RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 ZNF592Q92610 1267 aa13.38□□□□□ -0.27
PALB2-206ENST00000568219 KDM6BO15054 1643 aa13.38□□□□□ -0.27
PALB2-206ENST00000568219 NEK4P51957 841 aa13.38□□□□□ -0.27
PALB2-206ENST00000568219 CIZ1Q9ULV3 898 aaPredicted RBP13.38□□□□□ -0.27
PALB2-206ENST00000568219 NESP48681 1621 aa13.37□□□□□ -0.27
PALB2-206ENST00000568219 AAMPQ13685 434 aa13.37□□□□□ -0.27
PALB2-206ENST00000568219 GGT6Q6P531 493 aa13.37□□□□□ -0.27
PALB2-206ENST00000568219 CDC45O75419 566 aa13.37□□□□□ -0.27
PALB2-206ENST00000568219 MCCP23508 829 aa13.37□□□□□ -0.27
PALB2-206ENST00000568219 GAS2L2Q8NHY3 880 aa13.37□□□□□ -0.27
PALB2-206ENST00000568219 SPDYE4A6NLX3 237 aa13.36□□□□□ -0.27
PALB2-206ENST00000568219 HMOX1P09601 288 aa13.36□□□□□ -0.27
PALB2-206ENST00000568219 TSC1Q92574 1164 aa13.36□□□□□ -0.27
PALB2-206ENST00000568219 PRIM1P49642 420 aaKnown RBP13.36□□□□□ -0.27
PALB2-206ENST00000568219 OFD1O75665 1012 aa13.36□□□□□ -0.27
PALB2-206ENST00000568219 SPC24Q8NBT2 197 aa13.36□□□□□ -0.27
PALB2-206ENST00000568219 GDPD2Q9HCC8 539 aa13.36□□□□□ -0.27
PALB2-206ENST00000568219 KIF16BQ96L93 1317 aa13.35□□□□□ -0.27
PALB2-206ENST00000568219 C9orf84Q5VXU9 1444 aa13.35□□□□□ -0.27
PALB2-206ENST00000568219 ANO2Q9NQ90 1003 aa13.34□□□□□ -0.27
PALB2-206ENST00000568219 PRDM2Q13029 1718 aa13.34□□□□□ -0.27
PALB2-206ENST00000568219 ZSCAN23Q3MJ62 389 aa13.34□□□□□ -0.27
PALB2-206ENST00000568219 KCNJ4P48050 445 aa13.34□□□□□ -0.27
PALB2-206ENST00000568219 WDR63Q8IWG1 891 aa13.34□□□□□ -0.27
PALB2-206ENST00000568219 THUMPD2Q9BTF0 503 aaKnown RBP13.34□□□□□ -0.27
PALB2-206ENST00000568219 SNAPC4Q5SXM2 1469 aa13.34□□□□□ -0.27
PALB2-206ENST00000568219 KDM5BQ9UGL1 1544 aa13.34□□□□□ -0.27
PALB2-206ENST00000568219 TBC1D9Q6ZT07 1266 aa13.33□□□□□ -0.27
PALB2-206ENST00000568219 MTERF4Q7Z6M4 381 aaKnown RBP13.33□□□□□ -0.27
PALB2-206ENST00000568219 CHAMP1Q96JM3 812 aa13.33□□□□□ -0.27
PALB2-206ENST00000568219 CCDC27Q2M243 656 aa13.33□□□□□ -0.28
PALB2-206ENST00000568219 UGGT2Q9NYU1 1516 aa13.33□□□□□ -0.28
PALB2-206ENST00000568219 KLHL40Q2TBA0 621 aa13.33□□□□□ -0.28
PALB2-206ENST00000568219 CABP2Q9NPB3 220 aa13.32□□□□□ -0.28
PALB2-206ENST00000568219 DENND4BO75064 1496 aaPredicted RBP13.32□□□□□ -0.28
PALB2-206ENST00000568219 PHF14O94880 888 aa13.32□□□□□ -0.28
PALB2-206ENST00000568219 INTS3Q68E01 1043 aaKnown RBP13.32□□□□□ -0.28
PALB2-206ENST00000568219 TSPY26PQ9H489 355 aa13.32□□□□□ -0.28
PALB2-206ENST00000568219 GRIN2BQ13224 1484 aa13.32□□□□□ -0.28
PALB2-206ENST00000568219 NPHP1O15259 732 aa13.31□□□□□ -0.28
PALB2-206ENST00000568219 RAB3GAP1Q15042 981 aa13.31□□□□□ -0.28
PALB2-206ENST00000568219 RABEP1Q15276 862 aa13.31□□□□□ -0.28
PALB2-206ENST00000568219 RBSNQ9H1K0 784 aa13.31□□□□□ -0.28
PALB2-206ENST00000568219 PLEKHH2Q8IVE3 1493 aa13.31□□□□□ -0.28
PALB2-206ENST00000568219 CFAP43Q8NDM7 1665 aa13.31□□□□□ -0.28
PALB2-206ENST00000568219 RALGAPBQ86X10 1494 aa13.31□□□□□ -0.28
PALB2-206ENST00000568219 REC8O95072 547 aa13.31□□□□□ -0.28
PALB2-206ENST00000568219 RSPH4AQ5TD94 716 aa13.3□□□□□ -0.28
PALB2-206ENST00000568219 TOPBP1Q92547 1522 aa13.3□□□□□ -0.28
PALB2-206ENST00000568219 THOC2Q8NI27 1593 aaKnown RBP13.3□□□□□ -0.28
PALB2-206ENST00000568219 SASS6Q6UVJ0 657 aa13.3□□□□□ -0.28
PALB2-206ENST00000568219 USP25Q9UHP3 1055 aa13.3□□□□□ -0.28
PALB2-206ENST00000568219 PZPP20742 1482 aa13.29□□□□□ -0.28
PALB2-206ENST00000568219 SMARCA5O60264 1052 aaPredicted RBP13.29□□□□□ -0.28
PALB2-206ENST00000568219 PPP4R3BQ5MIZ7 849 aa13.29□□□□□ -0.28
PALB2-206ENST00000568219 FIBPO43427 364 aa13.29□□□□□ -0.28
PALB2-206ENST00000568219 OS9Q13438 667 aaPredicted RBP13.29□□□□□ -0.28
PALB2-206ENST00000568219 IFT57Q9NWB7 429 aa13.29□□□□□ -0.28
PALB2-206ENST00000568219 NINLQ9Y2I6 1382 aa13.28□□□□□ -0.28
PALB2-206ENST00000568219 DIAPH1O60610 1272 aaKnown RBP13.28□□□□□ -0.28
PALB2-206ENST00000568219 ZGPATQ8N5A5 531 aaKnown RBP13.28□□□□□ -0.28
PALB2-206ENST00000568219 CFAP44Q96MT7 982 aa13.28□□□□□ -0.28
PALB2-206ENST00000568219 C17orf53Q8N3J3 647 aaPredicted RBP13.28□□□□□ -0.28
PALB2-206ENST00000568219 TTC12Q9H892 705 aaPredicted RBP13.28□□□□□ -0.28
PALB2-206ENST00000568219 CARMIL2Q6F5E8 1435 aa13.28□□□□□ -0.28
PALB2-206ENST00000568219 CD2BP2O95400 341 aaKnown RBP13.28□□□□□ -0.28
PALB2-206ENST00000568219 EFCAB2Q5VUJ9 269 aa13.28□□□□□ -0.28
PALB2-206ENST00000568219 SMC5Q8IY18 1101 aa13.28□□□□□ -0.28
PALB2-206ENST00000568219 UPF3BQ9BZI7 483 aaKnown RBP13.28□□□□□ -0.28
PALB2-206ENST00000568219 NAP1L2Q9ULW6 460 aaPredicted RBP13.28□□□□□ -0.28
PALB2-206ENST00000568219 KIF3AQ9Y496 699 aa13.28□□□□□ -0.28
PALB2-206ENST00000568219 SPAG9O60271 1321 aaKnown RBP13.28□□□□□ -0.28
PALB2-206ENST00000568219 NECTIN2Q92692 538 aa13.27□□□□□ -0.28
PALB2-206ENST00000568219 CARD14Q9BXL6 1004 aa13.27□□□□□ -0.28
PALB2-206ENST00000568219 CAMSAP2Q08AD1 1489 aa13.27□□□□□ -0.29
PALB2-206ENST00000568219 TMPOP42166 694 aaKnown RBP13.27□□□□□ -0.29
PALB2-206ENST00000568219 AFAP1Q8N556 730 aa13.27□□□□□ -0.29
PALB2-206ENST00000568219 LARP6Q9BRS8 491 aaKnown RBP13.27□□□□□ -0.29
PALB2-206ENST00000568219 ZKSCAN5Q9Y2L8 839 aa13.27□□□□□ -0.29
PALB2-206ENST00000568219 MINK1Q8N4C8 1332 aaPredicted RBP13.27□□□□□ -0.29
PALB2-206ENST00000568219 TROQ12816 1431 aaPredicted RBP13.26□□□□□ -0.29
PALB2-206ENST00000568219 MBD3O95983 291 aa13.26□□□□□ -0.29
PALB2-206ENST00000568219 GOLGA6L6A8MZA4 724 aa13.26□□□□□ -0.29
PALB2-206ENST00000568219 HMGN5P82970 282 aaKnown RBP13.26□□□□□ -0.29
PALB2-206ENST00000568219 PKP1Q13835 747 aa13.26□□□□□ -0.29
PALB2-206ENST00000568219 GCC1Q96CN9 775 aa13.26□□□□□ -0.29
PALB2-206ENST00000568219 DYNC1I1O14576 645 aa13.26□□□□□ -0.29
PALB2-206ENST00000568219 C16orf71Q8IYS4 520 aaPredicted RBP13.26□□□□□ -0.29
PALB2-206ENST00000568219 PDCL2Q8N4E4 241 aa13.26□□□□□ -0.29
PALB2-206ENST00000568219 ABCA10Q8WWZ4 1543 aa13.26□□□□□ -0.29
PALB2-206ENST00000568219 VPS37CA5D8V6 355 aaPredicted RBP13.25□□□□□ -0.29
PALB2-206ENST00000568219 PRKAR2BP31323 418 aa13.25□□□□□ -0.29
PALB2-206ENST00000568219 ZRSR1Q15695 479 aaKnown RBP13.25□□□□□ -0.29
PALB2-206ENST00000568219 CGNQ9P2M7 1197 aaKnown RBP13.25□□□□□ -0.29
PALB2-206ENST00000568219 BLMP54132 1417 aaPredicted RBP13.25□□□□□ -0.29
PALB2-206ENST00000568219 KANK1Q14678 1352 aa13.25□□□□□ -0.29
PALB2-206ENST00000568219 UNC13AQ9UPW8 1703 aa13.25□□□□□ -0.29
PALB2-206ENST00000568219 FGD1P98174 961 aa13.24□□□□□ -0.29
PALB2-206ENST00000568219 FBXW7Q969H0 707 aa13.24□□□□□ -0.29
PALB2-206ENST00000568219 TNNT3P45378 269 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms