RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 ANKRD36BQ8N2N9 1353 aa20.9■□□□□ 0.94
SNX20-204ENST00000568993 SENP3Q9H4L4 574 aaPredicted RBP20.9■□□□□ 0.94
SNX20-204ENST00000568993 NSD3Q9BZ95 1437 aa20.89■□□□□ 0.94
SNX20-204ENST00000568993 CEBPAP49715 358 aaPredicted RBP20.89■□□□□ 0.93
SNX20-204ENST00000568993 SAFB2Q14151 953 aaKnown RBP eCLIP20.88■□□□□ 0.93
SNX20-204ENST00000568993 SIRT1Q96EB6 747 aa20.88■□□□□ 0.93
SNX20-204ENST00000568993 ATAD2Q6PL18 1390 aa20.88■□□□□ 0.93
SNX20-204ENST00000568993 CABP2Q9NPB3 220 aa20.88■□□□□ 0.93
SNX20-204ENST00000568993 KNDC1Q76NI1 1749 aa20.88■□□□□ 0.93
SNX20-204ENST00000568993 TECPR2O15040 1411 aa20.87■□□□□ 0.93
SNX20-204ENST00000568993 METP08581 1390 aa20.87■□□□□ 0.93
SNX20-204ENST00000568993 BLMP54132 1417 aaPredicted RBP20.87■□□□□ 0.93
SNX20-204ENST00000568993 SMG6Q86US8 1419 aaKnown RBP20.86■□□□□ 0.93
SNX20-204ENST00000568993 MINK1Q8N4C8 1332 aaPredicted RBP20.86■□□□□ 0.93
SNX20-204ENST00000568993 SLIT1O75093 1534 aa20.86■□□□□ 0.93
SNX20-204ENST00000568993 PLEKHG1Q9ULL1 1385 aa20.85■□□□□ 0.93
SNX20-204ENST00000568993 ARHGAP23Q9P227 1491 aa20.85■□□□□ 0.93
SNX20-204ENST00000568993 NEFLP07196 543 aa20.85■□□□□ 0.93
SNX20-204ENST00000568993 FAM135BQ49AJ0 1406 aa20.84■□□□□ 0.93
SNX20-204ENST00000568993 SRPK2P78362 688 aaKnown RBP20.84■□□□□ 0.93
SNX20-204ENST00000568993 ADAMTS13Q76LX8 1427 aa20.84■□□□□ 0.93
SNX20-204ENST00000568993 NSD2O96028 1365 aa20.83■□□□□ 0.93
SNX20-204ENST00000568993 CGNL1Q0VF96 1302 aa20.82■□□□□ 0.92
SNX20-204ENST00000568993 FKBP8Q14318 412 aa20.82■□□□□ 0.92
SNX20-204ENST00000568993 CPS1P31327 1500 aa20.82■□□□□ 0.92
SNX20-204ENST00000568993 LTKP29376 864 aa20.82■□□□□ 0.92
SNX20-204ENST00000568993 CDK19Q9BWU1 502 aa20.82■□□□□ 0.92
SNX20-204ENST00000568993 MED14O60244 1454 aa20.81■□□□□ 0.92
SNX20-204ENST00000568993 WAPLQ7Z5K2 1190 aa20.81■□□□□ 0.92
SNX20-204ENST00000568993 PLEKHH1Q9ULM0 1364 aa20.81■□□□□ 0.92
SNX20-204ENST00000568993 NUDCQ9Y266 331 aa20.8■□□□□ 0.92
SNX20-204ENST00000568993 CD163L1Q9NR16 1453 aa20.79■□□□□ 0.92
SNX20-204ENST00000568993 A0A1W2PP64 1363 aa20.79■□□□□ 0.92
SNX20-204ENST00000568993 EID1Q9Y6B2 187 aa20.79■□□□□ 0.92
SNX20-204ENST00000568993 POLR3AO14802 1390 aaPredicted RBP20.78■□□□□ 0.92
SNX20-204ENST00000568993 MORC1Q86VD1 984 aa20.78■□□□□ 0.92
SNX20-204ENST00000568993 TXNDC2Q86VQ3 553 aa20.78■□□□□ 0.92
SNX20-204ENST00000568993 ADAMTS8Q9UP79 889 aa20.78■□□□□ 0.92
SNX20-204ENST00000568993 THEMISQ8N1K5 641 aaPredicted RBP20.78■□□□□ 0.92
SNX20-204ENST00000568993 TERF2IPQ9NYB0 399 aa20.78■□□□□ 0.92
SNX20-204ENST00000568993 PDE3BQ13370 1112 aa20.77■□□□□ 0.92
SNX20-204ENST00000568993 ERICH6Q7L0X2 663 aa20.77■□□□□ 0.92
SNX20-204ENST00000568993 WDR43Q15061 677 aaKnown RBP eCLIP20.77■□□□□ 0.91
SNX20-204ENST00000568993 BCANQ96GW7 911 aa20.75■□□□□ 0.91
SNX20-204ENST00000568993 ADAMTSL3P82987 1691 aa20.75■□□□□ 0.91
SNX20-204ENST00000568993 RIMS1Q86UR5 1692 aaKnown RBP20.74■□□□□ 0.91
SNX20-204ENST00000568993 WASLO00401 505 aaPredicted RBP20.73■□□□□ 0.91
SNX20-204ENST00000568993 ATP7BP35670 1465 aa20.73■□□□□ 0.91
SNX20-204ENST00000568993 TBX22Q9Y458 520 aa20.73■□□□□ 0.91
SNX20-204ENST00000568993 ERICH6BQ5W0A0 696 aa20.72■□□□□ 0.91
SNX20-204ENST00000568993 HDGFL2Q7Z4V5 671 aaPredicted RBP20.71■□□□□ 0.91
SNX20-204ENST00000568993 CABP1Q9NZU7 370 aa20.71■□□□□ 0.91
SNX20-204ENST00000568993 DIP2AQ14689 1571 aa20.71■□□□□ 0.91
SNX20-204ENST00000568993 ANKRD26Q9UPS8 1709 aa20.71■□□□□ 0.91
SNX20-204ENST00000568993 CEP170BQ9Y4F5 1589 aaPredicted RBP20.71■□□□□ 0.91
SNX20-204ENST00000568993 ROBO2Q9HCK4 1378 aa20.7■□□□□ 0.9
SNX20-204ENST00000568993 ADGRB2O60241 1585 aa20.69■□□□□ 0.9
SNX20-204ENST00000568993 RNF123Q5XPI4 1314 aa20.69■□□□□ 0.9
SNX20-204ENST00000568993 BCL11AQ9H165 835 aa20.69■□□□□ 0.9
SNX20-204ENST00000568993 SENP3-EIF4A1A0A087X0R7 540 aa20.68■□□□□ 0.9
SNX20-204ENST00000568993 PTPRUQ92729 1446 aa20.68■□□□□ 0.9
SNX20-204ENST00000568993 PLPPR3Q6T4P5 718 aa20.68■□□□□ 0.9
SNX20-204ENST00000568993 FYB1O15117 783 aa20.67■□□□□ 0.9
SNX20-204ENST00000568993 SHPRHQ149N8 1683 aa20.67■□□□□ 0.9
SNX20-204ENST00000568993 SETD1BQ9UPS6 1966 aaKnown RBP20.66■□□□□ 0.9
SNX20-204ENST00000568993 CPSF1Q10570 1443 aaKnown RBP20.66■□□□□ 0.9
SNX20-204ENST00000568993 ZNF142P52746 1687 aaPredicted RBP20.66■□□□□ 0.9
SNX20-204ENST00000568993 SLC26A8Q96RN1 970 aa20.66■□□□□ 0.9
SNX20-204ENST00000568993 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.65■□□□□ 0.9
SNX20-204ENST00000568993 KIF20BQ96Q89 1820 aa20.65■□□□□ 0.9
SNX20-204ENST00000568993 PTCH1Q13635 1447 aa20.64■□□□□ 0.89
SNX20-204ENST00000568993 MTHFSP49914 203 aa20.64■□□□□ 0.89
SNX20-204ENST00000568993 NGEFQ8N5V2 710 aa20.64■□□□□ 0.89
SNX20-204ENST00000568993 NUDT16Q96DE0 195 aaKnown RBP20.64■□□□□ 0.89
SNX20-204ENST00000568993 CCDC61Q9Y6R9 512 aa20.64■□□□□ 0.89
SNX20-204ENST00000568993 PPIP5K1Q6PFW1 1433 aa20.64■□□□□ 0.89
SNX20-204ENST00000568993 TNNT2P45379 298 aaPredicted RBP20.63■□□□□ 0.89
SNX20-204ENST00000568993 SALL2Q9Y467 1007 aaPredicted RBP20.63■□□□□ 0.89
SNX20-204ENST00000568993 ZNF521Q96K83 1311 aa20.63■□□□□ 0.89
SNX20-204ENST00000568993 CFAP53Q96M91 514 aa20.63■□□□□ 0.89
SNX20-204ENST00000568993 CDC42BPGQ6DT37 1551 aa20.62■□□□□ 0.89
SNX20-204ENST00000568993 GGNBP2Q9H3C7 697 aa20.62■□□□□ 0.89
SNX20-204ENST00000568993 PIK3R4Q99570 1358 aa20.62■□□□□ 0.89
SNX20-204ENST00000568993 AMOTL2Q9Y2J4 779 aa20.61■□□□□ 0.89
SNX20-204ENST00000568993 EDC4Q6P2E9 1401 aaKnown RBP20.61■□□□□ 0.89
SNX20-204ENST00000568993 XRN1Q8IZH2 1706 aaKnown RBP20.6■□□□□ 0.89
SNX20-204ENST00000568993 MON2Q7Z3U7 1717 aa20.59■□□□□ 0.89
SNX20-204ENST00000568993 CDCA7LQ96GN5 454 aa20.59■□□□□ 0.89
SNX20-204ENST00000568993 AKAP12Q02952 1782 aa20.59■□□□□ 0.89
SNX20-204ENST00000568993 PRR36Q9H6K5 1346 aa20.58■□□□□ 0.89
SNX20-204ENST00000568993 TOPAZ1Q8N9V7 1692 aa20.58■□□□□ 0.88
SNX20-204ENST00000568993 IRX6P78412 446 aaPredicted RBP20.57■□□□□ 0.88
SNX20-204ENST00000568993 ZNF692Q9BU19 519 aaPredicted RBP20.57■□□□□ 0.88
SNX20-204ENST00000568993 CCDC146Q8IYE0 955 aa20.56■□□□□ 0.88
SNX20-204ENST00000568993 ANKLE2Q86XL3 938 aa20.56■□□□□ 0.88
SNX20-204ENST00000568993 ITSN1Q15811 1721 aa20.56■□□□□ 0.88
SNX20-204ENST00000568993 APAF1O14727 1248 aa20.55■□□□□ 0.88
SNX20-204ENST00000568993 COL3A1P02461 1466 aaPredicted RBP20.55■□□□□ 0.88
SNX20-204ENST00000568993 PNPLA6Q8IY17 1366 aa20.54■□□□□ 0.88
SNX20-204ENST00000568993 PLEKHG3A1L390 1219 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms