RNA–Protein interactions for RNA: ENST00000566640.1

SIN3A-207, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-207ENST00000566640 ADAMTS13Q76LX8 1427 aa10.7□□□□□ -0.7
SIN3A-207ENST00000566640 CIZ1Q9ULV3 898 aaPredicted RBP10.7□□□□□ -0.7
SIN3A-207ENST00000566640 TBX22Q9Y458 520 aa10.7□□□□□ -0.7
SIN3A-207ENST00000566640 NCOA3Q9Y6Q9 1424 aa10.69□□□□□ -0.7
SIN3A-207ENST00000566640 MSH6P52701 1360 aa10.69□□□□□ -0.7
SIN3A-207ENST00000566640 RASEFQ8IZ41 740 aa10.69□□□□□ -0.7
SIN3A-207ENST00000566640 FAM212AQ96EL1 285 aa10.69□□□□□ -0.7
SIN3A-207ENST00000566640 ZRANB1Q9UGI0 708 aa10.69□□□□□ -0.7
SIN3A-207ENST00000566640 HDGFP51858 240 aaKnown RBP10.68□□□□□ -0.7
SIN3A-207ENST00000566640 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.68□□□□□ -0.7
SIN3A-207ENST00000566640 PIK3R4Q99570 1358 aa10.67□□□□□ -0.7
SIN3A-207ENST00000566640 IQGAP3Q86VI3 1631 aa10.67□□□□□ -0.7
SIN3A-207ENST00000566640 PPP1R15AO75807 674 aaPredicted RBP10.67□□□□□ -0.7
SIN3A-207ENST00000566640 SLAIN2Q9P270 581 aa10.67□□□□□ -0.7
SIN3A-207ENST00000566640 E9PCH4 1651 aa10.66□□□□□ -0.7
SIN3A-207ENST00000566640 GCC2Q8IWJ2 1684 aa10.66□□□□□ -0.7
SIN3A-207ENST00000566640 ROBO1Q9Y6N7 1651 aa10.66□□□□□ -0.7
SIN3A-207ENST00000566640 NUP155O75694 1391 aa10.66□□□□□ -0.7
SIN3A-207ENST00000566640 GSE1Q14687 1217 aa10.66□□□□□ -0.7
SIN3A-207ENST00000566640 BCANQ96GW7 911 aa10.66□□□□□ -0.7
SIN3A-207ENST00000566640 DIP2AQ14689 1571 aa10.65□□□□□ -0.7
SIN3A-207ENST00000566640 ECM2O94769 699 aaPredicted RBP10.65□□□□□ -0.7
SIN3A-207ENST00000566640 DCAF8Q5TAQ9 597 aa10.65□□□□□ -0.7
SIN3A-207ENST00000566640 CHGAP10645 457 aaKnown RBP10.64□□□□□ -0.71
SIN3A-207ENST00000566640 NUTM2DQ5VT03 806 aaPredicted RBP10.64□□□□□ -0.71
SIN3A-207ENST00000566640 POTEAQ6S8J7 498 aa10.64□□□□□ -0.71
SIN3A-207ENST00000566640 PTPRUQ92729 1446 aa10.64□□□□□ -0.71
SIN3A-207ENST00000566640 RRBP1Q9P2E9 1410 aaKnown RBP10.64□□□□□ -0.71
SIN3A-207ENST00000566640 PELP1Q8IZL8 1130 aaKnown RBP10.63□□□□□ -0.71
SIN3A-207ENST00000566640 JCADQ9P266 1359 aa10.63□□□□□ -0.71
SIN3A-207ENST00000566640 POTEJP0CG39 1038 aa10.62□□□□□ -0.71
SIN3A-207ENST00000566640 C19orf44Q9H6X5 657 aa10.62□□□□□ -0.71
SIN3A-207ENST00000566640 CHD2O14647 1828 aaKnown RBP10.62□□□□□ -0.71
SIN3A-207ENST00000566640 CADPS2Q86UW7 1296 aa10.61□□□□□ -0.71
SIN3A-207ENST00000566640 TSPYL2Q9H2G4 693 aaPredicted RBP10.61□□□□□ -0.71
SIN3A-207ENST00000566640 TRPM2O94759 1503 aa10.61□□□□□ -0.71
SIN3A-207ENST00000566640 COL16A1Q07092 1604 aaPredicted RBP10.61□□□□□ -0.71
SIN3A-207ENST00000566640 SETBP1Q9Y6X0 1596 aa10.6□□□□□ -0.71
SIN3A-207ENST00000566640 DCCP43146 1447 aa10.6□□□□□ -0.71
SIN3A-207ENST00000566640 AMOTL2Q9Y2J4 779 aa10.6□□□□□ -0.71
SIN3A-207ENST00000566640 MYO5BQ9ULV0 1848 aa10.6□□□□□ -0.71
SIN3A-207ENST00000566640 AHDC1Q5TGY3 1603 aaPredicted RBP10.59□□□□□ -0.71
SIN3A-207ENST00000566640 NRXN3Q9Y4C0 1643 aa10.59□□□□□ -0.71
SIN3A-207ENST00000566640 RGL2O15211 777 aa10.59□□□□□ -0.71
SIN3A-207ENST00000566640 SPATA31A6Q5VVP1 1343 aa10.58□□□□□ -0.71
SIN3A-207ENST00000566640 NAIPQ13075 1403 aa10.58□□□□□ -0.72
SIN3A-207ENST00000566640 LRP6O75581 1613 aa10.58□□□□□ -0.72
SIN3A-207ENST00000566640 METP08581 1390 aa10.58□□□□□ -0.72
SIN3A-207ENST00000566640 PAK3O75914 559 aaPredicted RBP10.58□□□□□ -0.72
SIN3A-207ENST00000566640 ATF3P18847 181 aa10.58□□□□□ -0.72
SIN3A-207ENST00000566640 BRINP3Q76B58 766 aa10.58□□□□□ -0.72
SIN3A-207ENST00000566640 C14orf37Q86TY3 774 aa10.58□□□□□ -0.72
SIN3A-207ENST00000566640 FAM163AQ96GL9 167 aaPredicted RBP10.57□□□□□ -0.72
SIN3A-207ENST00000566640 PHLPP1O60346 1717 aa10.57□□□□□ -0.72
SIN3A-207ENST00000566640 XRN1Q8IZH2 1706 aaKnown RBP10.57□□□□□ -0.72
SIN3A-207ENST00000566640 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.56□□□□□ -0.72
SIN3A-207ENST00000566640 NEXMIFQ5QGS0 1516 aa10.56□□□□□ -0.72
SIN3A-207ENST00000566640 MST1RQ04912 1400 aa10.56□□□□□ -0.72
SIN3A-207ENST00000566640 SPHKAPQ2M3C7 1700 aa10.55□□□□□ -0.72
SIN3A-207ENST00000566640 ASXL1Q8IXJ9 1541 aa10.54□□□□□ -0.72
SIN3A-207ENST00000566640 HFM1A2PYH4 1435 aa10.54□□□□□ -0.72
SIN3A-207ENST00000566640 ZNF326Q5BKZ1 582 aaKnown RBP10.54□□□□□ -0.72
SIN3A-207ENST00000566640 PRAG1Q86YV5 1406 aa10.54□□□□□ -0.72
SIN3A-207ENST00000566640 SETD5Q9C0A6 1442 aa10.54□□□□□ -0.72
SIN3A-207ENST00000566640 ADGRL3Q9HAR2 1447 aa10.54□□□□□ -0.72
SIN3A-207ENST00000566640 CLTCL1P53675 1640 aa10.54□□□□□ -0.72
SIN3A-207ENST00000566640 PTCH1Q13635 1447 aa10.52□□□□□ -0.73
SIN3A-207ENST00000566640 PYGBP11216 843 aa10.52□□□□□ -0.73
SIN3A-207ENST00000566640 RNF25Q96BH1 459 aaPredicted RBP10.52□□□□□ -0.73
SIN3A-207ENST00000566640 METRNQ9UJH8 293 aa10.52□□□□□ -0.73
SIN3A-207ENST00000566640 CCDC61Q9Y6R9 512 aa10.52□□□□□ -0.73
SIN3A-207ENST00000566640 SHPRHQ149N8 1683 aa10.51□□□□□ -0.73
SIN3A-207ENST00000566640 ZNF772Q68DY9 489 aaPredicted RBP10.51□□□□□ -0.73
SIN3A-207ENST00000566640 MAMSTRQ6ZN01 415 aa10.51□□□□□ -0.73
SIN3A-207ENST00000566640 CHRM1P11229 460 aaPredicted RBP10.5□□□□□ -0.73
SIN3A-207ENST00000566640 PHF12Q96QT6 1004 aa10.5□□□□□ -0.73
SIN3A-207ENST00000566640 ROBO2Q9HCK4 1378 aa10.5□□□□□ -0.73
SIN3A-207ENST00000566640 VGFO15240 615 aaPredicted RBP10.49□□□□□ -0.73
SIN3A-207ENST00000566640 MEX3CQ5U5Q3 659 aaKnown RBP10.49□□□□□ -0.73
SIN3A-207ENST00000566640 RPGRIP1LQ68CZ1 1315 aa10.49□□□□□ -0.73
SIN3A-207ENST00000566640 PNPLA6Q8IY17 1366 aa10.49□□□□□ -0.73
SIN3A-207ENST00000566640 C1orf167Q5SNV9 1468 aa10.49□□□□□ -0.73
SIN3A-207ENST00000566640 NHSL1Q5SYE7 1610 aa10.48□□□□□ -0.73
SIN3A-207ENST00000566640 DDX17Q92841 729 aaKnown RBP10.48□□□□□ -0.73
SIN3A-207ENST00000566640 LRRC59Q96AG4 307 aaKnown RBP10.48□□□□□ -0.73
SIN3A-207ENST00000566640 TRIM52Q96A61 297 aa10.47□□□□□ -0.73
SIN3A-207ENST00000566640 CDK12Q9NYV4 1490 aaPredicted RBP10.47□□□□□ -0.73
SIN3A-207ENST00000566640 NALCNQ8IZF0 1738 aa10.47□□□□□ -0.73
SIN3A-207ENST00000566640 NUTM2BA6NNL0 878 aaPredicted RBP10.46□□□□□ -0.73
SIN3A-207ENST00000566640 NUTM2EB1AL46 878 aaPredicted RBP10.46□□□□□ -0.73
SIN3A-207ENST00000566640 NUTM2AQ8IVF1 878 aaPredicted RBP10.46□□□□□ -0.73
SIN3A-207ENST00000566640 UPF1Q92900 1129 aaKnown RBP eCLIP10.46□□□□□ -0.73
SIN3A-207ENST00000566640 SOS2Q07890 1332 aaPredicted RBP10.46□□□□□ -0.73
SIN3A-207ENST00000566640 SETD1AO15047 1707 aaKnown RBP10.46□□□□□ -0.74
SIN3A-207ENST00000566640 LAMC1P11047 1609 aa10.45□□□□□ -0.74
SIN3A-207ENST00000566640 AFF2P51816 1311 aa10.45□□□□□ -0.74
SIN3A-207ENST00000566640 C7P10643 843 aa10.45□□□□□ -0.74
SIN3A-207ENST00000566640 RXRBP28702 533 aa10.45□□□□□ -0.74
SIN3A-207ENST00000566640 ASTLQ6HA08 431 aaPredicted RBP10.45□□□□□ -0.74
SIN3A-207ENST00000566640 CDAN1Q8IWY9 1227 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms