RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 ZBTB22O15209 634 aa7.74□□□□□ -1.17
CDH13-213ENST00000569454 NBPF1Q3BBV0 1214 aa7.74□□□□□ -1.17
CDH13-213ENST00000569454 TMC1Q8TDI8 760 aa7.74□□□□□ -1.17
CDH13-213ENST00000569454 IQSEC2Q5JU85 1478 aa7.74□□□□□ -1.17
CDH13-213ENST00000569454 CEP350Q5VT06 3117 aa7.74□□□□□ -1.17
CDH13-213ENST00000569454 KDM5AP29375 1690 aaKnown RBP7.73□□□□□ -1.17
CDH13-213ENST00000569454 NOS1P29475 1434 aa7.73□□□□□ -1.17
CDH13-213ENST00000569454 SMG6Q86US8 1419 aaKnown RBP7.73□□□□□ -1.17
CDH13-213ENST00000569454 YY1P25490 414 aa7.73□□□□□ -1.17
CDH13-213ENST00000569454 FKBP8Q14318 412 aa7.73□□□□□ -1.17
CDH13-213ENST00000569454 FAM9BQ8IZU0 186 aa7.73□□□□□ -1.17
CDH13-213ENST00000569454 PIK3C2BO00750 1634 aa7.73□□□□□ -1.17
CDH13-213ENST00000569454 DIP2BQ9P265 1576 aa7.72□□□□□ -1.17
CDH13-213ENST00000569454 POTEIP0CG38 1075 aa7.72□□□□□ -1.17
CDH13-213ENST00000569454 PNISRQ8TF01 805 aaKnown RBP7.72□□□□□ -1.17
CDH13-213ENST00000569454 ARXQ96QS3 562 aa7.72□□□□□ -1.17
CDH13-213ENST00000569454 MROH2AA6NES4 1674 aa7.72□□□□□ -1.17
CDH13-213ENST00000569454 PPLO60437 1756 aa7.71□□□□□ -1.17
CDH13-213ENST00000569454 PIK3C2GO75747 1445 aa7.71□□□□□ -1.17
CDH13-213ENST00000569454 PER1O15534 1290 aaPredicted RBP7.71□□□□□ -1.18
CDH13-213ENST00000569454 AGLP35573 1532 aa7.71□□□□□ -1.18
CDH13-213ENST00000569454 UGGT1Q9NYU2 1555 aa7.71□□□□□ -1.18
CDH13-213ENST00000569454 ZFYVE9O95405 1425 aa7.7□□□□□ -1.18
CDH13-213ENST00000569454 ASXL1Q8IXJ9 1541 aa7.7□□□□□ -1.18
CDH13-213ENST00000569454 ATXN8OSP0DMR3 200 aa7.7□□□□□ -1.18
CDH13-213ENST00000569454 CCDC184Q52MB2 194 aa7.7□□□□□ -1.18
CDH13-213ENST00000569454 SSUH2Q9Y2M2 353 aa7.7□□□□□ -1.18
CDH13-213ENST00000569454 PDE3BQ13370 1112 aa7.69□□□□□ -1.18
CDH13-213ENST00000569454 POTEAQ6S8J7 498 aa7.69□□□□□ -1.18
CDH13-213ENST00000569454 SLC52A1Q9NWF4 448 aa7.69□□□□□ -1.18
CDH13-213ENST00000569454 NUDCQ9Y266 331 aa7.69□□□□□ -1.18
CDH13-213ENST00000569454 KNSTRNQ9Y448 316 aa7.69□□□□□ -1.18
CDH13-213ENST00000569454 MYOM1P52179 1685 aa7.69□□□□□ -1.18
CDH13-213ENST00000569454 SETD1AO15047 1707 aaKnown RBP7.69□□□□□ -1.18
CDH13-213ENST00000569454 BLMP54132 1417 aaPredicted RBP7.69□□□□□ -1.18
CDH13-213ENST00000569454 PUS7Q96PZ0 661 aaKnown RBP7.68□□□□□ -1.18
CDH13-213ENST00000569454 NEXMIFQ5QGS0 1516 aa7.68□□□□□ -1.18
CDH13-213ENST00000569454 ADGRB1O14514 1584 aa7.67□□□□□ -1.18
CDH13-213ENST00000569454 TSPOAP1O95153 1857 aa7.67□□□□□ -1.18
CDH13-213ENST00000569454 VGFO15240 615 aaPredicted RBP7.67□□□□□ -1.18
CDH13-213ENST00000569454 GGT6Q6P531 493 aa7.67□□□□□ -1.18
CDH13-213ENST00000569454 PANK3Q9H999 370 aa7.67□□□□□ -1.18
CDH13-213ENST00000569454 ERVK-7P63135 1459 aa7.67□□□□□ -1.18
CDH13-213ENST00000569454 PREX1Q8TCU6 1659 aa7.67□□□□□ -1.18
CDH13-213ENST00000569454 RAPGEF3O95398 923 aa7.66□□□□□ -1.18
CDH13-213ENST00000569454 ZNF692Q9BU19 519 aaPredicted RBP7.66□□□□□ -1.18
CDH13-213ENST00000569454 C14orf93Q9H972 538 aaKnown RBP7.66□□□□□ -1.18
CDH13-213ENST00000569454 ADGRF5Q8IZF2 1346 aa7.66□□□□□ -1.18
CDH13-213ENST00000569454 CENPJQ9HC77 1338 aaPredicted RBP7.66□□□□□ -1.18
CDH13-213ENST00000569454 NINLQ9Y2I6 1382 aa7.66□□□□□ -1.18
CDH13-213ENST00000569454 YEATS2Q9ULM3 1422 aa7.66□□□□□ -1.18
CDH13-213ENST00000569454 ARHGEF40Q8TER5 1519 aa7.66□□□□□ -1.18
CDH13-213ENST00000569454 USP32Q8NFA0 1604 aa7.66□□□□□ -1.18
CDH13-213ENST00000569454 PRR29P0C7W0 189 aa7.65□□□□□ -1.18
CDH13-213ENST00000569454 RNF123Q5XPI4 1314 aa7.65□□□□□ -1.18
CDH13-213ENST00000569454 CHADLQ6NUI6 762 aa7.65□□□□□ -1.18
CDH13-213ENST00000569454 NGEFQ8N5V2 710 aa7.65□□□□□ -1.18
CDH13-213ENST00000569454 SIGLEC1Q9BZZ2 1709 aa7.65□□□□□ -1.18
CDH13-213ENST00000569454 QRICH2Q9H0J4 1663 aa7.65□□□□□ -1.18
CDH13-213ENST00000569454 PPP4R2Q9NY27 417 aa7.65□□□□□ -1.18
CDH13-213ENST00000569454 CFAP70Q5T0N1 1121 aa7.64□□□□□ -1.19
CDH13-213ENST00000569454 NSD2O96028 1365 aa7.63□□□□□ -1.19
CDH13-213ENST00000569454 CD44P16070 742 aaKnown RBP7.63□□□□□ -1.19
CDH13-213ENST00000569454 TMEM131LA2VDJ0 1609 aa7.63□□□□□ -1.19
CDH13-213ENST00000569454 ARHGEF28Q8N1W1 1705 aaKnown RBP7.62□□□□□ -1.19
CDH13-213ENST00000569454 CHGAP10645 457 aaKnown RBP7.62□□□□□ -1.19
CDH13-213ENST00000569454 WDR43Q15061 677 aaKnown RBP eCLIP7.62□□□□□ -1.19
CDH13-213ENST00000569454 CC2D1BQ5T0F9 858 aaKnown RBP7.62□□□□□ -1.19
CDH13-213ENST00000569454 BCANQ96GW7 911 aa7.62□□□□□ -1.19
CDH13-213ENST00000569454 DCBLD2Q96PD2 775 aa7.62□□□□□ -1.19
CDH13-213ENST00000569454 EVC2Q86UK5 1308 aa7.61□□□□□ -1.19
CDH13-213ENST00000569454 PPP2R1AP30153 589 aa7.61□□□□□ -1.19
CDH13-213ENST00000569454 CNGB1Q14028 1251 aaPredicted RBP7.6□□□□□ -1.19
CDH13-213ENST00000569454 TSHZ2Q9NRE2 1034 aa7.6□□□□□ -1.19
CDH13-213ENST00000569454 CLTCQ00610 1675 aaKnown RBP7.6□□□□□ -1.19
CDH13-213ENST00000569454 POLR3AO14802 1390 aaPredicted RBP7.59□□□□□ -1.19
CDH13-213ENST00000569454 ATAD2Q6PL18 1390 aa7.59□□□□□ -1.19
CDH13-213ENST00000569454 ANKRD36BQ8N2N9 1353 aa7.59□□□□□ -1.19
CDH13-213ENST00000569454 DLC1Q96QB1 1528 aa7.59□□□□□ -1.19
CDH13-213ENST00000569454 TULP4Q9NRJ4 1543 aa7.58□□□□□ -1.2
CDH13-213ENST00000569454 CGNL1Q0VF96 1302 aa7.58□□□□□ -1.2
CDH13-213ENST00000569454 IDI1Q13907 227 aa7.58□□□□□ -1.2
CDH13-213ENST00000569454 ZRANB1Q9UGI0 708 aa7.58□□□□□ -1.2
CDH13-213ENST00000569454 FARP1Q9Y4F1 1045 aaPredicted RBP7.58□□□□□ -1.2
CDH13-213ENST00000569454 NSD3Q9BZ95 1437 aa7.58□□□□□ -1.2
CDH13-213ENST00000569454 MED14O60244 1454 aa7.57□□□□□ -1.2
CDH13-213ENST00000569454 RCAN3Q9UKA8 241 aa7.57□□□□□ -1.2
CDH13-213ENST00000569454 TRAK1Q9UPV9 953 aa7.57□□□□□ -1.2
CDH13-213ENST00000569454 YTHDC2Q9H6S0 1430 aaKnown RBP7.56□□□□□ -1.2
CDH13-213ENST00000569454 POTEMA6NI47 508 aa7.56□□□□□ -1.2
CDH13-213ENST00000569454 RRP1P56182 461 aaKnown RBP7.56□□□□□ -1.2
CDH13-213ENST00000569454 C1QTNF8P60827 252 aa7.56□□□□□ -1.2
CDH13-213ENST00000569454 MKRN4PQ13434 485 aaPredicted RBP7.56□□□□□ -1.2
CDH13-213ENST00000569454 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.56□□□□□ -1.2
CDH13-213ENST00000569454 ALKQ9UM73 1620 aa7.56□□□□□ -1.2
CDH13-213ENST00000569454 A2ML1A8K2U0 1454 aa7.55□□□□□ -1.2
CDH13-213ENST00000569454 CFAP65Q6ZU64 1925 aaKnown RBP7.55□□□□□ -1.2
CDH13-213ENST00000569454 HDGFP51858 240 aaKnown RBP7.55□□□□□ -1.2
CDH13-213ENST00000569454 PRELPP51888 382 aa7.55□□□□□ -1.2
CDH13-213ENST00000569454 PIP4K2BP78356 416 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms