RNA–Protein interactions for RNA: ENST00000568339.5

COX4I1-215, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 2

Gene COX4I1, Length 2,271 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-215ENST00000568339 HDGFP51858 240 aaKnown RBP22.47■■□□□ 1.19
COX4I1-215ENST00000568339 KNDC1Q76NI1 1749 aa22.45■■□□□ 1.18
COX4I1-215ENST00000568339 TMEM2Q9UHN6 1383 aa22.45■■□□□ 1.18
COX4I1-215ENST00000568339 BLMP54132 1417 aaPredicted RBP22.45■■□□□ 1.18
COX4I1-215ENST00000568339 ABCC11Q96J66 1382 aa22.44■■□□□ 1.18
COX4I1-215ENST00000568339 SMG6Q86US8 1419 aaKnown RBP22.43■■□□□ 1.18
COX4I1-215ENST00000568339 STK26Q9P289 416 aa22.43■■□□□ 1.18
COX4I1-215ENST00000568339 ANKRD36BQ8N2N9 1353 aa22.42■■□□□ 1.18
COX4I1-215ENST00000568339 SLC12A5Q9H2X9 1139 aa22.42■■□□□ 1.18
COX4I1-215ENST00000568339 NSD3Q9BZ95 1437 aa22.41■■□□□ 1.18
COX4I1-215ENST00000568339 PRAM1Q96QH2 718 aa22.41■■□□□ 1.18
COX4I1-215ENST00000568339 ATAD2Q6PL18 1390 aa22.4■■□□□ 1.18
COX4I1-215ENST00000568339 TECPR2O15040 1411 aa22.39■■□□□ 1.17
COX4I1-215ENST00000568339 POGKQ9P215 609 aa22.38■■□□□ 1.17
COX4I1-215ENST00000568339 SIRT1Q96EB6 747 aa22.37■■□□□ 1.17
COX4I1-215ENST00000568339 SLIT1O75093 1534 aa22.37■■□□□ 1.17
COX4I1-215ENST00000568339 NSD2O96028 1365 aa22.37■■□□□ 1.17
COX4I1-215ENST00000568339 CPS1P31327 1500 aa22.36■■□□□ 1.17
COX4I1-215ENST00000568339 CABP2Q9NPB3 220 aa22.36■■□□□ 1.17
COX4I1-215ENST00000568339 ARHGAP23Q9P227 1491 aa22.36■■□□□ 1.17
COX4I1-215ENST00000568339 FAM135BQ49AJ0 1406 aa22.35■■□□□ 1.17
COX4I1-215ENST00000568339 METP08581 1390 aa22.35■■□□□ 1.17
COX4I1-215ENST00000568339 PLEKHG1Q9ULL1 1385 aa22.35■■□□□ 1.17
COX4I1-215ENST00000568339 NUDCQ9Y266 331 aa22.34■■□□□ 1.17
COX4I1-215ENST00000568339 SAFB2Q14151 953 aaKnown RBP eCLIP22.34■■□□□ 1.17
COX4I1-215ENST00000568339 MINK1Q8N4C8 1332 aaPredicted RBP22.33■■□□□ 1.17
COX4I1-215ENST00000568339 ADAMTS13Q76LX8 1427 aa22.33■■□□□ 1.17
COX4I1-215ENST00000568339 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.16
COX4I1-215ENST00000568339 CGNL1Q0VF96 1302 aa22.33■■□□□ 1.16
COX4I1-215ENST00000568339 CEBPAP49715 358 aaPredicted RBP22.32■■□□□ 1.16
COX4I1-215ENST00000568339 SRPK2P78362 688 aaKnown RBP22.32■■□□□ 1.16
COX4I1-215ENST00000568339 MED14O60244 1454 aa22.31■■□□□ 1.16
COX4I1-215ENST00000568339 DNAJC5Q9H3Z4 198 aa22.31■■□□□ 1.16
COX4I1-215ENST00000568339 POLR3AO14802 1390 aaPredicted RBP22.31■■□□□ 1.16
COX4I1-215ENST00000568339 CD163L1Q9NR16 1453 aa22.31■■□□□ 1.16
COX4I1-215ENST00000568339 PDE3BQ13370 1112 aa22.31■■□□□ 1.16
COX4I1-215ENST00000568339 A0A1W2PP64 1363 aa22.3■■□□□ 1.16
COX4I1-215ENST00000568339 ANKRD26Q9UPS8 1709 aa22.3■■□□□ 1.16
COX4I1-215ENST00000568339 PLEKHH1Q9ULM0 1364 aa22.29■■□□□ 1.16
COX4I1-215ENST00000568339 CDK19Q9BWU1 502 aa22.29■■□□□ 1.16
COX4I1-215ENST00000568339 ERICH6BQ5W0A0 696 aa22.28■■□□□ 1.16
COX4I1-215ENST00000568339 ADAMTS8Q9UP79 889 aa22.28■■□□□ 1.16
COX4I1-215ENST00000568339 ERICH6Q7L0X2 663 aa22.28■■□□□ 1.16
COX4I1-215ENST00000568339 WDR43Q15061 677 aaKnown RBP eCLIP22.27■■□□□ 1.16
COX4I1-215ENST00000568339 MORC1Q86VD1 984 aa22.27■■□□□ 1.16
COX4I1-215ENST00000568339 LTKP29376 864 aa22.26■■□□□ 1.15
COX4I1-215ENST00000568339 IRX6P78412 446 aaPredicted RBP22.26■■□□□ 1.15
COX4I1-215ENST00000568339 TERF2IPQ9NYB0 399 aa22.26■■□□□ 1.15
COX4I1-215ENST00000568339 ATP7BP35670 1465 aa22.26■■□□□ 1.15
COX4I1-215ENST00000568339 WAPLQ7Z5K2 1190 aa22.26■■□□□ 1.15
COX4I1-215ENST00000568339 DIP2AQ14689 1571 aa22.24■■□□□ 1.15
COX4I1-215ENST00000568339 ADAMTSL3P82987 1691 aa22.24■■□□□ 1.15
COX4I1-215ENST00000568339 SHPRHQ149N8 1683 aa22.24■■□□□ 1.15
COX4I1-215ENST00000568339 RNF123Q5XPI4 1314 aa22.24■■□□□ 1.15
COX4I1-215ENST00000568339 ADGRB2O60241 1585 aa22.24■■□□□ 1.15
COX4I1-215ENST00000568339 RIMS1Q86UR5 1692 aaKnown RBP22.24■■□□□ 1.15
COX4I1-215ENST00000568339 EID1Q9Y6B2 187 aa22.23■■□□□ 1.15
COX4I1-215ENST00000568339 TXNDC2Q86VQ3 553 aa22.23■■□□□ 1.15
COX4I1-215ENST00000568339 THEMISQ8N1K5 641 aaPredicted RBP22.22■■□□□ 1.15
COX4I1-215ENST00000568339 KIF20BQ96Q89 1820 aa22.22■■□□□ 1.15
COX4I1-215ENST00000568339 CEP170BQ9Y4F5 1589 aaPredicted RBP22.21■■□□□ 1.15
COX4I1-215ENST00000568339 WASLO00401 505 aaPredicted RBP22.2■■□□□ 1.15
COX4I1-215ENST00000568339 HDGFL2Q7Z4V5 671 aaPredicted RBP22.2■■□□□ 1.14
COX4I1-215ENST00000568339 PPP4R2Q9NY27 417 aa22.2■■□□□ 1.14
COX4I1-215ENST00000568339 ZNF142P52746 1687 aaPredicted RBP22.19■■□□□ 1.14
COX4I1-215ENST00000568339 TBX22Q9Y458 520 aa22.18■■□□□ 1.14
COX4I1-215ENST00000568339 ROBO2Q9HCK4 1378 aa22.17■■□□□ 1.14
COX4I1-215ENST00000568339 DEKP35659 375 aaKnown RBP22.17■■□□□ 1.14
COX4I1-215ENST00000568339 CABP1Q9NZU7 370 aa22.17■■□□□ 1.14
COX4I1-215ENST00000568339 CPSF1Q10570 1443 aaKnown RBP22.16■■□□□ 1.14
COX4I1-215ENST00000568339 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.16■■□□□ 1.14
COX4I1-215ENST00000568339 SENP3-EIF4A1A0A087X0R7 540 aa22.15■■□□□ 1.14
COX4I1-215ENST00000568339 NGEFQ8N5V2 710 aa22.15■■□□□ 1.14
COX4I1-215ENST00000568339 PTPRUQ92729 1446 aa22.15■■□□□ 1.14
COX4I1-215ENST00000568339 CDC42BPGQ6DT37 1551 aa22.15■■□□□ 1.14
COX4I1-215ENST00000568339 ZNF521Q96K83 1311 aa22.15■■□□□ 1.14
COX4I1-215ENST00000568339 PTCH1Q13635 1447 aa22.14■■□□□ 1.14
COX4I1-215ENST00000568339 MON2Q7Z3U7 1717 aa22.14■■□□□ 1.13
COX4I1-215ENST00000568339 FYB1O15117 783 aa22.14■■□□□ 1.13
COX4I1-215ENST00000568339 AKAP12Q02952 1782 aa22.14■■□□□ 1.13
COX4I1-215ENST00000568339 PPIP5K1Q6PFW1 1433 aa22.13■■□□□ 1.13
COX4I1-215ENST00000568339 XRN1Q8IZH2 1706 aaKnown RBP22.12■■□□□ 1.13
COX4I1-215ENST00000568339 TOPAZ1Q8N9V7 1692 aa22.12■■□□□ 1.13
COX4I1-215ENST00000568339 MTHFSP49914 203 aa22.12■■□□□ 1.13
COX4I1-215ENST00000568339 CFAP53Q96M91 514 aa22.11■■□□□ 1.13
COX4I1-215ENST00000568339 SALL2Q9Y467 1007 aaPredicted RBP22.11■■□□□ 1.13
COX4I1-215ENST00000568339 ITSN1Q15811 1721 aa22.1■■□□□ 1.13
COX4I1-215ENST00000568339 EDC4Q6P2E9 1401 aaKnown RBP22.1■■□□□ 1.13
COX4I1-215ENST00000568339 SETD1BQ9UPS6 1966 aaKnown RBP22.1■■□□□ 1.13
COX4I1-215ENST00000568339 TNNT2P45379 298 aaPredicted RBP22.09■■□□□ 1.13
COX4I1-215ENST00000568339 NUDT16Q96DE0 195 aaKnown RBP22.09■■□□□ 1.13
COX4I1-215ENST00000568339 CCDC61Q9Y6R9 512 aa22.09■■□□□ 1.13
COX4I1-215ENST00000568339 PIK3R4Q99570 1358 aa22.09■■□□□ 1.13
COX4I1-215ENST00000568339 CDCA7LQ96GN5 454 aa22.08■■□□□ 1.13
COX4I1-215ENST00000568339 SLC26A8Q96RN1 970 aa22.08■■□□□ 1.13
COX4I1-215ENST00000568339 GGNBP2Q9H3C7 697 aa22.08■■□□□ 1.13
COX4I1-215ENST00000568339 COL3A1P02461 1466 aaPredicted RBP22.08■■□□□ 1.13
COX4I1-215ENST00000568339 PLPPR3Q6T4P5 718 aa22.07■■□□□ 1.12
COX4I1-215ENST00000568339 IQSEC2Q5JU85 1478 aa22.05■■□□□ 1.12
COX4I1-215ENST00000568339 RCAN3Q9UKA8 241 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms