RNA–Protein interactions for RNA: ENST00000564403.6

TCF4-224, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-224ENST00000564403 PARD3Q8TEW0 1356 aa12.03□□□□□ -0.48
TCF4-224ENST00000564403 CANXP27824 592 aaKnown RBP12.03□□□□□ -0.48
TCF4-224ENST00000564403 STAC3Q96MF2 364 aa12.03□□□□□ -0.48
TCF4-224ENST00000564403 MAP3K4Q9Y6R4 1608 aa12.03□□□□□ -0.48
TCF4-224ENST00000564403 LMTK2Q8IWU2 1503 aa12.03□□□□□ -0.48
TCF4-224ENST00000564403 SAFB2Q14151 953 aaKnown RBP eCLIP12.03□□□□□ -0.48
TCF4-224ENST00000564403 NLRP13Q86W25 1043 aa12.03□□□□□ -0.48
TCF4-224ENST00000564403 LAMC1P11047 1609 aa12.02□□□□□ -0.48
TCF4-224ENST00000564403 RICTORQ6R327 1708 aa12.02□□□□□ -0.49
TCF4-224ENST00000564403 KNSTRNQ9Y448 316 aa12.02□□□□□ -0.49
TCF4-224ENST00000564403 KIF1BO60333 1816 aa12.01□□□□□ -0.49
TCF4-224ENST00000564403 CLSTN1O94985 981 aa12.01□□□□□ -0.49
TCF4-224ENST00000564403 SIGLEC1Q9BZZ2 1709 aa12.01□□□□□ -0.49
TCF4-224ENST00000564403 BRD4O60885 1362 aaPredicted RBP12.01□□□□□ -0.49
TCF4-224ENST00000564403 C14orf93Q9H972 538 aaKnown RBP12□□□□□ -0.49
TCF4-224ENST00000564403 IQGAP1P46940 1657 aa12□□□□□ -0.49
TCF4-224ENST00000564403 STK26Q9P289 416 aa12□□□□□ -0.49
TCF4-224ENST00000564403 CARD14Q9BXL6 1004 aa11.99□□□□□ -0.49
TCF4-224ENST00000564403 DIP2BQ9P265 1576 aa11.98□□□□□ -0.49
TCF4-224ENST00000564403 LRPPRCP42704 1394 aaKnown RBP11.98□□□□□ -0.49
TCF4-224ENST00000564403 ADGRB3O60242 1522 aa11.98□□□□□ -0.49
TCF4-224ENST00000564403 MYOM2P54296 1465 aa11.98□□□□□ -0.49
TCF4-224ENST00000564403 SLC12A5Q9H2X9 1139 aa11.97□□□□□ -0.49
TCF4-224ENST00000564403 EIF3AQ14152 1382 aaKnown RBP11.97□□□□□ -0.49
TCF4-224ENST00000564403 CDCA8Q53HL2 280 aa11.97□□□□□ -0.49
TCF4-224ENST00000564403 CENPJQ9HC77 1338 aaPredicted RBP11.97□□□□□ -0.49
TCF4-224ENST00000564403 SYNMO15061 1565 aa11.97□□□□□ -0.49
TCF4-224ENST00000564403 PPP2R1AP30153 589 aa11.96□□□□□ -0.49
TCF4-224ENST00000564403 CDCA7LQ96GN5 454 aa11.96□□□□□ -0.49
TCF4-224ENST00000564403 ADAMTS8Q9UP79 889 aa11.96□□□□□ -0.49
TCF4-224ENST00000564403 CAMSAP1Q5T5Y3 1602 aa11.96□□□□□ -0.49
TCF4-224ENST00000564403 PIK3C2GO75747 1445 aa11.96□□□□□ -0.49
TCF4-224ENST00000564403 ERVK-7P63135 1459 aa11.96□□□□□ -0.49
TCF4-224ENST00000564403 GLI2P10070 1586 aa11.96□□□□□ -0.5
TCF4-224ENST00000564403 VGFO15240 615 aaPredicted RBP11.95□□□□□ -0.5
TCF4-224ENST00000564403 TNNT2P45379 298 aaPredicted RBP11.95□□□□□ -0.5
TCF4-224ENST00000564403 NRXN1Q9ULB1 1477 aa11.95□□□□□ -0.5
TCF4-224ENST00000564403 NUDCQ9Y266 331 aa11.95□□□□□ -0.5
TCF4-224ENST00000564403 STAG3Q9UJ98 1225 aa11.94□□□□□ -0.5
TCF4-224ENST00000564403 IFT172Q9UG01 1749 aa11.94□□□□□ -0.5
TCF4-224ENST00000564403 B4GALNT3Q6L9W6 998 aa11.94□□□□□ -0.5
TCF4-224ENST00000564403 SLC52A1Q9NWF4 448 aa11.93□□□□□ -0.5
TCF4-224ENST00000564403 RPGRIP1LQ68CZ1 1315 aa11.93□□□□□ -0.5
TCF4-224ENST00000564403 PLCD4Q9BRC7 762 aa11.93□□□□□ -0.5
TCF4-224ENST00000564403 CABP2Q9NPB3 220 aa11.93□□□□□ -0.5
TCF4-224ENST00000564403 FANCIQ9NVI1 1328 aa11.92□□□□□ -0.5
TCF4-224ENST00000564403 NEURL4Q96JN8 1562 aa11.92□□□□□ -0.5
TCF4-224ENST00000564403 PSMD1Q99460 953 aa11.92□□□□□ -0.5
TCF4-224ENST00000564403 PPLO60437 1756 aa11.92□□□□□ -0.5
TCF4-224ENST00000564403 FAM43BQ6ZT52 329 aaPredicted RBP11.92□□□□□ -0.5
TCF4-224ENST00000564403 ADGRB1O14514 1584 aa11.91□□□□□ -0.5
TCF4-224ENST00000564403 ARHGAP31Q2M1Z3 1444 aa11.91□□□□□ -0.5
TCF4-224ENST00000564403 SMG6Q86US8 1419 aaKnown RBP11.91□□□□□ -0.5
TCF4-224ENST00000564403 KIAA1210Q9ULL0 1709 aa11.91□□□□□ -0.5
TCF4-224ENST00000564403 GRIPAP1Q4V328 841 aa11.91□□□□□ -0.5
TCF4-224ENST00000564403 CCDC146Q8IYE0 955 aa11.91□□□□□ -0.5
TCF4-224ENST00000564403 RTL5Q5HYW3 569 aaPredicted RBP11.9□□□□□ -0.5
TCF4-224ENST00000564403 PRDM4Q9UKN5 801 aa11.9□□□□□ -0.5
TCF4-224ENST00000564403 NEXMIFQ5QGS0 1516 aa11.9□□□□□ -0.51
TCF4-224ENST00000564403 MYOM1P52179 1685 aa11.89□□□□□ -0.51
TCF4-224ENST00000564403 RRP9O43818 475 aaKnown RBP11.89□□□□□ -0.51
TCF4-224ENST00000564403 MYO5BQ9ULV0 1848 aa11.89□□□□□ -0.51
TCF4-224ENST00000564403 MINK1Q8N4C8 1332 aaPredicted RBP11.89□□□□□ -0.51
TCF4-224ENST00000564403 CERS3Q8IU89 383 aa11.89□□□□□ -0.51
TCF4-224ENST00000564403 PIK3C2BO00750 1634 aa11.88□□□□□ -0.51
TCF4-224ENST00000564403 HSP90AA2PQ14568 343 aaPredicted RBP11.88□□□□□ -0.51
TCF4-224ENST00000564403 PRAM1Q96QH2 718 aa11.88□□□□□ -0.51
TCF4-224ENST00000564403 ASXL1Q8IXJ9 1541 aa11.88□□□□□ -0.51
TCF4-224ENST00000564403 WDR43Q15061 677 aaKnown RBP eCLIP11.87□□□□□ -0.51
TCF4-224ENST00000564403 ZMYM4Q5VZL5 1548 aa11.87□□□□□ -0.51
TCF4-224ENST00000564403 PRDM16Q9HAZ2 1276 aa11.87□□□□□ -0.51
TCF4-224ENST00000564403 KDM5AP29375 1690 aaKnown RBP11.87□□□□□ -0.51
TCF4-224ENST00000564403 PREX1Q8TCU6 1659 aa11.86□□□□□ -0.51
TCF4-224ENST00000564403 SRPK2P78362 688 aaKnown RBP11.86□□□□□ -0.51
TCF4-224ENST00000564403 WAPLQ7Z5K2 1190 aa11.86□□□□□ -0.51
TCF4-224ENST00000564403 PPP4R2Q9NY27 417 aa11.86□□□□□ -0.51
TCF4-224ENST00000564403 POGKQ9P215 609 aa11.85□□□□□ -0.51
TCF4-224ENST00000564403 NSD3Q9BZ95 1437 aa11.85□□□□□ -0.51
TCF4-224ENST00000564403 SBNO2Q9Y2G9 1366 aa11.85□□□□□ -0.51
TCF4-224ENST00000564403 PLIN1O60240 522 aa11.85□□□□□ -0.51
TCF4-224ENST00000564403 CEBPAP49715 358 aaPredicted RBP11.85□□□□□ -0.51
TCF4-224ENST00000564403 ESF1Q9H501 851 aaKnown RBP11.85□□□□□ -0.51
TCF4-224ENST00000564403 SETBP1Q9Y6X0 1596 aa11.85□□□□□ -0.51
TCF4-224ENST00000564403 KIF13AQ9H1H9 1805 aa11.84□□□□□ -0.51
TCF4-224ENST00000564403 TMEM131LA2VDJ0 1609 aa11.84□□□□□ -0.51
TCF4-224ENST00000564403 EVC2Q86UK5 1308 aa11.84□□□□□ -0.51
TCF4-224ENST00000564403 MORC1Q86VD1 984 aa11.84□□□□□ -0.51
TCF4-224ENST00000564403 PLCD3Q8N3E9 789 aa11.84□□□□□ -0.51
TCF4-224ENST00000564403 ZNF526Q8TF50 670 aaPredicted RBP11.84□□□□□ -0.51
TCF4-224ENST00000564403 CLTCQ00610 1675 aaKnown RBP11.83□□□□□ -0.51
TCF4-224ENST00000564403 FAM193AP78312 1265 aa11.83□□□□□ -0.51
TCF4-224ENST00000564403 RCAN3Q9UKA8 241 aa11.83□□□□□ -0.51
TCF4-224ENST00000564403 ZMYM3Q14202 1370 aa11.83□□□□□ -0.52
TCF4-224ENST00000564403 PLEKHH1Q9ULM0 1364 aa11.83□□□□□ -0.52
TCF4-224ENST00000564403 QRICH2Q9H0J4 1663 aa11.83□□□□□ -0.52
TCF4-224ENST00000564403 APAF1O14727 1248 aa11.83□□□□□ -0.52
TCF4-224ENST00000564403 CWC22Q9HCG8 908 aaKnown RBP11.83□□□□□ -0.52
TCF4-224ENST00000564403 ZNF692Q9BU19 519 aaPredicted RBP11.83□□□□□ -0.52
TCF4-224ENST00000564403 RNF123Q5XPI4 1314 aa11.82□□□□□ -0.52
TCF4-224ENST00000564403 ZC3H13Q5T200 1668 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms