RNA–Protein interactions for RNA: ENST00000568936.1

CCNDBP1-214, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,088 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-214ENST00000568936 EVC2Q86UK5 1308 aa15.92■□□□□ 0.14
CCNDBP1-214ENST00000568936 SLC12A5Q9H2X9 1139 aa15.91■□□□□ 0.14
CCNDBP1-214ENST00000568936 GTF3C3Q9Y5Q9 886 aa15.91■□□□□ 0.14
CCNDBP1-214ENST00000568936 ROBO2Q9HCK4 1378 aa15.91■□□□□ 0.14
CCNDBP1-214ENST00000568936 CARD14Q9BXL6 1004 aa15.9■□□□□ 0.14
CCNDBP1-214ENST00000568936 TBX22Q9Y458 520 aa15.9■□□□□ 0.14
CCNDBP1-214ENST00000568936 PARD3Q8TEW0 1356 aa15.89■□□□□ 0.13
CCNDBP1-214ENST00000568936 KDM4FA0A1W2PPD8 638 aa15.89■□□□□ 0.13
CCNDBP1-214ENST00000568936 CC2D1BQ5T0F9 858 aaKnown RBP15.88■□□□□ 0.13
CCNDBP1-214ENST00000568936 FAM135BQ49AJ0 1406 aa15.88■□□□□ 0.13
CCNDBP1-214ENST00000568936 DIP2AQ14689 1571 aa15.88■□□□□ 0.13
CCNDBP1-214ENST00000568936 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.88■□□□□ 0.13
CCNDBP1-214ENST00000568936 AMER1Q5JTC6 1135 aaPredicted RBP15.88■□□□□ 0.13
CCNDBP1-214ENST00000568936 TMC1Q8TDI8 760 aa15.87■□□□□ 0.13
CCNDBP1-214ENST00000568936 SIRT1Q96EB6 747 aa15.87■□□□□ 0.13
CCNDBP1-214ENST00000568936 PUS7Q96PZ0 661 aaKnown RBP15.87■□□□□ 0.13
CCNDBP1-214ENST00000568936 ANKLE2Q86XL3 938 aa15.87■□□□□ 0.13
CCNDBP1-214ENST00000568936 CDK19Q9BWU1 502 aa15.87■□□□□ 0.13
CCNDBP1-214ENST00000568936 XRN1Q8IZH2 1706 aaKnown RBP15.86■□□□□ 0.13
CCNDBP1-214ENST00000568936 KTN1Q86UP2 1357 aaKnown RBP15.86■□□□□ 0.13
CCNDBP1-214ENST00000568936 SRPK2P78362 688 aaKnown RBP15.86■□□□□ 0.13
CCNDBP1-214ENST00000568936 AMOTL2Q9Y2J4 779 aa15.85■□□□□ 0.13
CCNDBP1-214ENST00000568936 RALBP1Q15311 655 aa15.85■□□□□ 0.13
CCNDBP1-214ENST00000568936 MRS2Q9HD23 443 aa15.85■□□□□ 0.13
CCNDBP1-214ENST00000568936 KNSTRNQ9Y448 316 aa15.85■□□□□ 0.13
CCNDBP1-214ENST00000568936 CHD2O14647 1828 aaKnown RBP15.83■□□□□ 0.12
CCNDBP1-214ENST00000568936 MYBBP1AQ9BQG0 1328 aaKnown RBP15.83■□□□□ 0.12
CCNDBP1-214ENST00000568936 CD163L1Q9NR16 1453 aa15.83■□□□□ 0.12
CCNDBP1-214ENST00000568936 NCKAP5LQ9HCH0 1330 aa15.82■□□□□ 0.12
CCNDBP1-214ENST00000568936 NSD3Q9BZ95 1437 aa15.82■□□□□ 0.12
CCNDBP1-214ENST00000568936 WASLO00401 505 aaPredicted RBP15.81■□□□□ 0.12
CCNDBP1-214ENST00000568936 ATAD2Q6PL18 1390 aa15.81■□□□□ 0.12
CCNDBP1-214ENST00000568936 ADGRB2O60241 1585 aa15.8■□□□□ 0.12
CCNDBP1-214ENST00000568936 NPHP4O75161 1426 aaPredicted RBP15.8■□□□□ 0.12
CCNDBP1-214ENST00000568936 PTCH1Q13635 1447 aa15.8■□□□□ 0.12
CCNDBP1-214ENST00000568936 A0A1W2PP64 1363 aa15.8■□□□□ 0.12
CCNDBP1-214ENST00000568936 ANKRD36BQ8N2N9 1353 aa15.8■□□□□ 0.12
CCNDBP1-214ENST00000568936 NPC1L1Q9UHC9 1359 aa15.8■□□□□ 0.12
CCNDBP1-214ENST00000568936 KCNA6P17658 529 aa15.8■□□□□ 0.12
CCNDBP1-214ENST00000568936 FAM9BQ8IZU0 186 aa15.79■□□□□ 0.12
CCNDBP1-214ENST00000568936 CABP1Q9NZU7 370 aa15.79■□□□□ 0.12
CCNDBP1-214ENST00000568936 USP32Q8NFA0 1604 aa15.78■□□□□ 0.12
CCNDBP1-214ENST00000568936 PIK3R4Q99570 1358 aa15.78■□□□□ 0.12
CCNDBP1-214ENST00000568936 PRR36Q9H6K5 1346 aa15.78■□□□□ 0.12
CCNDBP1-214ENST00000568936 BRD4O60885 1362 aaPredicted RBP15.77■□□□□ 0.12
CCNDBP1-214ENST00000568936 NINLQ9Y2I6 1382 aa15.77■□□□□ 0.11
CCNDBP1-214ENST00000568936 ATP7BP35670 1465 aa15.76■□□□□ 0.11
CCNDBP1-214ENST00000568936 HSPA2P54652 639 aa15.76■□□□□ 0.11
CCNDBP1-214ENST00000568936 NLRP13Q86W25 1043 aa15.76■□□□□ 0.11
CCNDBP1-214ENST00000568936 PNISRQ8TF01 805 aaKnown RBP15.76■□□□□ 0.11
CCNDBP1-214ENST00000568936 PPP2R1AP30153 589 aa15.75■□□□□ 0.11
CCNDBP1-214ENST00000568936 NUDT16Q96DE0 195 aaKnown RBP15.75■□□□□ 0.11
CCNDBP1-214ENST00000568936 RGPD8O14715 1765 aaPredicted RBP15.75■□□□□ 0.11
CCNDBP1-214ENST00000568936 TOPAZ1Q8N9V7 1692 aa15.74■□□□□ 0.11
CCNDBP1-214ENST00000568936 PPIP5K1Q6PFW1 1433 aa15.74■□□□□ 0.11
CCNDBP1-214ENST00000568936 NALCNQ8IZF0 1738 aa15.73■□□□□ 0.11
CCNDBP1-214ENST00000568936 RBM33Q96EV2 1170 aaKnown RBP15.73■□□□□ 0.11
CCNDBP1-214ENST00000568936 LMTK3Q96Q04 1460 aa15.73■□□□□ 0.11
CCNDBP1-214ENST00000568936 NUTM2FA1L443 756 aa15.72■□□□□ 0.11
CCNDBP1-214ENST00000568936 AKAP12Q02952 1782 aa15.72■□□□□ 0.11
CCNDBP1-214ENST00000568936 CPSF1Q10570 1443 aaKnown RBP15.71■□□□□ 0.11
CCNDBP1-214ENST00000568936 TERF2IPQ9NYB0 399 aa15.71■□□□□ 0.11
CCNDBP1-214ENST00000568936 CDC42BPGQ6DT37 1551 aa15.71■□□□□ 0.11
CCNDBP1-214ENST00000568936 CCDC61Q9Y6R9 512 aa15.71■□□□□ 0.1
CCNDBP1-214ENST00000568936 MON2Q7Z3U7 1717 aa15.7■□□□□ 0.1
CCNDBP1-214ENST00000568936 STRCP1A6NGW2 1772 aa15.7■□□□□ 0.1
CCNDBP1-214ENST00000568936 STRCQ7RTU9 1775 aa15.7■□□□□ 0.1
CCNDBP1-214ENST00000568936 HNRNPUQ00839 825 aaKnown RBP eCLIP15.7■□□□□ 0.1
CCNDBP1-214ENST00000568936 NWD1Q149M9 1564 aa15.7■□□□□ 0.1
CCNDBP1-214ENST00000568936 CGNL1Q0VF96 1302 aa15.7■□□□□ 0.1
CCNDBP1-214ENST00000568936 ITSN1Q15811 1721 aa15.7■□□□□ 0.1
CCNDBP1-214ENST00000568936 ANKRD26Q9UPS8 1709 aa15.7■□□□□ 0.1
CCNDBP1-214ENST00000568936 NKTRP30414 1462 aaKnown RBP15.7■□□□□ 0.1
CCNDBP1-214ENST00000568936 KIF20BQ96Q89 1820 aa15.69■□□□□ 0.1
CCNDBP1-214ENST00000568936 FMN2Q9NZ56 1722 aa15.69■□□□□ 0.1
CCNDBP1-214ENST00000568936 FYB1O15117 783 aa15.68■□□□□ 0.1
CCNDBP1-214ENST00000568936 HDGFL2Q7Z4V5 671 aaPredicted RBP15.68■□□□□ 0.1
CCNDBP1-214ENST00000568936 GGNBP2Q9H3C7 697 aa15.67■□□□□ 0.1
CCNDBP1-214ENST00000568936 TNNT2P45379 298 aaPredicted RBP15.67■□□□□ 0.1
CCNDBP1-214ENST00000568936 MORC1Q86VD1 984 aa15.67■□□□□ 0.1
CCNDBP1-214ENST00000568936 SENP3-EIF4A1A0A087X0R7 540 aa15.66■□□□□ 0.1
CCNDBP1-214ENST00000568936 NSD2O96028 1365 aa15.65■□□□□ 0.1
CCNDBP1-214ENST00000568936 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.65■□□□□ 0.1
CCNDBP1-214ENST00000568936 NRKQ7Z2Y5 1582 aa15.65■□□□□ 0.1
CCNDBP1-214ENST00000568936 PLEKHG3A1L390 1219 aa15.64■□□□□ 0.09
CCNDBP1-214ENST00000568936 ACEP12821 1306 aa15.64■□□□□ 0.09
CCNDBP1-214ENST00000568936 EDC4Q6P2E9 1401 aaKnown RBP15.64■□□□□ 0.09
CCNDBP1-214ENST00000568936 ZRANB1Q9UGI0 708 aa15.63■□□□□ 0.09
CCNDBP1-214ENST00000568936 ADGRL3Q9HAR2 1447 aa15.62■□□□□ 0.09
CCNDBP1-214ENST00000568936 PMFBP1Q8TBY8 1022 aa15.62■□□□□ 0.09
CCNDBP1-214ENST00000568936 SHPRHQ149N8 1683 aa15.62■□□□□ 0.09
CCNDBP1-214ENST00000568936 NME9Q86XW9 330 aa15.61■□□□□ 0.09
CCNDBP1-214ENST00000568936 FBLN1P23142 703 aa15.6■□□□□ 0.09
CCNDBP1-214ENST00000568936 ADAMTS8Q9UP79 889 aa15.6■□□□□ 0.09
CCNDBP1-214ENST00000568936 ANKARQ7Z5J8 1434 aa15.6■□□□□ 0.09
CCNDBP1-214ENST00000568936 MTHFSP49914 203 aa15.59■□□□□ 0.09
CCNDBP1-214ENST00000568936 USP6P35125 1406 aa15.59■□□□□ 0.09
CCNDBP1-214ENST00000568936 SSH2Q76I76 1423 aa15.59■□□□□ 0.09
CCNDBP1-214ENST00000568936 POLR3AO14802 1390 aaPredicted RBP15.59■□□□□ 0.09
CCNDBP1-214ENST00000568936 PROSER2Q86WR7 435 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms