RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 SMG6Q86US8 1419 aaKnown RBP14.54□□□□□ -0.08
PDXDC1-214ENST00000566633 EVC2Q86UK5 1308 aa14.54□□□□□ -0.08
PDXDC1-214ENST00000566633 PARD3Q8TEW0 1356 aa14.54□□□□□ -0.08
PDXDC1-214ENST00000566633 SLC24A1O60721 1099 aa14.53□□□□□ -0.08
PDXDC1-214ENST00000566633 SBNO2Q9Y2G9 1366 aa14.53□□□□□ -0.08
PDXDC1-214ENST00000566633 ADAMTS13Q76LX8 1427 aa14.51□□□□□ -0.09
PDXDC1-214ENST00000566633 NLRP13Q86W25 1043 aa14.51□□□□□ -0.09
PDXDC1-214ENST00000566633 CDK19Q9BWU1 502 aa14.51□□□□□ -0.09
PDXDC1-214ENST00000566633 PPP4R2Q9NY27 417 aa14.51□□□□□ -0.09
PDXDC1-214ENST00000566633 QRICH2Q9H0J4 1663 aa14.51□□□□□ -0.09
PDXDC1-214ENST00000566633 NRXN3Q9Y4C0 1643 aa14.51□□□□□ -0.09
PDXDC1-214ENST00000566633 ARHGEF28Q8N1W1 1705 aaKnown RBP14.5□□□□□ -0.09
PDXDC1-214ENST00000566633 AMER1Q5JTC6 1135 aaPredicted RBP14.5□□□□□ -0.09
PDXDC1-214ENST00000566633 NUDCQ9Y266 331 aa14.5□□□□□ -0.09
PDXDC1-214ENST00000566633 MYO3AQ8NEV4 1616 aa14.5□□□□□ -0.09
PDXDC1-214ENST00000566633 PLEKHG1Q9ULL1 1385 aa14.49□□□□□ -0.09
PDXDC1-214ENST00000566633 ADAMTSL3P82987 1691 aa14.49□□□□□ -0.09
PDXDC1-214ENST00000566633 ABCC11Q96J66 1382 aa14.49□□□□□ -0.09
PDXDC1-214ENST00000566633 TULP4Q9NRJ4 1543 aa14.49□□□□□ -0.09
PDXDC1-214ENST00000566633 NUTM2FA1L443 756 aa14.48□□□□□ -0.09
PDXDC1-214ENST00000566633 AMOTL2Q9Y2J4 779 aa14.48□□□□□ -0.09
PDXDC1-214ENST00000566633 NCKAP5LQ9HCH0 1330 aa14.47□□□□□ -0.09
PDXDC1-214ENST00000566633 KDM5AP29375 1690 aaKnown RBP14.47□□□□□ -0.09
PDXDC1-214ENST00000566633 ROBO2Q9HCK4 1378 aa14.47□□□□□ -0.09
PDXDC1-214ENST00000566633 RBM33Q96EV2 1170 aaKnown RBP14.46□□□□□ -0.09
PDXDC1-214ENST00000566633 ARHGAP23Q9P227 1491 aa14.46□□□□□ -0.09
PDXDC1-214ENST00000566633 RNF123Q5XPI4 1314 aa14.46□□□□□ -0.09
PDXDC1-214ENST00000566633 TNNT2P45379 298 aaPredicted RBP14.46□□□□□ -0.09
PDXDC1-214ENST00000566633 ANKLE2Q86XL3 938 aa14.46□□□□□ -0.09
PDXDC1-214ENST00000566633 CABP1Q9NZU7 370 aa14.46□□□□□ -0.09
PDXDC1-214ENST00000566633 CEP170BQ9Y4F5 1589 aaPredicted RBP14.45□□□□□ -0.1
PDXDC1-214ENST00000566633 SLIT1O75093 1534 aa14.45□□□□□ -0.1
PDXDC1-214ENST00000566633 PTPRUQ92729 1446 aa14.45□□□□□ -0.1
PDXDC1-214ENST00000566633 MYOM1P52179 1685 aa14.45□□□□□ -0.1
PDXDC1-214ENST00000566633 SETD1AO15047 1707 aaKnown RBP14.45□□□□□ -0.1
PDXDC1-214ENST00000566633 TBX22Q9Y458 520 aa14.44□□□□□ -0.1
PDXDC1-214ENST00000566633 RBM19Q9Y4C8 960 aaKnown RBP14.44□□□□□ -0.1
PDXDC1-214ENST00000566633 NSD3Q9BZ95 1437 aa14.43□□□□□ -0.1
PDXDC1-214ENST00000566633 WASLO00401 505 aaPredicted RBP14.43□□□□□ -0.1
PDXDC1-214ENST00000566633 KCNA6P17658 529 aa14.42□□□□□ -0.1
PDXDC1-214ENST00000566633 PPP2R1AP30153 589 aa14.42□□□□□ -0.1
PDXDC1-214ENST00000566633 MED14O60244 1454 aa14.41□□□□□ -0.1
PDXDC1-214ENST00000566633 KDM4FA0A1W2PPD8 638 aa14.4□□□□□ -0.1
PDXDC1-214ENST00000566633 PUS7Q96PZ0 661 aaKnown RBP14.4□□□□□ -0.1
PDXDC1-214ENST00000566633 A0A1W2PP64 1363 aa14.4□□□□□ -0.1
PDXDC1-214ENST00000566633 HSPA2P54652 639 aa14.4□□□□□ -0.1
PDXDC1-214ENST00000566633 B4GALNT3Q6L9W6 998 aa14.4□□□□□ -0.1
PDXDC1-214ENST00000566633 INSRP06213 1382 aa14.4□□□□□ -0.1
PDXDC1-214ENST00000566633 DLC1Q96QB1 1528 aa14.39□□□□□ -0.11
PDXDC1-214ENST00000566633 NUDT16Q96DE0 195 aaKnown RBP14.39□□□□□ -0.11
PDXDC1-214ENST00000566633 ATAD2Q6PL18 1390 aa14.38□□□□□ -0.11
PDXDC1-214ENST00000566633 ANKRD36BQ8N2N9 1353 aa14.38□□□□□ -0.11
PDXDC1-214ENST00000566633 GGNBP2Q9H3C7 697 aa14.38□□□□□ -0.11
PDXDC1-214ENST00000566633 SALL2Q9Y467 1007 aaPredicted RBP14.38□□□□□ -0.11
PDXDC1-214ENST00000566633 TECPR2O15040 1411 aa14.38□□□□□ -0.11
PDXDC1-214ENST00000566633 MORC1Q86VD1 984 aa14.38□□□□□ -0.11
PDXDC1-214ENST00000566633 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.38□□□□□ -0.11
PDXDC1-214ENST00000566633 SIRT1Q96EB6 747 aa14.38□□□□□ -0.11
PDXDC1-214ENST00000566633 FAM135BQ49AJ0 1406 aa14.37□□□□□ -0.11
PDXDC1-214ENST00000566633 PDE3BQ13370 1112 aa14.37□□□□□ -0.11
PDXDC1-214ENST00000566633 PRR36Q9H6K5 1346 aa14.37□□□□□ -0.11
PDXDC1-214ENST00000566633 TERF2IPQ9NYB0 399 aa14.36□□□□□ -0.11
PDXDC1-214ENST00000566633 CGNL1Q0VF96 1302 aa14.36□□□□□ -0.11
PDXDC1-214ENST00000566633 SETD1BQ9UPS6 1966 aaKnown RBP14.36□□□□□ -0.11
PDXDC1-214ENST00000566633 HDGFL2Q7Z4V5 671 aaPredicted RBP14.35□□□□□ -0.11
PDXDC1-214ENST00000566633 BLMP54132 1417 aaPredicted RBP14.35□□□□□ -0.11
PDXDC1-214ENST00000566633 CCDC61Q9Y6R9 512 aa14.35□□□□□ -0.11
PDXDC1-214ENST00000566633 CD163L1Q9NR16 1453 aa14.35□□□□□ -0.11
PDXDC1-214ENST00000566633 FBLN1P23142 703 aa14.34□□□□□ -0.11
PDXDC1-214ENST00000566633 FYB1O15117 783 aa14.34□□□□□ -0.11
PDXDC1-214ENST00000566633 NPC1L1Q9UHC9 1359 aa14.33□□□□□ -0.11
PDXDC1-214ENST00000566633 PPIP5K1Q6PFW1 1433 aa14.33□□□□□ -0.12
PDXDC1-214ENST00000566633 CPS1P31327 1500 aa14.33□□□□□ -0.12
PDXDC1-214ENST00000566633 PMFBP1Q8TBY8 1022 aa14.33□□□□□ -0.12
PDXDC1-214ENST00000566633 ADAMTS8Q9UP79 889 aa14.32□□□□□ -0.12
PDXDC1-214ENST00000566633 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.32□□□□□ -0.12
PDXDC1-214ENST00000566633 ZRANB1Q9UGI0 708 aa14.31□□□□□ -0.12
PDXDC1-214ENST00000566633 NPHP4O75161 1426 aaPredicted RBP14.31□□□□□ -0.12
PDXDC1-214ENST00000566633 NINLQ9Y2I6 1382 aa14.31□□□□□ -0.12
PDXDC1-214ENST00000566633 MTHFSP49914 203 aa14.3□□□□□ -0.12
PDXDC1-214ENST00000566633 RCAN3Q9UKA8 241 aa14.3□□□□□ -0.12
PDXDC1-214ENST00000566633 CDCA7LQ96GN5 454 aa14.3□□□□□ -0.12
PDXDC1-214ENST00000566633 RRP1P56182 461 aaKnown RBP14.29□□□□□ -0.12
PDXDC1-214ENST00000566633 ZNF142P52746 1687 aaPredicted RBP14.29□□□□□ -0.12
PDXDC1-214ENST00000566633 NME9Q86XW9 330 aa14.29□□□□□ -0.12
PDXDC1-214ENST00000566633 C14orf37Q86TY3 774 aa14.29□□□□□ -0.12
PDXDC1-214ENST00000566633 CCDC136Q96JN2 1154 aa14.29□□□□□ -0.12
PDXDC1-214ENST00000566633 KNDC1Q76NI1 1749 aa14.28□□□□□ -0.12
PDXDC1-214ENST00000566633 WDR43Q15061 677 aaKnown RBP eCLIP14.28□□□□□ -0.12
PDXDC1-214ENST00000566633 ACEP12821 1306 aa14.28□□□□□ -0.12
PDXDC1-214ENST00000566633 CCDC146Q8IYE0 955 aa14.28□□□□□ -0.12
PDXDC1-214ENST00000566633 PTCH1Q13635 1447 aa14.27□□□□□ -0.12
PDXDC1-214ENST00000566633 ATP7BP35670 1465 aa14.27□□□□□ -0.12
PDXDC1-214ENST00000566633 PIK3R4Q99570 1358 aa14.26□□□□□ -0.13
PDXDC1-214ENST00000566633 PPM1GO15355 546 aaPredicted RBP14.26□□□□□ -0.13
PDXDC1-214ENST00000566633 DIP2AQ14689 1571 aa14.25□□□□□ -0.13
PDXDC1-214ENST00000566633 CPSF1Q10570 1443 aaKnown RBP14.25□□□□□ -0.13
PDXDC1-214ENST00000566633 FANCIQ9NVI1 1328 aa14.25□□□□□ -0.13
PDXDC1-214ENST00000566633 NGDNQ8NEJ9 315 aaKnown RBP14.25□□□□□ -0.13
PDXDC1-214ENST00000566633 SOX12O15370 315 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms