RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 EVC2Q86UK5 1308 aa12.88□□□□□ -0.35
CNEP1R1-206ENST00000565556 CCER2I3L3R5 266 aa12.88□□□□□ -0.35
CNEP1R1-206ENST00000565556 CPS1P31327 1500 aa12.87□□□□□ -0.35
CNEP1R1-206ENST00000565556 ANP32CO43423 234 aa12.87□□□□□ -0.35
CNEP1R1-206ENST00000565556 NPHP4O75161 1426 aaPredicted RBP12.86□□□□□ -0.35
CNEP1R1-206ENST00000565556 NEFLP07196 543 aa12.85□□□□□ -0.35
CNEP1R1-206ENST00000565556 SAFB2Q14151 953 aaKnown RBP eCLIP12.84□□□□□ -0.35
CNEP1R1-206ENST00000565556 ANP32EQ9BTT0 268 aa12.83□□□□□ -0.36
CNEP1R1-206ENST00000565556 AMOTL2Q9Y2J4 779 aa12.83□□□□□ -0.36
CNEP1R1-206ENST00000565556 PTPRUQ92729 1446 aa12.83□□□□□ -0.36
CNEP1R1-206ENST00000565556 TULP4Q9NRJ4 1543 aa12.83□□□□□ -0.36
CNEP1R1-206ENST00000565556 WAPLQ7Z5K2 1190 aa12.82□□□□□ -0.36
CNEP1R1-206ENST00000565556 MINK1Q8N4C8 1332 aaPredicted RBP12.82□□□□□ -0.36
CNEP1R1-206ENST00000565556 NCKAP5LQ9HCH0 1330 aa12.82□□□□□ -0.36
CNEP1R1-206ENST00000565556 PTCH1Q13635 1447 aa12.82□□□□□ -0.36
CNEP1R1-206ENST00000565556 MYOM1P52179 1685 aa12.82□□□□□ -0.36
CNEP1R1-206ENST00000565556 XRN1Q8IZH2 1706 aaKnown RBP12.82□□□□□ -0.36
CNEP1R1-206ENST00000565556 CHD2O14647 1828 aaKnown RBP12.82□□□□□ -0.36
CNEP1R1-206ENST00000565556 FKBP8Q14318 412 aa12.82□□□□□ -0.36
CNEP1R1-206ENST00000565556 LMTK3Q96Q04 1460 aa12.81□□□□□ -0.36
CNEP1R1-206ENST00000565556 ROBO2Q9HCK4 1378 aa12.81□□□□□ -0.36
CNEP1R1-206ENST00000565556 PLEKHH1Q9ULM0 1364 aa12.81□□□□□ -0.36
CNEP1R1-206ENST00000565556 NINLQ9Y2I6 1382 aa12.8□□□□□ -0.36
CNEP1R1-206ENST00000565556 PANK3Q9H999 370 aa12.8□□□□□ -0.36
CNEP1R1-206ENST00000565556 ATAD2Q6PL18 1390 aa12.8□□□□□ -0.36
CNEP1R1-206ENST00000565556 SRPK2P78362 688 aaKnown RBP12.79□□□□□ -0.36
CNEP1R1-206ENST00000565556 CDK19Q9BWU1 502 aa12.79□□□□□ -0.36
CNEP1R1-206ENST00000565556 ADGRB2O60241 1585 aa12.78□□□□□ -0.36
CNEP1R1-206ENST00000565556 KTN1Q86UP2 1357 aaKnown RBP12.78□□□□□ -0.36
CNEP1R1-206ENST00000565556 WASLO00401 505 aaPredicted RBP12.77□□□□□ -0.36
CNEP1R1-206ENST00000565556 PER1O15534 1290 aaPredicted RBP12.77□□□□□ -0.36
CNEP1R1-206ENST00000565556 CABP2Q9NPB3 220 aa12.77□□□□□ -0.36
CNEP1R1-206ENST00000565556 KCNA6P17658 529 aa12.76□□□□□ -0.37
CNEP1R1-206ENST00000565556 HSPA2P54652 639 aa12.76□□□□□ -0.37
CNEP1R1-206ENST00000565556 TMC1Q8TDI8 760 aa12.76□□□□□ -0.37
CNEP1R1-206ENST00000565556 PRKRIP1Q9H875 184 aaPredicted RBP12.76□□□□□ -0.37
CNEP1R1-206ENST00000565556 KNSTRNQ9Y448 316 aa12.76□□□□□ -0.37
CNEP1R1-206ENST00000565556 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.76□□□□□ -0.37
CNEP1R1-206ENST00000565556 NWD1Q149M9 1564 aa12.75□□□□□ -0.37
CNEP1R1-206ENST00000565556 RALBP1Q15311 655 aa12.74□□□□□ -0.37
CNEP1R1-206ENST00000565556 SLC12A5Q9H2X9 1139 aa12.74□□□□□ -0.37
CNEP1R1-206ENST00000565556 STRCQ7RTU9 1775 aa12.74□□□□□ -0.37
CNEP1R1-206ENST00000565556 TERF2IPQ9NYB0 399 aa12.74□□□□□ -0.37
CNEP1R1-206ENST00000565556 ANKRD36BQ8N2N9 1353 aa12.73□□□□□ -0.37
CNEP1R1-206ENST00000565556 NPC1L1Q9UHC9 1359 aa12.73□□□□□ -0.37
CNEP1R1-206ENST00000565556 NKTRP30414 1462 aaKnown RBP12.72□□□□□ -0.37
CNEP1R1-206ENST00000565556 NUDT16Q96DE0 195 aaKnown RBP12.71□□□□□ -0.37
CNEP1R1-206ENST00000565556 HDGFL2Q7Z4V5 671 aaPredicted RBP12.71□□□□□ -0.38
CNEP1R1-206ENST00000565556 CARD14Q9BXL6 1004 aa12.71□□□□□ -0.38
CNEP1R1-206ENST00000565556 CCDC61Q9Y6R9 512 aa12.71□□□□□ -0.38
CNEP1R1-206ENST00000565556 ATP7BP35670 1465 aa12.7□□□□□ -0.38
CNEP1R1-206ENST00000565556 USP32Q8NFA0 1604 aa12.7□□□□□ -0.38
CNEP1R1-206ENST00000565556 AMER1Q5JTC6 1135 aaPredicted RBP12.7□□□□□ -0.38
CNEP1R1-206ENST00000565556 CABP1Q9NZU7 370 aa12.7□□□□□ -0.38
CNEP1R1-206ENST00000565556 PARD3Q8TEW0 1356 aa12.69□□□□□ -0.38
CNEP1R1-206ENST00000565556 DMRT2Q9Y5R5 561 aa12.69□□□□□ -0.38
CNEP1R1-206ENST00000565556 ITSN1Q15811 1721 aa12.69□□□□□ -0.38
CNEP1R1-206ENST00000565556 CDC42BPGQ6DT37 1551 aa12.68□□□□□ -0.38
CNEP1R1-206ENST00000565556 PPIP5K1Q6PFW1 1433 aa12.68□□□□□ -0.38
CNEP1R1-206ENST00000565556 NSD3Q9BZ95 1437 aa12.68□□□□□ -0.38
CNEP1R1-206ENST00000565556 PROSER2Q86WR7 435 aaPredicted RBP12.68□□□□□ -0.38
CNEP1R1-206ENST00000565556 NALCNQ8IZF0 1738 aa12.68□□□□□ -0.38
CNEP1R1-206ENST00000565556 A0A1W2PP64 1363 aa12.68□□□□□ -0.38
CNEP1R1-206ENST00000565556 ANKARQ7Z5J8 1434 aa12.68□□□□□ -0.38
CNEP1R1-206ENST00000565556 ADGRL3Q9HAR2 1447 aa12.68□□□□□ -0.38
CNEP1R1-206ENST00000565556 CC2D1BQ5T0F9 858 aaKnown RBP12.68□□□□□ -0.38
CNEP1R1-206ENST00000565556 TOPAZ1Q8N9V7 1692 aa12.68□□□□□ -0.38
CNEP1R1-206ENST00000565556 FMN2Q9NZ56 1722 aa12.67□□□□□ -0.38
CNEP1R1-206ENST00000565556 CGNL1Q0VF96 1302 aa12.67□□□□□ -0.38
CNEP1R1-206ENST00000565556 MYBBP1AQ9BQG0 1328 aaKnown RBP12.67□□□□□ -0.38
CNEP1R1-206ENST00000565556 NCOA3Q9Y6Q9 1424 aa12.67□□□□□ -0.38
CNEP1R1-206ENST00000565556 CD163L1Q9NR16 1453 aa12.67□□□□□ -0.38
CNEP1R1-206ENST00000565556 CNGB1Q14028 1251 aaPredicted RBP12.67□□□□□ -0.38
CNEP1R1-206ENST00000565556 RBM19Q9Y4C8 960 aaKnown RBP12.67□□□□□ -0.38
CNEP1R1-206ENST00000565556 NSD2O96028 1365 aa12.67□□□□□ -0.38
CNEP1R1-206ENST00000565556 ZNF692Q9BU19 519 aaPredicted RBP12.66□□□□□ -0.38
CNEP1R1-206ENST00000565556 PRR36Q9H6K5 1346 aa12.66□□□□□ -0.38
CNEP1R1-206ENST00000565556 PLEKHG3A1L390 1219 aa12.65□□□□□ -0.38
CNEP1R1-206ENST00000565556 C14orf37Q86TY3 774 aa12.65□□□□□ -0.38
CNEP1R1-206ENST00000565556 STRCP1A6NGW2 1772 aa12.65□□□□□ -0.38
CNEP1R1-206ENST00000565556 AKAP12Q02952 1782 aa12.65□□□□□ -0.38
CNEP1R1-206ENST00000565556 CPSF1Q10570 1443 aaKnown RBP12.65□□□□□ -0.38
CNEP1R1-206ENST00000565556 NLRP13Q86W25 1043 aa12.64□□□□□ -0.39
CNEP1R1-206ENST00000565556 BRD4O60885 1362 aaPredicted RBP12.64□□□□□ -0.39
CNEP1R1-206ENST00000565556 C19orf44Q9H6X5 657 aa12.63□□□□□ -0.39
CNEP1R1-206ENST00000565556 MRS2Q9HD23 443 aa12.63□□□□□ -0.39
CNEP1R1-206ENST00000565556 EDC4Q6P2E9 1401 aaKnown RBP12.63□□□□□ -0.39
CNEP1R1-206ENST00000565556 MON2Q7Z3U7 1717 aa12.63□□□□□ -0.39
CNEP1R1-206ENST00000565556 RGPD8O14715 1765 aaPredicted RBP12.63□□□□□ -0.39
CNEP1R1-206ENST00000565556 NUTM2FA1L443 756 aa12.62□□□□□ -0.39
CNEP1R1-206ENST00000565556 POTEDQ86YR6 584 aa12.62□□□□□ -0.39
CNEP1R1-206ENST00000565556 MORC1Q86VD1 984 aa12.62□□□□□ -0.39
CNEP1R1-206ENST00000565556 KIF20BQ96Q89 1820 aa12.62□□□□□ -0.39
CNEP1R1-206ENST00000565556 ANKRD26Q9UPS8 1709 aa12.61□□□□□ -0.39
CNEP1R1-206ENST00000565556 DCCP43146 1447 aa12.61□□□□□ -0.39
CNEP1R1-206ENST00000565556 TMEM94Q12767 1356 aa12.61□□□□□ -0.39
CNEP1R1-206ENST00000565556 ACEP12821 1306 aa12.61□□□□□ -0.39
CNEP1R1-206ENST00000565556 HNRNPUQ00839 825 aaKnown RBP eCLIP12.61□□□□□ -0.39
CNEP1R1-206ENST00000565556 RBM33Q96EV2 1170 aaKnown RBP12.61□□□□□ -0.39
CNEP1R1-206ENST00000565556 POLR3AO14802 1390 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms