RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 CCDC9Q9Y3X0 531 aaKnown RBP14.71□□□□□ -0.05
SMPD3-206ENST00000566009 KANK1Q14678 1352 aa14.71□□□□□ -0.06
SMPD3-206ENST00000566009 RGPD1P0DJD0 1748 aa14.7□□□□□ -0.06
SMPD3-206ENST00000566009 A0A0G2JS52 829 aa14.7□□□□□ -0.06
SMPD3-206ENST00000566009 MYT1Q01538 1121 aa14.7□□□□□ -0.06
SMPD3-206ENST00000566009 RPRD2Q5VT52 1461 aaKnown RBP14.69□□□□□ -0.06
SMPD3-206ENST00000566009 MYO5BQ9ULV0 1848 aa14.69□□□□□ -0.06
SMPD3-206ENST00000566009 SLC34A2O95436 690 aa14.69□□□□□ -0.06
SMPD3-206ENST00000566009 FAM182BQ5T319 152 aa14.69□□□□□ -0.06
SMPD3-206ENST00000566009 LMTK2Q8IWU2 1503 aa14.67□□□□□ -0.06
SMPD3-206ENST00000566009 NBPF8Q3BBV2 869 aa14.67□□□□□ -0.06
SMPD3-206ENST00000566009 NBPF14Q5TI25 921 aa14.67□□□□□ -0.06
SMPD3-206ENST00000566009 CHGAP10645 457 aaKnown RBP14.66□□□□□ -0.06
SMPD3-206ENST00000566009 CHD4Q14839 1912 aa14.65□□□□□ -0.06
SMPD3-206ENST00000566009 XRN1Q8IZH2 1706 aaKnown RBP14.65□□□□□ -0.06
SMPD3-206ENST00000566009 TMEM131LA2VDJ0 1609 aa14.65□□□□□ -0.06
SMPD3-206ENST00000566009 UTRNP46939 3433 aa14.65□□□□□ -0.06
SMPD3-206ENST00000566009 ERBINQ96RT1 1412 aa14.64□□□□□ -0.07
SMPD3-206ENST00000566009 PARD3Q8TEW0 1356 aa14.63□□□□□ -0.07
SMPD3-206ENST00000566009 GCC2Q8IWJ2 1684 aa14.63□□□□□ -0.07
SMPD3-206ENST00000566009 FAM98CQ17RN3 349 aaKnown RBP14.63□□□□□ -0.07
SMPD3-206ENST00000566009 RRP7BPQ9NSQ0 103 aa14.63□□□□□ -0.07
SMPD3-206ENST00000566009 TNS1Q9HBL0 1735 aaKnown RBP14.63□□□□□ -0.07
SMPD3-206ENST00000566009 NPHP3Q7Z494 1330 aa14.63□□□□□ -0.07
SMPD3-206ENST00000566009 KIF15Q9NS87 1388 aa14.62□□□□□ -0.07
SMPD3-206ENST00000566009 CAPN15O75808 1086 aa14.62□□□□□ -0.07
SMPD3-206ENST00000566009 APBA3O96018 575 aa14.62□□□□□ -0.07
SMPD3-206ENST00000566009 XPCQ01831 940 aaPredicted RBP14.62□□□□□ -0.07
SMPD3-206ENST00000566009 NALCNQ8IZF0 1738 aa14.62□□□□□ -0.07
SMPD3-206ENST00000566009 TRIM37O94972 964 aa14.61□□□□□ -0.07
SMPD3-206ENST00000566009 PXDNQ92626 1479 aa14.59□□□□□ -0.07
SMPD3-206ENST00000566009 FOXO3O43524 673 aa14.59□□□□□ -0.07
SMPD3-206ENST00000566009 METP08581 1390 aa14.59□□□□□ -0.07
SMPD3-206ENST00000566009 ESCO1Q5FWF5 840 aa14.57□□□□□ -0.08
SMPD3-206ENST00000566009 SYT17Q9BSW7 474 aa14.57□□□□□ -0.08
SMPD3-206ENST00000566009 ADGRB2O60241 1585 aa14.56□□□□□ -0.08
SMPD3-206ENST00000566009 FAM83GA6ND36 823 aa14.55□□□□□ -0.08
SMPD3-206ENST00000566009 HSPA6P17066 643 aa14.55□□□□□ -0.08
SMPD3-206ENST00000566009 ADGRL2O95490 1459 aa14.55□□□□□ -0.08
SMPD3-206ENST00000566009 USP32Q8NFA0 1604 aa14.55□□□□□ -0.08
SMPD3-206ENST00000566009 PTPN23Q9H3S7 1636 aa14.55□□□□□ -0.08
SMPD3-206ENST00000566009 HAP1P54257 671 aaPredicted RBP14.54□□□□□ -0.08
SMPD3-206ENST00000566009 FAM196AQ6ZSG2 479 aa14.54□□□□□ -0.08
SMPD3-206ENST00000566009 PCDH10Q9P2E7 1040 aa14.54□□□□□ -0.08
SMPD3-206ENST00000566009 NRKQ7Z2Y5 1582 aa14.54□□□□□ -0.08
SMPD3-206ENST00000566009 RREB1Q92766 1687 aa14.54□□□□□ -0.08
SMPD3-206ENST00000566009 NUP188Q5SRE5 1749 aa14.54□□□□□ -0.08
SMPD3-206ENST00000566009 SPATA31A3Q5VYP0 1347 aa14.53□□□□□ -0.08
SMPD3-206ENST00000566009 FHDC1Q9C0D6 1143 aaPredicted RBP14.53□□□□□ -0.08
SMPD3-206ENST00000566009 NWD2Q9ULI1 1742 aa14.52□□□□□ -0.08
SMPD3-206ENST00000566009 NRXN3Q9Y4C0 1643 aa14.52□□□□□ -0.08
SMPD3-206ENST00000566009 PTGER2P43116 358 aa14.52□□□□□ -0.09
SMPD3-206ENST00000566009 PRELPP51888 382 aa14.52□□□□□ -0.09
SMPD3-206ENST00000566009 CABLES1Q8TDN4 633 aa14.51□□□□□ -0.09
SMPD3-206ENST00000566009 LRPPRCP42704 1394 aaKnown RBP14.5□□□□□ -0.09
SMPD3-206ENST00000566009 PLCH1Q4KWH8 1693 aa14.5□□□□□ -0.09
SMPD3-206ENST00000566009 ZBTB7AO95365 584 aa14.49□□□□□ -0.09
SMPD3-206ENST00000566009 COL13A1Q5TAT6 717 aaPredicted RBP14.49□□□□□ -0.09
SMPD3-206ENST00000566009 MYOM1P52179 1685 aa14.49□□□□□ -0.09
SMPD3-206ENST00000566009 PLEKHG5O94827 1062 aa14.48□□□□□ -0.09
SMPD3-206ENST00000566009 PDGFDQ9GZP0 370 aaPredicted RBP14.48□□□□□ -0.09
SMPD3-206ENST00000566009 MYOM3Q5VTT5 1437 aa14.48□□□□□ -0.09
SMPD3-206ENST00000566009 ATF5Q9Y2D1 282 aaPredicted RBP14.47□□□□□ -0.09
SMPD3-206ENST00000566009 SPATA31A5Q5VU36 1347 aa14.45□□□□□ -0.1
SMPD3-206ENST00000566009 SPATA31A7Q8IWB4 1347 aa14.45□□□□□ -0.1
SMPD3-206ENST00000566009 GPR162Q16538 588 aa14.45□□□□□ -0.1
SMPD3-206ENST00000566009 SHANK3Q9BYB0 1731 aa14.45□□□□□ -0.1
SMPD3-206ENST00000566009 BTG4Q9NY30 223 aa14.45□□□□□ -0.1
SMPD3-206ENST00000566009 ROBO2Q9HCK4 1378 aa14.45□□□□□ -0.1
SMPD3-206ENST00000566009 ABCC5O15440 1437 aa14.43□□□□□ -0.1
SMPD3-206ENST00000566009 CASZ1Q86V15 1759 aa14.43□□□□□ -0.1
SMPD3-206ENST00000566009 KRT28Q7Z3Y7 464 aa14.43□□□□□ -0.1
SMPD3-206ENST00000566009 TNS4Q8IZW8 715 aa14.43□□□□□ -0.1
SMPD3-206ENST00000566009 THSD7AQ9UPZ6 1657 aa14.42□□□□□ -0.1
SMPD3-206ENST00000566009 DLC1Q96QB1 1528 aa14.42□□□□□ -0.1
SMPD3-206ENST00000566009 ANO8Q9HCE9 1232 aaPredicted RBP14.42□□□□□ -0.1
SMPD3-206ENST00000566009 NUTM2FA1L443 756 aa14.41□□□□□ -0.1
SMPD3-206ENST00000566009 NRAPQ86VF7 1730 aa14.41□□□□□ -0.1
SMPD3-206ENST00000566009 DNAJC5GQ8N7S2 189 aa14.38□□□□□ -0.11
SMPD3-206ENST00000566009 SGIP1Q9BQI5 828 aa14.38□□□□□ -0.11
SMPD3-206ENST00000566009 CHIC2Q9UKJ5 165 aa14.37□□□□□ -0.11
SMPD3-206ENST00000566009 CCDC144AA2RUR9 1427 aa14.37□□□□□ -0.11
SMPD3-206ENST00000566009 NEXMIFQ5QGS0 1516 aa14.36□□□□□ -0.11
SMPD3-206ENST00000566009 ANKRD30AQ9BXX3 1397 aa14.36□□□□□ -0.11
SMPD3-206ENST00000566009 HFM1A2PYH4 1435 aa14.36□□□□□ -0.11
SMPD3-206ENST00000566009 TNS3Q68CZ2 1445 aa14.36□□□□□ -0.11
SMPD3-206ENST00000566009 PDE3BQ13370 1112 aa14.36□□□□□ -0.11
SMPD3-206ENST00000566009 ZNF326Q5BKZ1 582 aaKnown RBP14.36□□□□□ -0.11
SMPD3-206ENST00000566009 LMOD2Q6P5Q4 547 aa14.36□□□□□ -0.11
SMPD3-206ENST00000566009 ARXQ96QS3 562 aa14.36□□□□□ -0.11
SMPD3-206ENST00000566009 MTFR1LQ9H019 292 aa14.35□□□□□ -0.11
SMPD3-206ENST00000566009 GPBP1L1Q9HC44 474 aaPredicted RBP14.35□□□□□ -0.11
SMPD3-206ENST00000566009 MAP3K5Q99683 1374 aa14.34□□□□□ -0.11
SMPD3-206ENST00000566009 CROCC2H7BZ55 1655 aa14.34□□□□□ -0.11
SMPD3-206ENST00000566009 PSME1Q06323 249 aa14.34□□□□□ -0.11
SMPD3-206ENST00000566009 PELP1Q8IZL8 1130 aaKnown RBP14.34□□□□□ -0.11
SMPD3-206ENST00000566009 SPATA31A1Q5TZJ5 1347 aa14.34□□□□□ -0.11
SMPD3-206ENST00000566009 CDC42BPGQ6DT37 1551 aa14.34□□□□□ -0.11
SMPD3-206ENST00000566009 ATP10DQ9P241 1426 aa14.33□□□□□ -0.11
SMPD3-206ENST00000566009 APLP1P51693 650 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms