RNA–Protein interactions for RNA: ENST00000566901.5

CFDP1-207, Transcript of craniofacial development protein 1, humanhuman

TSL 1 (best)

Gene CFDP1, Length 1,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-207ENST00000566901 DLC1Q96QB1 1528 aa17.47■□□□□ 0.39
CFDP1-207ENST00000566901 NUTM2DQ5VT03 806 aaPredicted RBP17.47■□□□□ 0.39
CFDP1-207ENST00000566901 ARHGEF28Q8N1W1 1705 aaKnown RBP17.47■□□□□ 0.39
CFDP1-207ENST00000566901 TESK2Q96S53 571 aa17.46■□□□□ 0.39
CFDP1-207ENST00000566901 U3KPZ7 1027 aaPredicted RBP17.46■□□□□ 0.39
CFDP1-207ENST00000566901 YTHDC2Q9H6S0 1430 aaKnown RBP17.46■□□□□ 0.39
CFDP1-207ENST00000566901 KNDC1Q76NI1 1749 aa17.45■□□□□ 0.38
CFDP1-207ENST00000566901 ADAMTS13Q76LX8 1427 aa17.45■□□□□ 0.38
CFDP1-207ENST00000566901 LRPPRCP42704 1394 aaKnown RBP17.44■□□□□ 0.38
CFDP1-207ENST00000566901 BCANQ96GW7 911 aa17.44■□□□□ 0.38
CFDP1-207ENST00000566901 KIF7Q2M1P5 1343 aa17.44■□□□□ 0.38
CFDP1-207ENST00000566901 TECPR2O15040 1411 aa17.43■□□□□ 0.38
CFDP1-207ENST00000566901 CENPJQ9HC77 1338 aaPredicted RBP17.42■□□□□ 0.38
CFDP1-207ENST00000566901 ABCC11Q96J66 1382 aa17.41■□□□□ 0.38
CFDP1-207ENST00000566901 QRICH2Q9H0J4 1663 aa17.41■□□□□ 0.38
CFDP1-207ENST00000566901 C11orf95C9JLR9 678 aaPredicted RBP17.4■□□□□ 0.38
CFDP1-207ENST00000566901 TMF1P82094 1093 aa17.4■□□□□ 0.38
CFDP1-207ENST00000566901 CDCA8Q53HL2 280 aa17.39■□□□□ 0.37
CFDP1-207ENST00000566901 TMEM132EQ6IEE7 984 aa17.39■□□□□ 0.37
CFDP1-207ENST00000566901 TMEM94Q12767 1356 aa17.39■□□□□ 0.37
CFDP1-207ENST00000566901 PIK3R4Q99570 1358 aa17.39■□□□□ 0.37
CFDP1-207ENST00000566901 SLC26A8Q96RN1 970 aa17.38■□□□□ 0.37
CFDP1-207ENST00000566901 TBX22Q9Y458 520 aa17.38■□□□□ 0.37
CFDP1-207ENST00000566901 FAM135BQ49AJ0 1406 aa17.38■□□□□ 0.37
CFDP1-207ENST00000566901 ROBO1Q9Y6N7 1651 aa17.37■□□□□ 0.37
CFDP1-207ENST00000566901 PROSER2Q86WR7 435 aaPredicted RBP17.37■□□□□ 0.37
CFDP1-207ENST00000566901 SIRT1Q96EB6 747 aa17.37■□□□□ 0.37
CFDP1-207ENST00000566901 METP08581 1390 aa17.37■□□□□ 0.37
CFDP1-207ENST00000566901 TRAK1Q9UPV9 953 aa17.36■□□□□ 0.37
CFDP1-207ENST00000566901 DDX10Q13206 875 aaKnown RBP17.35■□□□□ 0.37
CFDP1-207ENST00000566901 RBM33Q96EV2 1170 aaKnown RBP17.35■□□□□ 0.37
CFDP1-207ENST00000566901 KCNA6P17658 529 aa17.34■□□□□ 0.37
CFDP1-207ENST00000566901 PTCH1Q13635 1447 aa17.34■□□□□ 0.37
CFDP1-207ENST00000566901 PUS7Q96PZ0 661 aaKnown RBP17.34■□□□□ 0.37
CFDP1-207ENST00000566901 XRN1Q8IZH2 1706 aaKnown RBP17.33■□□□□ 0.37
CFDP1-207ENST00000566901 NKTRP30414 1462 aaKnown RBP17.33■□□□□ 0.37
CFDP1-207ENST00000566901 MSH6P52701 1360 aa17.32■□□□□ 0.36
CFDP1-207ENST00000566901 NWD1Q149M9 1564 aa17.32■□□□□ 0.36
CFDP1-207ENST00000566901 TULP4Q9NRJ4 1543 aa17.31■□□□□ 0.36
CFDP1-207ENST00000566901 PHLPP1O60346 1717 aa17.31■□□□□ 0.36
CFDP1-207ENST00000566901 MYOM1P52179 1685 aa17.29■□□□□ 0.36
CFDP1-207ENST00000566901 ADGRB2O60241 1585 aa17.29■□□□□ 0.36
CFDP1-207ENST00000566901 STK26Q9P289 416 aa17.29■□□□□ 0.36
CFDP1-207ENST00000566901 PTPRUQ92729 1446 aa17.29■□□□□ 0.36
CFDP1-207ENST00000566901 C14orf37Q86TY3 774 aa17.28■□□□□ 0.36
CFDP1-207ENST00000566901 PRAM1Q96QH2 718 aa17.28■□□□□ 0.36
CFDP1-207ENST00000566901 CHD2O14647 1828 aaKnown RBP17.28■□□□□ 0.36
CFDP1-207ENST00000566901 EVC2Q86UK5 1308 aa17.27■□□□□ 0.36
CFDP1-207ENST00000566901 POGKQ9P215 609 aa17.27■□□□□ 0.36
CFDP1-207ENST00000566901 NINLQ9Y2I6 1382 aa17.26■□□□□ 0.35
CFDP1-207ENST00000566901 RGS17Q9UGC6 210 aaPredicted RBP17.25■□□□□ 0.35
CFDP1-207ENST00000566901 ROBO2Q9HCK4 1378 aa17.25■□□□□ 0.35
CFDP1-207ENST00000566901 ATAD2Q6PL18 1390 aa17.23■□□□□ 0.35
CFDP1-207ENST00000566901 PLEKHH1Q9ULM0 1364 aa17.23■□□□□ 0.35
CFDP1-207ENST00000566901 POLR3GLQ9BT43 218 aa17.22■□□□□ 0.35
CFDP1-207ENST00000566901 SLAIN2Q9P270 581 aa17.21■□□□□ 0.35
CFDP1-207ENST00000566901 AMOTL2Q9Y2J4 779 aa17.21■□□□□ 0.35
CFDP1-207ENST00000566901 ANP32CO43423 234 aa17.2■□□□□ 0.34
CFDP1-207ENST00000566901 POTEAQ6S8J7 498 aa17.2■□□□□ 0.34
CFDP1-207ENST00000566901 MIER1Q8N108 512 aa17.2■□□□□ 0.34
CFDP1-207ENST00000566901 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.19■□□□□ 0.34
CFDP1-207ENST00000566901 KTN1Q86UP2 1357 aaKnown RBP17.19■□□□□ 0.34
CFDP1-207ENST00000566901 JCADQ9P266 1359 aa17.19■□□□□ 0.34
CFDP1-207ENST00000566901 MEX3CQ5U5Q3 659 aaKnown RBP17.19■□□□□ 0.34
CFDP1-207ENST00000566901 WAPLQ7Z5K2 1190 aa17.19■□□□□ 0.34
CFDP1-207ENST00000566901 MINK1Q8N4C8 1332 aaPredicted RBP17.19■□□□□ 0.34
CFDP1-207ENST00000566901 COL16A1Q07092 1604 aaPredicted RBP17.18■□□□□ 0.34
CFDP1-207ENST00000566901 SAFB2Q14151 953 aaKnown RBP eCLIP17.17■□□□□ 0.34
CFDP1-207ENST00000566901 NPC1L1Q9UHC9 1359 aa17.16■□□□□ 0.34
CFDP1-207ENST00000566901 USP32Q8NFA0 1604 aa17.16■□□□□ 0.34
CFDP1-207ENST00000566901 WASLO00401 505 aaPredicted RBP17.15■□□□□ 0.34
CFDP1-207ENST00000566901 PER1O15534 1290 aaPredicted RBP17.15■□□□□ 0.34
CFDP1-207ENST00000566901 ATF3P18847 181 aa17.15■□□□□ 0.34
CFDP1-207ENST00000566901 CDC42BPGQ6DT37 1551 aa17.15■□□□□ 0.34
CFDP1-207ENST00000566901 ATP7BP35670 1465 aa17.14■□□□□ 0.33
CFDP1-207ENST00000566901 CCER2I3L3R5 266 aa17.14■□□□□ 0.33
CFDP1-207ENST00000566901 PANK3Q9H999 370 aa17.14■□□□□ 0.33
CFDP1-207ENST00000566901 ANKRD36BQ8N2N9 1353 aa17.14■□□□□ 0.33
CFDP1-207ENST00000566901 SRPK2P78362 688 aaKnown RBP17.13■□□□□ 0.33
CFDP1-207ENST00000566901 CDK19Q9BWU1 502 aa17.13■□□□□ 0.33
CFDP1-207ENST00000566901 PRKRIP1Q9H875 184 aaPredicted RBP17.13■□□□□ 0.33
CFDP1-207ENST00000566901 TOPAZ1Q8N9V7 1692 aa17.13■□□□□ 0.33
CFDP1-207ENST00000566901 CADPS2Q86UW7 1296 aa17.12■□□□□ 0.33
CFDP1-207ENST00000566901 CABP2Q9NPB3 220 aa17.12■□□□□ 0.33
CFDP1-207ENST00000566901 ADGRL3Q9HAR2 1447 aa17.12■□□□□ 0.33
CFDP1-207ENST00000566901 NALCNQ8IZF0 1738 aa17.11■□□□□ 0.33
CFDP1-207ENST00000566901 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
CFDP1-207ENST00000566901 ANKARQ7Z5J8 1434 aa17.11■□□□□ 0.33
CFDP1-207ENST00000566901 NCOA3Q9Y6Q9 1424 aa17.11■□□□□ 0.33
CFDP1-207ENST00000566901 SHPRHQ149N8 1683 aa17.1■□□□□ 0.33
CFDP1-207ENST00000566901 PARD3Q8TEW0 1356 aa17.1■□□□□ 0.33
CFDP1-207ENST00000566901 LRP6O75581 1613 aa17.1■□□□□ 0.33
CFDP1-207ENST00000566901 AHDC1Q5TGY3 1603 aaPredicted RBP17.1■□□□□ 0.33
CFDP1-207ENST00000566901 ITSN1Q15811 1721 aa17.1■□□□□ 0.33
CFDP1-207ENST00000566901 FMN2Q9NZ56 1722 aa17.1■□□□□ 0.33
CFDP1-207ENST00000566901 RALBP1Q15311 655 aa17.09■□□□□ 0.33
CFDP1-207ENST00000566901 KNSTRNQ9Y448 316 aa17.09■□□□□ 0.33
CFDP1-207ENST00000566901 CD163L1Q9NR16 1453 aa17.08■□□□□ 0.32
CFDP1-207ENST00000566901 SPATA31A6Q5VVP1 1343 aa17.08■□□□□ 0.32
CFDP1-207ENST00000566901 C19orf44Q9H6X5 657 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms