RNA–Protein interactions for RNA: ENST00000565256.1

SNHG20-203, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best)

Gene SNHG20, Length 1,234 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-203ENST00000565256 NWD1Q149M9 1564 aa18.52■□□□□ 0.56
SNHG20-203ENST00000565256 LRPPRCP42704 1394 aaKnown RBP18.52■□□□□ 0.55
SNHG20-203ENST00000565256 SLC26A8Q96RN1 970 aa18.51■□□□□ 0.55
SNHG20-203ENST00000565256 TBX22Q9Y458 520 aa18.51■□□□□ 0.55
SNHG20-203ENST00000565256 CENPJQ9HC77 1338 aaPredicted RBP18.5■□□□□ 0.55
SNHG20-203ENST00000565256 LRP6O75581 1613 aa18.5■□□□□ 0.55
SNHG20-203ENST00000565256 PROSER2Q86WR7 435 aaPredicted RBP18.5■□□□□ 0.55
SNHG20-203ENST00000565256 NKTRP30414 1462 aaKnown RBP18.5■□□□□ 0.55
SNHG20-203ENST00000565256 QRICH2Q9H0J4 1663 aa18.5■□□□□ 0.55
SNHG20-203ENST00000565256 TMF1P82094 1093 aa18.49■□□□□ 0.55
SNHG20-203ENST00000565256 ABCC11Q96J66 1382 aa18.49■□□□□ 0.55
SNHG20-203ENST00000565256 JCADQ9P266 1359 aa18.49■□□□□ 0.55
SNHG20-203ENST00000565256 DIP2AQ14689 1571 aa18.49■□□□□ 0.55
SNHG20-203ENST00000565256 PHLPP1O60346 1717 aa18.49■□□□□ 0.55
SNHG20-203ENST00000565256 COL16A1Q07092 1604 aaPredicted RBP18.49■□□□□ 0.55
SNHG20-203ENST00000565256 UPF1Q92900 1129 aaKnown RBP eCLIP18.48■□□□□ 0.55
SNHG20-203ENST00000565256 DLC1Q96QB1 1528 aa18.48■□□□□ 0.55
SNHG20-203ENST00000565256 SBNO2Q9Y2G9 1366 aa18.47■□□□□ 0.55
SNHG20-203ENST00000565256 KNDC1Q76NI1 1749 aa18.47■□□□□ 0.55
SNHG20-203ENST00000565256 SLC24A1O60721 1099 aa18.47■□□□□ 0.55
SNHG20-203ENST00000565256 SLAIN2Q9P270 581 aa18.46■□□□□ 0.55
SNHG20-203ENST00000565256 POLR3GLQ9BT43 218 aa18.45■□□□□ 0.54
SNHG20-203ENST00000565256 MSH6P52701 1360 aa18.44■□□□□ 0.54
SNHG20-203ENST00000565256 TECPR2O15040 1411 aa18.44■□□□□ 0.54
SNHG20-203ENST00000565256 PTPRUQ92729 1446 aa18.44■□□□□ 0.54
SNHG20-203ENST00000565256 SIRT1Q96EB6 747 aa18.44■□□□□ 0.54
SNHG20-203ENST00000565256 PRAM1Q96QH2 718 aa18.44■□□□□ 0.54
SNHG20-203ENST00000565256 POGKQ9P215 609 aa18.43■□□□□ 0.54
SNHG20-203ENST00000565256 SAFB2Q14151 953 aaKnown RBP eCLIP18.42■□□□□ 0.54
SNHG20-203ENST00000565256 CDCA8Q53HL2 280 aa18.41■□□□□ 0.54
SNHG20-203ENST00000565256 WAPLQ7Z5K2 1190 aa18.41■□□□□ 0.54
SNHG20-203ENST00000565256 PIK3R4Q99570 1358 aa18.41■□□□□ 0.54
SNHG20-203ENST00000565256 SRCAPQ6ZRS2 3230 aa18.4■□□□□ 0.54
SNHG20-203ENST00000565256 CHD2O14647 1828 aaKnown RBP18.4■□□□□ 0.54
SNHG20-203ENST00000565256 AMOTL2Q9Y2J4 779 aa18.4■□□□□ 0.54
SNHG20-203ENST00000565256 PLEKHH1Q9ULM0 1364 aa18.4■□□□□ 0.54
SNHG20-203ENST00000565256 XRN1Q8IZH2 1706 aaKnown RBP18.38■□□□□ 0.53
SNHG20-203ENST00000565256 SPATA31A6Q5VVP1 1343 aa18.38■□□□□ 0.53
SNHG20-203ENST00000565256 ROBO2Q9HCK4 1378 aa18.38■□□□□ 0.53
SNHG20-203ENST00000565256 EVC2Q86UK5 1308 aa18.37■□□□□ 0.53
SNHG20-203ENST00000565256 MINK1Q8N4C8 1332 aaPredicted RBP18.37■□□□□ 0.53
SNHG20-203ENST00000565256 TULP4Q9NRJ4 1543 aa18.37■□□□□ 0.53
SNHG20-203ENST00000565256 AHDC1Q5TGY3 1603 aaPredicted RBP18.36■□□□□ 0.53
SNHG20-203ENST00000565256 ZNF772Q68DY9 489 aaPredicted RBP18.36■□□□□ 0.53
SNHG20-203ENST00000565256 PUS7Q96PZ0 661 aaKnown RBP18.35■□□□□ 0.53
SNHG20-203ENST00000565256 SHPRHQ149N8 1683 aa18.34■□□□□ 0.53
SNHG20-203ENST00000565256 MIER1Q8N108 512 aa18.34■□□□□ 0.53
SNHG20-203ENST00000565256 MYOM1P52179 1685 aa18.34■□□□□ 0.53
SNHG20-203ENST00000565256 PTCH1Q13635 1447 aa18.33■□□□□ 0.53
SNHG20-203ENST00000565256 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.33■□□□□ 0.52
SNHG20-203ENST00000565256 CDK12Q9NYV4 1490 aaPredicted RBP18.33■□□□□ 0.52
SNHG20-203ENST00000565256 MEX3CQ5U5Q3 659 aaKnown RBP18.32■□□□□ 0.52
SNHG20-203ENST00000565256 NCOA3Q9Y6Q9 1424 aa18.32■□□□□ 0.52
SNHG20-203ENST00000565256 CDK19Q9BWU1 502 aa18.31■□□□□ 0.52
SNHG20-203ENST00000565256 CABP2Q9NPB3 220 aa18.3■□□□□ 0.52
SNHG20-203ENST00000565256 RXRBP28702 533 aa18.29■□□□□ 0.52
SNHG20-203ENST00000565256 PANK3Q9H999 370 aa18.29■□□□□ 0.52
SNHG20-203ENST00000565256 WASLO00401 505 aaPredicted RBP18.28■□□□□ 0.52
SNHG20-203ENST00000565256 SRPK2P78362 688 aaKnown RBP18.28■□□□□ 0.52
SNHG20-203ENST00000565256 ADGRB2O60241 1585 aa18.27■□□□□ 0.52
SNHG20-203ENST00000565256 PER1O15534 1290 aaPredicted RBP18.26■□□□□ 0.51
SNHG20-203ENST00000565256 ANP32CO43423 234 aa18.26■□□□□ 0.51
SNHG20-203ENST00000565256 RGS12O14924 1447 aa18.25■□□□□ 0.51
SNHG20-203ENST00000565256 BRINP3Q76B58 766 aa18.25■□□□□ 0.51
SNHG20-203ENST00000565256 SLC12A5Q9H2X9 1139 aa18.25■□□□□ 0.51
SNHG20-203ENST00000565256 AFF2P51816 1311 aa18.24■□□□□ 0.51
SNHG20-203ENST00000565256 CADPS2Q86UW7 1296 aa18.24■□□□□ 0.51
SNHG20-203ENST00000565256 TMC1Q8TDI8 760 aa18.24■□□□□ 0.51
SNHG20-203ENST00000565256 ATAD2Q6PL18 1390 aa18.24■□□□□ 0.51
SNHG20-203ENST00000565256 NUTM2BA6NNL0 878 aaPredicted RBP18.23■□□□□ 0.51
SNHG20-203ENST00000565256 NUTM2EB1AL46 878 aaPredicted RBP18.23■□□□□ 0.51
SNHG20-203ENST00000565256 NUTM2AQ8IVF1 878 aaPredicted RBP18.23■□□□□ 0.51
SNHG20-203ENST00000565256 C19orf44Q9H6X5 657 aa18.23■□□□□ 0.51
SNHG20-203ENST00000565256 C14orf37Q86TY3 774 aa18.22■□□□□ 0.51
SNHG20-203ENST00000565256 NINLQ9Y2I6 1382 aa18.21■□□□□ 0.51
SNHG20-203ENST00000565256 NUDT16Q96DE0 195 aaKnown RBP18.21■□□□□ 0.51
SNHG20-203ENST00000565256 ATF3P18847 181 aa18.2■□□□□ 0.5
SNHG20-203ENST00000565256 CARD14Q9BXL6 1004 aa18.2■□□□□ 0.5
SNHG20-203ENST00000565256 PRKRIP1Q9H875 184 aaPredicted RBP18.2■□□□□ 0.5
SNHG20-203ENST00000565256 NALCNQ8IZF0 1738 aa18.2■□□□□ 0.5
SNHG20-203ENST00000565256 PRR36Q9H6K5 1346 aa18.18■□□□□ 0.5
SNHG20-203ENST00000565256 CABP1Q9NZU7 370 aa18.17■□□□□ 0.5
SNHG20-203ENST00000565256 KNSTRNQ9Y448 316 aa18.17■□□□□ 0.5
SNHG20-203ENST00000565256 CCDC61Q9Y6R9 512 aa18.17■□□□□ 0.5
SNHG20-203ENST00000565256 ATP7BP35670 1465 aa18.17■□□□□ 0.5
SNHG20-203ENST00000565256 ANKRD36BQ8N2N9 1353 aa18.17■□□□□ 0.5
SNHG20-203ENST00000565256 NHSL1Q5SYE7 1610 aa18.16■□□□□ 0.5
SNHG20-203ENST00000565256 USP32Q8NFA0 1604 aa18.16■□□□□ 0.5
SNHG20-203ENST00000565256 DCCP43146 1447 aa18.16■□□□□ 0.5
SNHG20-203ENST00000565256 MST1RQ04912 1400 aa18.16■□□□□ 0.5
SNHG20-203ENST00000565256 FMN2Q9NZ56 1722 aa18.16■□□□□ 0.5
SNHG20-203ENST00000565256 ADGRL3Q9HAR2 1447 aa18.15■□□□□ 0.5
SNHG20-203ENST00000565256 CD163L1Q9NR16 1453 aa18.15■□□□□ 0.5
SNHG20-203ENST00000565256 RGPD8O14715 1765 aaPredicted RBP18.15■□□□□ 0.5
SNHG20-203ENST00000565256 CNGB1Q14028 1251 aaPredicted RBP18.15■□□□□ 0.5
SNHG20-203ENST00000565256 AMER1Q5JTC6 1135 aaPredicted RBP18.15■□□□□ 0.5
SNHG20-203ENST00000565256 CDC42BPGQ6DT37 1551 aa18.15■□□□□ 0.5
SNHG20-203ENST00000565256 TOPAZ1Q8N9V7 1692 aa18.15■□□□□ 0.5
SNHG20-203ENST00000565256 PPIP5K1Q6PFW1 1433 aa18.15■□□□□ 0.5
SNHG20-203ENST00000565256 RBM6P78332 1123 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms