RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 ANO8Q9HCE9 1232 aaPredicted RBP24.07■■□□□ 1.44
GDE1-203ENST00000564172 CNGB1Q14028 1251 aaPredicted RBP24.06■■□□□ 1.44
GDE1-203ENST00000564172 WAPLQ7Z5K2 1190 aa24.06■■□□□ 1.44
GDE1-203ENST00000564172 TBX22Q9Y458 520 aa24.06■■□□□ 1.44
GDE1-203ENST00000564172 TULP4Q9NRJ4 1543 aa24.05■■□□□ 1.44
GDE1-203ENST00000564172 MINK1Q8N4C8 1332 aaPredicted RBP24.05■■□□□ 1.44
GDE1-203ENST00000564172 SIRT1Q96EB6 747 aa24.04■■□□□ 1.44
GDE1-203ENST00000564172 TECPR2O15040 1411 aa24.04■■□□□ 1.44
GDE1-203ENST00000564172 ANKLE2Q86XL3 938 aa24.04■■□□□ 1.44
GDE1-203ENST00000564172 MYOM1P52179 1685 aa24.04■■□□□ 1.44
GDE1-203ENST00000564172 PLEKHH1Q9ULM0 1364 aa24.03■■□□□ 1.44
GDE1-203ENST00000564172 ERICH6BQ5W0A0 696 aa24.02■■□□□ 1.44
GDE1-203ENST00000564172 FAM135BQ49AJ0 1406 aa24.01■■□□□ 1.43
GDE1-203ENST00000564172 CABP2Q9NPB3 220 aa24.01■■□□□ 1.43
GDE1-203ENST00000564172 KNSTRNQ9Y448 316 aa23.99■■□□□ 1.43
GDE1-203ENST00000564172 KNDC1Q76NI1 1749 aa23.99■■□□□ 1.43
GDE1-203ENST00000564172 KTN1Q86UP2 1357 aaKnown RBP23.99■■□□□ 1.43
GDE1-203ENST00000564172 SRPK2P78362 688 aaKnown RBP23.98■■□□□ 1.43
GDE1-203ENST00000564172 RALBP1Q15311 655 aa23.98■■□□□ 1.43
GDE1-203ENST00000564172 CCDC184Q52MB2 194 aa23.98■■□□□ 1.43
GDE1-203ENST00000564172 TMC1Q8TDI8 760 aa23.98■■□□□ 1.43
GDE1-203ENST00000564172 SLC12A5Q9H2X9 1139 aa23.98■■□□□ 1.43
GDE1-203ENST00000564172 PTPRUQ92729 1446 aa23.98■■□□□ 1.43
GDE1-203ENST00000564172 CPS1P31327 1500 aa23.97■■□□□ 1.43
GDE1-203ENST00000564172 ROBO2Q9HCK4 1378 aa23.97■■□□□ 1.43
GDE1-203ENST00000564172 DIP2AQ14689 1571 aa23.97■■□□□ 1.43
GDE1-203ENST00000564172 CDK19Q9BWU1 502 aa23.96■■□□□ 1.43
GDE1-203ENST00000564172 AMOTL2Q9Y2J4 779 aa23.96■■□□□ 1.43
GDE1-203ENST00000564172 KDM4FA0A1W2PPD8 638 aa23.95■■□□□ 1.42
GDE1-203ENST00000564172 CC2D1BQ5T0F9 858 aaKnown RBP23.95■■□□□ 1.42
GDE1-203ENST00000564172 CARD14Q9BXL6 1004 aa23.95■■□□□ 1.42
GDE1-203ENST00000564172 PARD3Q8TEW0 1356 aa23.94■■□□□ 1.42
GDE1-203ENST00000564172 AMER1Q5JTC6 1135 aaPredicted RBP23.94■■□□□ 1.42
GDE1-203ENST00000564172 ATAD2Q6PL18 1390 aa23.93■■□□□ 1.42
GDE1-203ENST00000564172 MRS2Q9HD23 443 aa23.92■■□□□ 1.42
GDE1-203ENST00000564172 MYBBP1AQ9BQG0 1328 aaKnown RBP23.91■■□□□ 1.42
GDE1-203ENST00000564172 PIK3R4Q99570 1358 aa23.91■■□□□ 1.42
GDE1-203ENST00000564172 WASLO00401 505 aaPredicted RBP23.9■■□□□ 1.42
GDE1-203ENST00000564172 NINLQ9Y2I6 1382 aa23.9■■□□□ 1.42
GDE1-203ENST00000564172 NPC1L1Q9UHC9 1359 aa23.89■■□□□ 1.41
GDE1-203ENST00000564172 ANKRD36BQ8N2N9 1353 aa23.87■■□□□ 1.41
GDE1-203ENST00000564172 NPHP4O75161 1426 aaPredicted RBP23.87■■□□□ 1.41
GDE1-203ENST00000564172 PTCH1Q13635 1447 aa23.87■■□□□ 1.41
GDE1-203ENST00000564172 EIF5BO60841 1220 aaKnown RBP23.86■■□□□ 1.41
GDE1-203ENST00000564172 NCKAP5LQ9HCH0 1330 aa23.86■■□□□ 1.41
GDE1-203ENST00000564172 KCNA6P17658 529 aa23.84■■□□□ 1.41
GDE1-203ENST00000564172 NSD3Q9BZ95 1437 aa23.84■■□□□ 1.41
GDE1-203ENST00000564172 NLRP13Q86W25 1043 aa23.83■■□□□ 1.41
GDE1-203ENST00000564172 XRN1Q8IZH2 1706 aaKnown RBP23.83■■□□□ 1.41
GDE1-203ENST00000564172 CABP1Q9NZU7 370 aa23.83■■□□□ 1.4
GDE1-203ENST00000564172 BRD4O60885 1362 aaPredicted RBP23.83■■□□□ 1.4
GDE1-203ENST00000564172 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.82■■□□□ 1.4
GDE1-203ENST00000564172 DAXXQ9UER7 740 aaPredicted RBP23.82■■□□□ 1.4
GDE1-203ENST00000564172 RBM19Q9Y4C8 960 aaKnown RBP23.82■■□□□ 1.4
GDE1-203ENST00000564172 A0A1W2PP64 1363 aa23.81■■□□□ 1.4
GDE1-203ENST00000564172 TERF2IPQ9NYB0 399 aa23.81■■□□□ 1.4
GDE1-203ENST00000564172 FAM9BQ8IZU0 186 aa23.8■■□□□ 1.4
GDE1-203ENST00000564172 NUDT16Q96DE0 195 aaKnown RBP23.79■■□□□ 1.4
GDE1-203ENST00000564172 ADGRB2O60241 1585 aa23.79■■□□□ 1.4
GDE1-203ENST00000564172 CD163L1Q9NR16 1453 aa23.79■■□□□ 1.4
GDE1-203ENST00000564172 CCDC61Q9Y6R9 512 aa23.78■■□□□ 1.4
GDE1-203ENST00000564172 CGNL1Q0VF96 1302 aa23.77■■□□□ 1.4
GDE1-203ENST00000564172 CHD2O14647 1828 aaKnown RBP23.76■■□□□ 1.39
GDE1-203ENST00000564172 HDGFL2Q7Z4V5 671 aaPredicted RBP23.76■■□□□ 1.39
GDE1-203ENST00000564172 PNISRQ8TF01 805 aaKnown RBP23.76■■□□□ 1.39
GDE1-203ENST00000564172 PPP2R1AP30153 589 aa23.76■■□□□ 1.39
GDE1-203ENST00000564172 HSPA2P54652 639 aa23.75■■□□□ 1.39
GDE1-203ENST00000564172 PRR36Q9H6K5 1346 aa23.75■■□□□ 1.39
GDE1-203ENST00000564172 PPIP5K1Q6PFW1 1433 aa23.74■■□□□ 1.39
GDE1-203ENST00000564172 ATP7BP35670 1465 aa23.73■■□□□ 1.39
GDE1-203ENST00000564172 USP32Q8NFA0 1604 aa23.73■■□□□ 1.39
GDE1-203ENST00000564172 NSD2O96028 1365 aa23.7■■□□□ 1.38
GDE1-203ENST00000564172 LMTK3Q96Q04 1460 aa23.7■■□□□ 1.38
GDE1-203ENST00000564172 NUTM2FA1L443 756 aa23.69■■□□□ 1.38
GDE1-203ENST00000564172 MORC1Q86VD1 984 aa23.69■■□□□ 1.38
GDE1-203ENST00000564172 CPSF1Q10570 1443 aaKnown RBP23.69■■□□□ 1.38
GDE1-203ENST00000564172 HNRNPUQ00839 825 aaKnown RBP eCLIP23.68■■□□□ 1.38
GDE1-203ENST00000564172 SALL2Q9Y467 1007 aaPredicted RBP23.68■■□□□ 1.38
GDE1-203ENST00000564172 FANCIQ9NVI1 1328 aa23.67■■□□□ 1.38
GDE1-203ENST00000564172 DEKP35659 375 aaKnown RBP23.67■■□□□ 1.38
GDE1-203ENST00000564172 FYB1O15117 783 aa23.66■■□□□ 1.38
GDE1-203ENST00000564172 MSH5O43196 834 aa23.65■■□□□ 1.38
GDE1-203ENST00000564172 RBM33Q96EV2 1170 aaKnown RBP23.65■■□□□ 1.38
GDE1-203ENST00000564172 PLEKHG3A1L390 1219 aa23.65■■□□□ 1.38
GDE1-203ENST00000564172 CDC42BPGQ6DT37 1551 aa23.64■■□□□ 1.37
GDE1-203ENST00000564172 ZNF692Q9BU19 519 aaPredicted RBP23.64■■□□□ 1.37
GDE1-203ENST00000564172 GGNBP2Q9H3C7 697 aa23.64■■□□□ 1.37
GDE1-203ENST00000564172 NWD1Q149M9 1564 aa23.63■■□□□ 1.37
GDE1-203ENST00000564172 TNNT2P45379 298 aaPredicted RBP23.62■■□□□ 1.37
GDE1-203ENST00000564172 EDC4Q6P2E9 1401 aaKnown RBP23.62■■□□□ 1.37
GDE1-203ENST00000564172 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.61■■□□□ 1.37
GDE1-203ENST00000564172 TOPAZ1Q8N9V7 1692 aa23.61■■□□□ 1.37
GDE1-203ENST00000564172 ACEP12821 1306 aa23.61■■□□□ 1.37
GDE1-203ENST00000564172 ADGRL3Q9HAR2 1447 aa23.6■■□□□ 1.37
GDE1-203ENST00000564172 ANKARQ7Z5J8 1434 aa23.59■■□□□ 1.37
GDE1-203ENST00000564172 PROSER2Q86WR7 435 aaPredicted RBP23.59■■□□□ 1.37
GDE1-203ENST00000564172 NALCNQ8IZF0 1738 aa23.58■■□□□ 1.37
GDE1-203ENST00000564172 NKTRP30414 1462 aaKnown RBP23.58■■□□□ 1.36
GDE1-203ENST00000564172 PMFBP1Q8TBY8 1022 aa23.56■■□□□ 1.36
GDE1-203ENST00000564172 C14orf37Q86TY3 774 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms