RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 SETBP1Q9Y6X0 1596 aa14.64□□□□□ -0.07
TCF4-222ENST00000564228 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.63□□□□□ -0.07
TCF4-222ENST00000564228 SCAF11Q99590 1463 aaKnown RBP14.62□□□□□ -0.07
TCF4-222ENST00000564228 HDGFP51858 240 aaKnown RBP14.62□□□□□ -0.07
TCF4-222ENST00000564228 TMEM132EQ6IEE7 984 aa14.62□□□□□ -0.07
TCF4-222ENST00000564228 ALKQ9UM73 1620 aa14.61□□□□□ -0.07
TCF4-222ENST00000564228 ADGRB1O14514 1584 aa14.61□□□□□ -0.07
TCF4-222ENST00000564228 THEMISQ8N1K5 641 aaPredicted RBP14.6□□□□□ -0.07
TCF4-222ENST00000564228 DDRGK1Q96HY6 314 aa14.6□□□□□ -0.07
TCF4-222ENST00000564228 NRXN3Q9Y4C0 1643 aa14.6□□□□□ -0.07
TCF4-222ENST00000564228 GSE1Q14687 1217 aa14.6□□□□□ -0.07
TCF4-222ENST00000564228 SLIT1O75093 1534 aa14.6□□□□□ -0.07
TCF4-222ENST00000564228 SETD1AO15047 1707 aaKnown RBP14.59□□□□□ -0.07
TCF4-222ENST00000564228 TXNDC2Q86VQ3 553 aa14.59□□□□□ -0.07
TCF4-222ENST00000564228 RSPH6AQ9H0K4 717 aa14.59□□□□□ -0.07
TCF4-222ENST00000564228 EIF3AQ14152 1382 aaKnown RBP14.59□□□□□ -0.07
TCF4-222ENST00000564228 ASXL1Q8IXJ9 1541 aa14.59□□□□□ -0.07
TCF4-222ENST00000564228 LTKP29376 864 aa14.58□□□□□ -0.07
TCF4-222ENST00000564228 BACH2Q9BYV9 841 aa14.58□□□□□ -0.07
TCF4-222ENST00000564228 LAS1LQ9Y4W2 734 aaKnown RBP14.58□□□□□ -0.07
TCF4-222ENST00000564228 EID1Q9Y6B2 187 aa14.58□□□□□ -0.07
TCF4-222ENST00000564228 ARHGAP23Q9P227 1491 aa14.58□□□□□ -0.08
TCF4-222ENST00000564228 KDM4FA0A1W2PPD8 638 aa14.58□□□□□ -0.08
TCF4-222ENST00000564228 PDE4AP27815 886 aa14.58□□□□□ -0.08
TCF4-222ENST00000564228 TRAK1Q9UPV9 953 aa14.58□□□□□ -0.08
TCF4-222ENST00000564228 POLR3GLQ9BT43 218 aa14.57□□□□□ -0.08
TCF4-222ENST00000564228 ARHGEF28Q8N1W1 1705 aaKnown RBP14.57□□□□□ -0.08
TCF4-222ENST00000564228 BRPF3Q9ULD4 1205 aa14.56□□□□□ -0.08
TCF4-222ENST00000564228 KIF7Q2M1P5 1343 aa14.56□□□□□ -0.08
TCF4-222ENST00000564228 STK26Q9P289 416 aa14.55□□□□□ -0.08
TCF4-222ENST00000564228 QRICH2Q9H0J4 1663 aa14.55□□□□□ -0.08
TCF4-222ENST00000564228 FOXD4L1Q9NU39 408 aa14.54□□□□□ -0.08
TCF4-222ENST00000564228 PLEKHG1Q9ULL1 1385 aa14.54□□□□□ -0.08
TCF4-222ENST00000564228 FAM43AQ8N2R8 423 aa14.54□□□□□ -0.08
TCF4-222ENST00000564228 TESK2Q96S53 571 aa14.54□□□□□ -0.08
TCF4-222ENST00000564228 NPM2Q86SE8 214 aaKnown RBP14.53□□□□□ -0.08
TCF4-222ENST00000564228 YTHDC2Q9H6S0 1430 aaKnown RBP14.53□□□□□ -0.08
TCF4-222ENST00000564228 ADAMTS13Q76LX8 1427 aa14.51□□□□□ -0.09
TCF4-222ENST00000564228 METP08581 1390 aa14.51□□□□□ -0.09
TCF4-222ENST00000564228 DISP3Q9P2K9 1392 aa14.51□□□□□ -0.09
TCF4-222ENST00000564228 CENPJQ9HC77 1338 aaPredicted RBP14.51□□□□□ -0.09
TCF4-222ENST00000564228 SLC26A8Q96RN1 970 aa14.51□□□□□ -0.09
TCF4-222ENST00000564228 TMF1P82094 1093 aa14.51□□□□□ -0.09
TCF4-222ENST00000564228 ANKLE2Q86XL3 938 aa14.51□□□□□ -0.09
TCF4-222ENST00000564228 RRP1P56182 461 aaKnown RBP14.5□□□□□ -0.09
TCF4-222ENST00000564228 SAFB2Q14151 953 aaKnown RBP eCLIP14.49□□□□□ -0.09
TCF4-222ENST00000564228 EIF5BO60841 1220 aaKnown RBP14.49□□□□□ -0.09
TCF4-222ENST00000564228 NFKBIBQ15653 356 aa14.49□□□□□ -0.09
TCF4-222ENST00000564228 KNDC1Q76NI1 1749 aa14.48□□□□□ -0.09
TCF4-222ENST00000564228 LRPPRCP42704 1394 aaKnown RBP14.48□□□□□ -0.09
TCF4-222ENST00000564228 DIP2AQ14689 1571 aa14.47□□□□□ -0.09
TCF4-222ENST00000564228 PRAM1Q96QH2 718 aa14.47□□□□□ -0.09
TCF4-222ENST00000564228 POGKQ9P215 609 aa14.47□□□□□ -0.09
TCF4-222ENST00000564228 MED14O60244 1454 aa14.46□□□□□ -0.09
TCF4-222ENST00000564228 FRAT1Q92837 279 aaPredicted RBP14.46□□□□□ -0.09
TCF4-222ENST00000564228 PIAS4Q8N2W9 510 aaPredicted RBP14.45□□□□□ -0.1
TCF4-222ENST00000564228 SBNO2Q9Y2G9 1366 aa14.45□□□□□ -0.1
TCF4-222ENST00000564228 DLC1Q96QB1 1528 aa14.45□□□□□ -0.1
TCF4-222ENST00000564228 PNISRQ8TF01 805 aaKnown RBP14.45□□□□□ -0.1
TCF4-222ENST00000564228 KTN1Q86UP2 1357 aaKnown RBP14.45□□□□□ -0.1
TCF4-222ENST00000564228 ABCC11Q96J66 1382 aa14.45□□□□□ -0.1
TCF4-222ENST00000564228 NCKAP5LQ9HCH0 1330 aa14.44□□□□□ -0.1
TCF4-222ENST00000564228 PKNOX2Q96KN3 472 aa14.44□□□□□ -0.1
TCF4-222ENST00000564228 TBX22Q9Y458 520 aa14.44□□□□□ -0.1
TCF4-222ENST00000564228 HSPA2P54652 639 aa14.43□□□□□ -0.1
TCF4-222ENST00000564228 GLIPR1L2Q4G1C9 344 aa14.43□□□□□ -0.1
TCF4-222ENST00000564228 CDCA8Q53HL2 280 aa14.43□□□□□ -0.1
TCF4-222ENST00000564228 WAPLQ7Z5K2 1190 aa14.43□□□□□ -0.1
TCF4-222ENST00000564228 EXOC6Q8TAG9 804 aa14.43□□□□□ -0.1
TCF4-222ENST00000564228 CPS1P31327 1500 aa14.43□□□□□ -0.1
TCF4-222ENST00000564228 MINK1Q8N4C8 1332 aaPredicted RBP14.43□□□□□ -0.1
TCF4-222ENST00000564228 NPHP4O75161 1426 aaPredicted RBP14.42□□□□□ -0.1
TCF4-222ENST00000564228 PTPRUQ92729 1446 aa14.42□□□□□ -0.1
TCF4-222ENST00000564228 PLEKHH1Q9ULM0 1364 aa14.42□□□□□ -0.1
TCF4-222ENST00000564228 MYOM1P52179 1685 aa14.42□□□□□ -0.1
TCF4-222ENST00000564228 LMTK3Q96Q04 1460 aa14.42□□□□□ -0.1
TCF4-222ENST00000564228 BRD4O60885 1362 aaPredicted RBP14.41□□□□□ -0.1
TCF4-222ENST00000564228 CHD2O14647 1828 aaKnown RBP14.41□□□□□ -0.1
TCF4-222ENST00000564228 TECPR2O15040 1411 aa14.41□□□□□ -0.1
TCF4-222ENST00000564228 PDE3BQ13370 1112 aa14.41□□□□□ -0.1
TCF4-222ENST00000564228 TULP4Q9NRJ4 1543 aa14.41□□□□□ -0.1
TCF4-222ENST00000564228 AMOTL2Q9Y2J4 779 aa14.41□□□□□ -0.1
TCF4-222ENST00000564228 RCAN3Q9UKA8 241 aa14.4□□□□□ -0.1
TCF4-222ENST00000564228 XRN1Q8IZH2 1706 aaKnown RBP14.4□□□□□ -0.1
TCF4-222ENST00000564228 EVC2Q86UK5 1308 aa14.4□□□□□ -0.1
TCF4-222ENST00000564228 ROBO2Q9HCK4 1378 aa14.39□□□□□ -0.11
TCF4-222ENST00000564228 FAM135BQ49AJ0 1406 aa14.38□□□□□ -0.11
TCF4-222ENST00000564228 VIRMAQ69YN4 1812 aaKnown RBP14.38□□□□□ -0.11
TCF4-222ENST00000564228 DAXXQ9UER7 740 aaPredicted RBP14.37□□□□□ -0.11
TCF4-222ENST00000564228 SRPK2P78362 688 aaKnown RBP14.37□□□□□ -0.11
TCF4-222ENST00000564228 CNGB1Q14028 1251 aaPredicted RBP14.37□□□□□ -0.11
TCF4-222ENST00000564228 CNKSR2Q8WXI2 1034 aa14.37□□□□□ -0.11
TCF4-222ENST00000564228 CABP2Q9NPB3 220 aa14.37□□□□□ -0.11
TCF4-222ENST00000564228 INSRP06213 1382 aa14.37□□□□□ -0.11
TCF4-222ENST00000564228 PIK3R4Q99570 1358 aa14.37□□□□□ -0.11
TCF4-222ENST00000564228 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.36□□□□□ -0.11
TCF4-222ENST00000564228 STRCQ7RTU9 1775 aa14.36□□□□□ -0.11
TCF4-222ENST00000564228 SIRT1Q96EB6 747 aa14.36□□□□□ -0.11
TCF4-222ENST00000564228 KCNA6P17658 529 aa14.35□□□□□ -0.11
TCF4-222ENST00000564228 TMC1Q8TDI8 760 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms