RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 RABEP1Q15276 862 aa15.04■□□□□ -0
CSPG4P13-202ENST00000567704 ARGLU1Q9NWB6 273 aaPredicted RBP15.04■□□□□ -0
CSPG4P13-202ENST00000567704 PRDM10Q9NQV6 1147 aa15.04■□□□□ -0
CSPG4P13-202ENST00000567704 K7ELQ4 463 aaPredicted RBP15.03■□□□□ -0
CSPG4P13-202ENST00000567704 GORABQ5T7V8 394 aa15.03■□□□□ -0
CSPG4P13-202ENST00000567704 SPC24Q8NBT2 197 aa15.03■□□□□ -0
CSPG4P13-202ENST00000567704 DIAPH1O60610 1272 aaKnown RBP15.03■□□□□ -0
CSPG4P13-202ENST00000567704 TRIM5Q9C035 493 aa15.03■□□□□ -0
CSPG4P13-202ENST00000567704 NPHP1O15259 732 aa15.03■□□□□ -0
CSPG4P13-202ENST00000567704 PDCL3Q9H2J4 239 aa15.02■□□□□ -0
CSPG4P13-202ENST00000567704 CCDC27Q2M243 656 aa15.02□□□□□ -0.01
CSPG4P13-202ENST00000567704 CHMP4AQ9BY43 222 aa15.02□□□□□ -0.01
CSPG4P13-202ENST00000567704 RUFY2Q8WXA3 655 aa15.02□□□□□ -0.01
CSPG4P13-202ENST00000567704 CIZ1Q9ULV3 898 aaPredicted RBP15.01□□□□□ -0.01
CSPG4P13-202ENST00000567704 MAGI1Q96QZ7 1491 aaPredicted RBP15.01□□□□□ -0.01
CSPG4P13-202ENST00000567704 PRXQ9BXM0 1461 aa15.01□□□□□ -0.01
CSPG4P13-202ENST00000567704 KIF21AQ7Z4S6 1674 aa15.01□□□□□ -0.01
CSPG4P13-202ENST00000567704 PES1O00541 588 aaKnown RBP15.01□□□□□ -0.01
CSPG4P13-202ENST00000567704 EXOSC9Q06265 439 aaKnown RBP15.01□□□□□ -0.01
CSPG4P13-202ENST00000567704 C1orf115Q9H7X2 142 aa15□□□□□ -0.01
CSPG4P13-202ENST00000567704 MLECQ14165 292 aa15□□□□□ -0.01
CSPG4P13-202ENST00000567704 NBPF1Q3BBV0 1214 aa15□□□□□ -0.01
CSPG4P13-202ENST00000567704 WASHC2CQ9Y4E1 1318 aa15□□□□□ -0.01
CSPG4P13-202ENST00000567704 FIBPO43427 364 aa15□□□□□ -0.01
CSPG4P13-202ENST00000567704 CCDC9Q9Y3X0 531 aaKnown RBP15□□□□□ -0.01
CSPG4P13-202ENST00000567704 MTHFSP49914 203 aa14.99□□□□□ -0.01
CSPG4P13-202ENST00000567704 SYNJ2O15056 1496 aa14.99□□□□□ -0.01
CSPG4P13-202ENST00000567704 TBC1D2Q9BYX2 928 aa14.99□□□□□ -0.01
CSPG4P13-202ENST00000567704 EVC2Q86UK5 1308 aa14.99□□□□□ -0.01
CSPG4P13-202ENST00000567704 RASSF8Q8NHQ8 419 aa14.99□□□□□ -0.01
CSPG4P13-202ENST00000567704 XPCQ01831 940 aaPredicted RBP14.98□□□□□ -0.01
CSPG4P13-202ENST00000567704 ZNF608Q9ULD9 1512 aaPredicted RBP14.98□□□□□ -0.01
CSPG4P13-202ENST00000567704 TRHP20396 242 aaPredicted RBP14.98□□□□□ -0.01
CSPG4P13-202ENST00000567704 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.98□□□□□ -0.01
CSPG4P13-202ENST00000567704 LETM1O95202 739 aaPredicted RBP14.98□□□□□ -0.01
CSPG4P13-202ENST00000567704 NECTIN2Q92692 538 aa14.98□□□□□ -0.01
CSPG4P13-202ENST00000567704 TSR2Q969E8 191 aaKnown RBP14.98□□□□□ -0.01
CSPG4P13-202ENST00000567704 CCDC73Q6ZRK6 1079 aa14.97□□□□□ -0.01
CSPG4P13-202ENST00000567704 NCOA2Q15596 1464 aa14.97□□□□□ -0.01
CSPG4P13-202ENST00000567704 CWC22Q9HCG8 908 aaKnown RBP14.97□□□□□ -0.01
CSPG4P13-202ENST00000567704 WDR62O43379 1518 aa14.97□□□□□ -0.01
CSPG4P13-202ENST00000567704 MAPK8IP2Q13387 824 aaPredicted RBP14.97□□□□□ -0.01
CSPG4P13-202ENST00000567704 CYB5RLQ6IPT4 315 aa14.97□□□□□ -0.01
CSPG4P13-202ENST00000567704 ZNF330Q9Y3S2 320 aaPredicted RBP14.97□□□□□ -0.01
CSPG4P13-202ENST00000567704 NOM1Q5C9Z4 860 aaKnown RBP14.96□□□□□ -0.01
CSPG4P13-202ENST00000567704 PRDM2Q13029 1718 aa14.96□□□□□ -0.01
CSPG4P13-202ENST00000567704 FOSBP53539 338 aa14.96□□□□□ -0.01
CSPG4P13-202ENST00000567704 CBX1P83916 185 aa14.96□□□□□ -0.01
CSPG4P13-202ENST00000567704 LTV1Q96GA3 475 aaPredicted RBP14.96□□□□□ -0.01
CSPG4P13-202ENST00000567704 CUL7Q14999 1698 aa14.96□□□□□ -0.01
CSPG4P13-202ENST00000567704 TPM1P09493 284 aa14.96□□□□□ -0.01
CSPG4P13-202ENST00000567704 HDGFP51858 240 aaKnown RBP14.96□□□□□ -0.01
CSPG4P13-202ENST00000567704 GNAI1P63096 354 aa14.96□□□□□ -0.01
CSPG4P13-202ENST00000567704 ROCK1Q13464 1354 aa14.96□□□□□ -0.01
CSPG4P13-202ENST00000567704 TSR1Q2NL82 804 aaKnown RBP14.96□□□□□ -0.02
CSPG4P13-202ENST00000567704 NOB1Q9ULX3 412 aaKnown RBP14.96□□□□□ -0.02
CSPG4P13-202ENST00000567704 AMPHP49418 695 aa14.95□□□□□ -0.02
CSPG4P13-202ENST00000567704 MVPQ14764 893 aaKnown RBP14.95□□□□□ -0.02
CSPG4P13-202ENST00000567704 NUTM2FA1L443 756 aa14.95□□□□□ -0.02
CSPG4P13-202ENST00000567704 HMOX1P09601 288 aa14.95□□□□□ -0.02
CSPG4P13-202ENST00000567704 TOMM22Q9NS69 142 aa14.95□□□□□ -0.02
CSPG4P13-202ENST00000567704 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.95□□□□□ -0.02
CSPG4P13-202ENST00000567704 CCDC112Q8NEF3 446 aa14.95□□□□□ -0.02
CSPG4P13-202ENST00000567704 SYCE3A1L190 88 aa14.95□□□□□ -0.02
CSPG4P13-202ENST00000567704 FKBP5Q13451 457 aaPredicted RBP14.95□□□□□ -0.02
CSPG4P13-202ENST00000567704 PDCL2Q8N4E4 241 aa14.95□□□□□ -0.02
CSPG4P13-202ENST00000567704 GCC1Q96CN9 775 aa14.95□□□□□ -0.02
CSPG4P13-202ENST00000567704 MCM2P49736 904 aa14.94□□□□□ -0.02
CSPG4P13-202ENST00000567704 HSP90B2PQ58FF3 399 aa14.94□□□□□ -0.02
CSPG4P13-202ENST00000567704 SLFN5Q08AF3 891 aa14.94□□□□□ -0.02
CSPG4P13-202ENST00000567704 PRG4Q92954 1404 aaPredicted RBP14.94□□□□□ -0.02
CSPG4P13-202ENST00000567704 MINK1Q8N4C8 1332 aaPredicted RBP14.94□□□□□ -0.02
CSPG4P13-202ENST00000567704 HFM1A2PYH4 1435 aa14.94□□□□□ -0.02
CSPG4P13-202ENST00000567704 CLCN1P35523 988 aa14.94□□□□□ -0.02
CSPG4P13-202ENST00000567704 GGNBP2Q9H3C7 697 aa14.94□□□□□ -0.02
CSPG4P13-202ENST00000567704 ZHX1Q9UKY1 873 aaPredicted RBP14.94□□□□□ -0.02
CSPG4P13-202ENST00000567704 IFIT2P09913 472 aaKnown RBP14.93□□□□□ -0.02
CSPG4P13-202ENST00000567704 XRCC6P12956 609 aaKnown RBP eCLIP14.93□□□□□ -0.02
CSPG4P13-202ENST00000567704 RNF20Q5VTR2 975 aa14.93□□□□□ -0.02
CSPG4P13-202ENST00000567704 CWC15Q9P013 229 aaKnown RBP14.93□□□□□ -0.02
CSPG4P13-202ENST00000567704 SDF4Q9BRK5 362 aa14.93□□□□□ -0.02
CSPG4P13-202ENST00000567704 ANKRD50Q9ULJ7 1429 aa14.93□□□□□ -0.02
CSPG4P13-202ENST00000567704 PANK2Q9BZ23 570 aa14.92□□□□□ -0.02
CSPG4P13-202ENST00000567704 CCDC70Q6NSX1 233 aa14.92□□□□□ -0.02
CSPG4P13-202ENST00000567704 CHD1LQ86WJ1 897 aa14.92□□□□□ -0.02
CSPG4P13-202ENST00000567704 CHMP4CQ96CF2 233 aa14.92□□□□□ -0.02
CSPG4P13-202ENST00000567704 KIAA0586Q9BVV6 1533 aa14.92□□□□□ -0.02
CSPG4P13-202ENST00000567704 COG3Q96JB2 828 aa14.92□□□□□ -0.02
CSPG4P13-202ENST00000567704 PDE4CQ08493 712 aa14.91□□□□□ -0.02
CSPG4P13-202ENST00000567704 CASKIN1Q8WXD9 1431 aa14.91□□□□□ -0.02
CSPG4P13-202ENST00000567704 TNPO1Q92973 898 aaKnown RBP14.91□□□□□ -0.02
CSPG4P13-202ENST00000567704 EIF2S2P20042 333 aaKnown RBP14.91□□□□□ -0.02
CSPG4P13-202ENST00000567704 TAF7LQ5H9L4 462 aa14.91□□□□□ -0.02
CSPG4P13-202ENST00000567704 NINLQ9Y2I6 1382 aa14.91□□□□□ -0.02
CSPG4P13-202ENST00000567704 ATF7IPQ6VMQ6 1270 aa14.91□□□□□ -0.02
CSPG4P13-202ENST00000567704 GRIN2AQ12879 1464 aa14.91□□□□□ -0.02
CSPG4P13-202ENST00000567704 FMNL2Q96PY5 1086 aa14.9□□□□□ -0.02
CSPG4P13-202ENST00000567704 C9orf78Q9NZ63 289 aaPredicted RBP14.9□□□□□ -0.02
CSPG4P13-202ENST00000567704 ERICH4A6NGS2 130 aa14.9□□□□□ -0.02
CSPG4P13-202ENST00000567704 CLSTN1O94985 981 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms