RNA–Protein interactions for RNA: ENST00000566613.1

GDPD3-205, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 5

Gene GDPD3, Length 235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-205ENST00000566613 LRRC9Q6ZRR7 1453 aa7.19□□□□□ -1.26
GDPD3-205ENST00000566613 GRXCR2A6NFK2 248 aa7.19□□□□□ -1.26
GDPD3-205ENST00000566613 XRCC6P12956 609 aaKnown RBP eCLIP7.19□□□□□ -1.26
GDPD3-205ENST00000566613 BECN1Q14457 450 aa7.19□□□□□ -1.26
GDPD3-205ENST00000566613 FAM161AQ3B820 660 aa7.19□□□□□ -1.26
GDPD3-205ENST00000566613 KIAA1211Q6ZU35 1233 aa7.19□□□□□ -1.26
GDPD3-205ENST00000566613 FTSJ3Q8IY81 847 aaKnown RBP7.19□□□□□ -1.26
GDPD3-205ENST00000566613 NLRP1Q9C000 1473 aa7.18□□□□□ -1.26
GDPD3-205ENST00000566613 OFD1O75665 1012 aa7.18□□□□□ -1.26
GDPD3-205ENST00000566613 TTLL12Q14166 644 aaPredicted RBP7.18□□□□□ -1.26
GDPD3-205ENST00000566613 PDCD7Q8N8D1 485 aaKnown RBP7.18□□□□□ -1.26
GDPD3-205ENST00000566613 TRIM44Q96DX7 344 aaPredicted RBP7.18□□□□□ -1.26
GDPD3-205ENST00000566613 PCMTD1Q96MG8 357 aaPredicted RBP7.18□□□□□ -1.26
GDPD3-205ENST00000566613 LRPPRCP42704 1394 aaKnown RBP7.18□□□□□ -1.26
GDPD3-205ENST00000566613 HFM1A2PYH4 1435 aa7.18□□□□□ -1.26
GDPD3-205ENST00000566613 MIA2Q96PC5 1412 aa7.18□□□□□ -1.26
GDPD3-205ENST00000566613 ARHGAP35Q9NRY4 1499 aa7.17□□□□□ -1.26
GDPD3-205ENST00000566613 DYNC1I1O14576 645 aa7.17□□□□□ -1.26
GDPD3-205ENST00000566613 TRAK2O60296 914 aa7.17□□□□□ -1.26
GDPD3-205ENST00000566613 SLC20A2Q08357 652 aa7.17□□□□□ -1.26
GDPD3-205ENST00000566613 PTGDRQ13258 359 aa7.17□□□□□ -1.26
GDPD3-205ENST00000566613 SH3D19Q5HYK7 790 aa7.17□□□□□ -1.26
GDPD3-205ENST00000566613 PPP4R3BQ5MIZ7 849 aa7.17□□□□□ -1.26
GDPD3-205ENST00000566613 OXER1Q8TDS5 423 aa7.17□□□□□ -1.26
GDPD3-205ENST00000566613 MYH16Q9H6N6 1097 aa7.17□□□□□ -1.26
GDPD3-205ENST00000566613 KIF14Q15058 1648 aa7.16□□□□□ -1.26
GDPD3-205ENST00000566613 C2orf72A6NCS6 295 aa7.16□□□□□ -1.26
GDPD3-205ENST00000566613 RIPK4P57078 832 aa7.16□□□□□ -1.26
GDPD3-205ENST00000566613 LCE2DQ5TA82 110 aaPredicted RBP7.16□□□□□ -1.26
GDPD3-205ENST00000566613 GIGYF2Q6Y7W6 1299 aaKnown RBP7.16□□□□□ -1.26
GDPD3-205ENST00000566613 ARID3AQ99856 593 aa7.16□□□□□ -1.26
GDPD3-205ENST00000566613 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.16□□□□□ -1.26
GDPD3-205ENST00000566613 CFAP65Q6ZU64 1925 aaKnown RBP7.16□□□□□ -1.26
GDPD3-205ENST00000566613 ERBB4Q15303 1308 aa7.16□□□□□ -1.26
GDPD3-205ENST00000566613 CUX1P39880 1505 aa7.16□□□□□ -1.26
GDPD3-205ENST00000566613 THOC2Q8NI27 1593 aaKnown RBP7.16□□□□□ -1.26
GDPD3-205ENST00000566613 PTMSP20962 102 aa7.15□□□□□ -1.26
GDPD3-205ENST00000566613 PDE3BQ13370 1112 aa7.15□□□□□ -1.26
GDPD3-205ENST00000566613 DPY19L2Q6NUT2 758 aa7.15□□□□□ -1.26
GDPD3-205ENST00000566613 CENPQQ7L2Z9 268 aaPredicted RBP7.15□□□□□ -1.26
GDPD3-205ENST00000566613 FAM9BQ8IZU0 186 aa7.15□□□□□ -1.26
GDPD3-205ENST00000566613 CCDC94Q9BW85 323 aaPredicted RBP7.15□□□□□ -1.26
GDPD3-205ENST00000566613 TMEM51Q9NW97 253 aa7.15□□□□□ -1.26
GDPD3-205ENST00000566613 BOLA1Q9Y3E2 137 aa7.15□□□□□ -1.26
GDPD3-205ENST00000566613 KDM2BQ8NHM5 1336 aa7.15□□□□□ -1.26
GDPD3-205ENST00000566613 IBTKQ9P2D0 1353 aaPredicted RBP7.15□□□□□ -1.26
GDPD3-205ENST00000566613 PCF11O94913 1555 aaKnown RBP7.15□□□□□ -1.27
GDPD3-205ENST00000566613 DDX11L8A8MPP1 907 aa7.14□□□□□ -1.27
GDPD3-205ENST00000566613 FECHP22830 423 aa7.14□□□□□ -1.27
GDPD3-205ENST00000566613 CCDC173Q0VFZ6 552 aa7.14□□□□□ -1.27
GDPD3-205ENST00000566613 SHROOM2Q13796 1616 aa7.14□□□□□ -1.27
GDPD3-205ENST00000566613 MCM6Q14566 821 aa7.14□□□□□ -1.27
GDPD3-205ENST00000566613 C8orf34Q49A92 452 aa7.14□□□□□ -1.27
GDPD3-205ENST00000566613 HS1BP3Q53T59 392 aa7.14□□□□□ -1.27
GDPD3-205ENST00000566613 KANK4Q5T7N3 995 aaPredicted RBP7.14□□□□□ -1.27
GDPD3-205ENST00000566613 ZSCAN30Q86W11 494 aa7.14□□□□□ -1.27
GDPD3-205ENST00000566613 TMUB1Q9BVT8 246 aa7.14□□□□□ -1.27
GDPD3-205ENST00000566613 GRPEL1Q9HAV7 217 aa7.14□□□□□ -1.27
GDPD3-205ENST00000566613 EIF3AQ14152 1382 aaKnown RBP7.13□□□□□ -1.27
GDPD3-205ENST00000566613 DHX29Q7Z478 1369 aaKnown RBP7.13□□□□□ -1.27
GDPD3-205ENST00000566613 ARID3CA6NKF2 412 aa7.13□□□□□ -1.27
GDPD3-205ENST00000566613 TBC1D12O60347 775 aa7.13□□□□□ -1.27
GDPD3-205ENST00000566613 ZSCAN20P17040 1043 aaPredicted RBP7.13□□□□□ -1.27
GDPD3-205ENST00000566613 CDK11BP21127 795 aaKnown RBP7.13□□□□□ -1.27
GDPD3-205ENST00000566613 EIF4G2P78344 907 aaKnown RBP eCLIP7.13□□□□□ -1.27
GDPD3-205ENST00000566613 CCDC184Q52MB2 194 aa7.13□□□□□ -1.27
GDPD3-205ENST00000566613 C3orf67Q6ZVT6 689 aa7.13□□□□□ -1.27
GDPD3-205ENST00000566613 EXOC6Q8TAG9 804 aa7.13□□□□□ -1.27
GDPD3-205ENST00000566613 L3MBTL3Q96JM7 780 aaPredicted RBP7.13□□□□□ -1.27
GDPD3-205ENST00000566613 ZHX1Q9UKY1 873 aaPredicted RBP7.13□□□□□ -1.27
GDPD3-205ENST00000566613 CLASP1Q7Z460 1538 aa7.12□□□□□ -1.27
GDPD3-205ENST00000566613 KIAA1107Q9UPP5 1409 aa7.12□□□□□ -1.27
GDPD3-205ENST00000566613 BRD4O60885 1362 aaPredicted RBP7.12□□□□□ -1.27
GDPD3-205ENST00000566613 ZBTB7CA1YPR0 619 aa7.12□□□□□ -1.27
GDPD3-205ENST00000566613 HSPA5P11021 654 aaKnown RBP7.12□□□□□ -1.27
GDPD3-205ENST00000566613 CSPP1Q1MSJ5 1256 aa7.12□□□□□ -1.27
GDPD3-205ENST00000566613 PPP1R9BQ96SB3 815 aa7.12□□□□□ -1.27
GDPD3-205ENST00000566613 PANK2Q9BZ23 570 aa7.12□□□□□ -1.27
GDPD3-205ENST00000566613 BCCIPQ9P287 314 aaKnown RBP eCLIP7.12□□□□□ -1.27
GDPD3-205ENST00000566613 TEX14Q8IWB6 1497 aa7.11□□□□□ -1.27
GDPD3-205ENST00000566613 FYCO1Q9BQS8 1478 aa7.11□□□□□ -1.27
GDPD3-205ENST00000566613 FMN1Q68DA7 1419 aa7.11□□□□□ -1.27
GDPD3-205ENST00000566613 SPATA31E1Q6ZUB1 1445 aa7.11□□□□□ -1.27
GDPD3-205ENST00000566613 NINLQ9Y2I6 1382 aa7.11□□□□□ -1.27
GDPD3-205ENST00000566613 G3V3G9 751 aa7.11□□□□□ -1.27
GDPD3-205ENST00000566613 SNPHO15079 494 aa7.11□□□□□ -1.27
GDPD3-205ENST00000566613 CCDC82Q8N4S0 544 aa7.11□□□□□ -1.27
GDPD3-205ENST00000566613 ANTXR1Q9H6X2 564 aa7.11□□□□□ -1.27
GDPD3-205ENST00000566613 RCAN3Q9UKA8 241 aa7.11□□□□□ -1.27
GDPD3-205ENST00000566613 KIF21AQ7Z4S6 1674 aa7.1□□□□□ -1.27
GDPD3-205ENST00000566613 UQCRHLA0A096LP55 91 aa7.1□□□□□ -1.27
GDPD3-205ENST00000566613 ZNF500O60304 480 aaPredicted RBP7.1□□□□□ -1.27
GDPD3-205ENST00000566613 UQCRHP07919 91 aa7.1□□□□□ -1.27
GDPD3-205ENST00000566613 MSNP26038 577 aaKnown RBP7.1□□□□□ -1.27
GDPD3-205ENST00000566613 MCM4P33991 863 aa7.1□□□□□ -1.27
GDPD3-205ENST00000566613 SKIV2LQ15477 1246 aaKnown RBP7.1□□□□□ -1.27
GDPD3-205ENST00000566613 DDX12PQ92771 950 aa7.1□□□□□ -1.27
GDPD3-205ENST00000566613 HIRIP3Q9BW71 556 aaPredicted RBP7.1□□□□□ -1.27
GDPD3-205ENST00000566613 GPCPD1Q9NPB8 672 aa7.1□□□□□ -1.27
GDPD3-205ENST00000566613 KDM5CP41229 1560 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms