1.15
NEIL1-223ENST00000569506 MST1RQ04912 1400 aa22.25■■□□□ 1.15
NEIL1-223ENST00000569506 CD163L1Q9NR16 1453 aa22.24■■□□□ 1.15
NEIL1-223ENST00000569506 ZNF692Q9BU19 519 aaPredicted RBP22.24■■□□□ 1.15
NEIL1-223ENST00000569506 CARD14Q9BXL6 1004 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms