RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 NBPF26B4DH59 902 aa9.61□□□□□ -0.87
KARS-208ENST00000566772 GCGRP47871 477 aa9.61□□□□□ -0.87
KARS-208ENST00000566772 USP46P62068 366 aa9.61□□□□□ -0.87
KARS-208ENST00000566772 GUCA2AQ02747 115 aa9.61□□□□□ -0.87
KARS-208ENST00000566772 CDCA8Q53HL2 280 aa9.61□□□□□ -0.87
KARS-208ENST00000566772 SMAPO00193 183 aa9.6□□□□□ -0.87
KARS-208ENST00000566772 HLA-CQ95604 372 aa9.6□□□□□ -0.87
KARS-208ENST00000566772 IVNS1ABPQ9Y6Y0 642 aa9.6□□□□□ -0.87
KARS-208ENST00000566772 E9PSI1 815 aa9.59□□□□□ -0.87
KARS-208ENST00000566772 PACS2Q86VP3 889 aa9.59□□□□□ -0.87
KARS-208ENST00000566772 EPS8L1Q8TE68 723 aa9.59□□□□□ -0.87
KARS-208ENST00000566772 UCN2Q96RP3 112 aa9.59□□□□□ -0.87
KARS-208ENST00000566772 VRTNQ9H8Y1 702 aa9.59□□□□□ -0.87
KARS-208ENST00000566772 BCL2L12Q9HB09 334 aa9.59□□□□□ -0.87
KARS-208ENST00000566772 TRIM6-TRIM34B2RNG4 842 aa9.58□□□□□ -0.88
KARS-208ENST00000566772 PPP1R3GB7ZBB8 358 aa9.58□□□□□ -0.88
KARS-208ENST00000566772 PRR7Q8TB68 274 aa9.58□□□□□ -0.88
KARS-208ENST00000566772 TSC1Q92574 1164 aa9.58□□□□□ -0.88
KARS-208ENST00000566772 LHX6Q9UPM6 363 aa9.58□□□□□ -0.88
KARS-208ENST00000566772 LOC105371045A0A1W2PR82 267 aa9.57□□□□□ -0.88
KARS-208ENST00000566772 CCDC27Q2M243 656 aa9.57□□□□□ -0.88
KARS-208ENST00000566772 PPP4R3BQ5MIZ7 849 aa9.57□□□□□ -0.88
KARS-208ENST00000566772 GPR153Q6NV75 609 aa9.57□□□□□ -0.88
KARS-208ENST00000566772 TMEM88BA6NKF7 163 aa9.56□□□□□ -0.88
KARS-208ENST00000566772 IGSF3O75054 1194 aa9.56□□□□□ -0.88
KARS-208ENST00000566772 ATG7O95352 703 aa9.56□□□□□ -0.88
KARS-208ENST00000566772 HOXB3P14651 431 aaPredicted RBP9.56□□□□□ -0.88
KARS-208ENST00000566772 PTPREP23469 700 aa9.56□□□□□ -0.88
KARS-208ENST00000566772 MTMR2Q13614 643 aa9.56□□□□□ -0.88
KARS-208ENST00000566772 HELBQ8NG08 1087 aaPredicted RBP9.56□□□□□ -0.88
KARS-208ENST00000566772 CFAP99D6REC4 459 aa9.55□□□□□ -0.88
KARS-208ENST00000566772 DOK7Q18PE1 504 aa9.55□□□□□ -0.88
KARS-208ENST00000566772 SND1Q7KZF4 910 aaKnown RBP eCLIP9.55□□□□□ -0.88
KARS-208ENST00000566772 SLC10A3P09131 477 aa9.54□□□□□ -0.88
KARS-208ENST00000566772 RSPH4AQ5TD94 716 aa9.54□□□□□ -0.88
KARS-208ENST00000566772 MAFBQ9Y5Q3 323 aaPredicted RBP9.54□□□□□ -0.88
KARS-208ENST00000566772 PROX2Q3B8N5 592 aa9.53□□□□□ -0.88
KARS-208ENST00000566772 SOX11P35716 441 aa9.52□□□□□ -0.89
KARS-208ENST00000566772 SEMA3FQ13275 785 aa9.52□□□□□ -0.89
KARS-208ENST00000566772 TBC1D9Q6ZT07 1266 aa9.52□□□□□ -0.89
KARS-208ENST00000566772 AMOTL2Q9Y2J4 779 aa9.52□□□□□ -0.89
KARS-208ENST00000566772 C6orf229H3BNL8 230 aa9.51□□□□□ -0.89
KARS-208ENST00000566772 NR6A1Q15406 480 aa9.51□□□□□ -0.89
KARS-208ENST00000566772 SPNS2Q8IVW8 549 aa9.51□□□□□ -0.89
KARS-208ENST00000566772 ZSWIM6Q9HCJ5 1215 aa9.51□□□□□ -0.89
KARS-208ENST00000566772 SCUBE2Q9NQ36 999 aa9.51□□□□□ -0.89
KARS-208ENST00000566772 RIMBP2O15034 1052 aa9.49□□□□□ -0.89
KARS-208ENST00000566772 SWT1Q5T5J6 900 aaKnown RBP9.49□□□□□ -0.89
KARS-208ENST00000566772 PSDA5PKW4 1024 aaPredicted RBP9.48□□□□□ -0.89
KARS-208ENST00000566772 SLF2Q8IX21 1173 aa9.48□□□□□ -0.89
KARS-208ENST00000566772 SYMPKQ92797 1274 aaKnown RBP9.48□□□□□ -0.89
KARS-208ENST00000566772 KIAA1468Q9P260 1216 aa9.48□□□□□ -0.89
KARS-208ENST00000566772 ATP9BO43861 1147 aa9.47□□□□□ -0.89
KARS-208ENST00000566772 PER1O15534 1290 aaPredicted RBP9.46□□□□□ -0.9
KARS-208ENST00000566772 KANK4Q5T7N3 995 aaPredicted RBP9.46□□□□□ -0.9
KARS-208ENST00000566772 GNEQ9Y223 722 aaKnown RBP9.46□□□□□ -0.9
KARS-208ENST00000566772 FUT2Q10981 343 aa9.45□□□□□ -0.9
KARS-208ENST00000566772 EIF4G2P78344 907 aaKnown RBP eCLIP9.44□□□□□ -0.9
KARS-208ENST00000566772 PNMA1Q8ND90 353 aa9.44□□□□□ -0.9
KARS-208ENST00000566772 POTEJP0CG39 1038 aa9.43□□□□□ -0.9
KARS-208ENST00000566772 GRIPAP1Q4V328 841 aa9.43□□□□□ -0.9
KARS-208ENST00000566772 KCNK17Q96T54 332 aa9.43□□□□□ -0.9
KARS-208ENST00000566772 UNCXA6NJT0 531 aa9.42□□□□□ -0.9
KARS-208ENST00000566772 PIK3CDO00329 1044 aa9.42□□□□□ -0.9
KARS-208ENST00000566772 TMEM164Q5U3C3 297 aa9.42□□□□□ -0.9
KARS-208ENST00000566772 STK32AQ8WU08 396 aa9.42□□□□□ -0.9
KARS-208ENST00000566772 ZMIZ1Q9ULJ6 1067 aa9.42□□□□□ -0.9
KARS-208ENST00000566772 SHROOM4Q9ULL8 1493 aa9.41□□□□□ -0.9
KARS-208ENST00000566772 ELOAQ14241 798 aaKnown RBP9.41□□□□□ -0.9
KARS-208ENST00000566772 B4GALNT3Q6L9W6 998 aa9.41□□□□□ -0.9
KARS-208ENST00000566772 MYT1LQ9UL68 1186 aa9.41□□□□□ -0.9
KARS-208ENST00000566772 NR1H3Q13133 447 aa9.4□□□□□ -0.9
KARS-208ENST00000566772 PHLDB3Q6NSJ2 640 aa9.4□□□□□ -0.9
KARS-208ENST00000566772 ATP6V1AP38606 617 aa9.39□□□□□ -0.91
KARS-208ENST00000566772 TXNDC2Q86VQ3 553 aa9.39□□□□□ -0.91
KARS-208ENST00000566772 ZBED2Q9BTP6 218 aa9.39□□□□□ -0.91
KARS-208ENST00000566772 SEPT9Q9UHD8 586 aaPredicted RBP9.39□□□□□ -0.91
KARS-208ENST00000566772 NOVA2Q9UNW9 492 aaKnown RBP9.39□□□□□ -0.91
KARS-208ENST00000566772 CFHP08603 1231 aa9.38□□□□□ -0.91
KARS-208ENST00000566772 FBXO45P0C2W1 286 aa9.38□□□□□ -0.91
KARS-208ENST00000566772 HDGFP51858 240 aaKnown RBP9.38□□□□□ -0.91
KARS-208ENST00000566772 CCER1Q8TC90 406 aaPredicted RBP9.38□□□□□ -0.91
KARS-208ENST00000566772 USP17L3A6NCW0 530 aa9.36□□□□□ -0.91
KARS-208ENST00000566772 USP17L4A6NCW7 530 aa9.36□□□□□ -0.91
KARS-208ENST00000566772 SKIP12755 728 aa9.36□□□□□ -0.91
KARS-208ENST00000566772 USP17L2Q6R6M4 530 aa9.36□□□□□ -0.91
KARS-208ENST00000566772 USP17L1Q7RTZ2 530 aa9.36□□□□□ -0.91
KARS-208ENST00000566772 RETREG3Q86VR2 466 aa9.36□□□□□ -0.91
KARS-208ENST00000566772 RBM47A0AV96 593 aaKnown RBP9.35□□□□□ -0.91
KARS-208ENST00000566772 LYPD8Q6UX82 237 aa9.35□□□□□ -0.91
KARS-208ENST00000566772 DEPDC4Q8N2C3 294 aa9.35□□□□□ -0.91
KARS-208ENST00000566772 NFATC2IPQ8NCF5 419 aa9.35□□□□□ -0.91
KARS-208ENST00000566772 SLAIN2Q9P270 581 aa9.35□□□□□ -0.91
KARS-208ENST00000566772 ZBBXA8MT70 800 aa9.34□□□□□ -0.91
KARS-208ENST00000566772 SLC4A3P48751 1232 aa9.34□□□□□ -0.91
KARS-208ENST00000566772 PSEN2P49810 448 aa9.34□□□□□ -0.91
KARS-208ENST00000566772 RABGEF1Q9UJ41 708 aa9.34□□□□□ -0.91
KARS-208ENST00000566772 USP17L5A8MUK1 530 aa9.33□□□□□ -0.92
KARS-208ENST00000566772 SSFA2P28290 1259 aa9.33□□□□□ -0.92
KARS-208ENST00000566772 ARID4AP29374 1257 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms