RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 SENP3Q9H4L4 574 aaPredicted RBP7.34□□□□□ -1.23
TUBGCP4-207ENST00000563963 BIVM-ERCC5R4GMW8 1640 aa7.34□□□□□ -1.23
TUBGCP4-207ENST00000563963 AQRO60306 1485 aaKnown RBP eCLIP7.34□□□□□ -1.232e-6■■■■■ 26.9
TUBGCP4-207ENST00000563963 HMGN5P82970 282 aaKnown RBP7.34□□□□□ -1.23
TUBGCP4-207ENST00000563963 GET4Q7L5D6 327 aaPredicted RBP7.34□□□□□ -1.23
TUBGCP4-207ENST00000563963 RPAINQ86UA6 219 aa7.34□□□□□ -1.23
TUBGCP4-207ENST00000563963 SDR16C5Q8N3Y7 309 aa7.34□□□□□ -1.23
TUBGCP4-207ENST00000563963 PES1O00541 588 aaKnown RBP7.34□□□□□ -1.24
TUBGCP4-207ENST00000563963 SCP2P22307 547 aa7.34□□□□□ -1.24
TUBGCP4-207ENST00000563963 GTF2A1P52655 376 aaPredicted RBP7.34□□□□□ -1.24
TUBGCP4-207ENST00000563963 CALR3Q96L12 384 aaKnown RBP7.34□□□□□ -1.24
TUBGCP4-207ENST00000563963 FHAD1B1AJZ9 1412 aa7.33□□□□□ -1.24
TUBGCP4-207ENST00000563963 ANKRD23Q86SG2 305 aa7.33□□□□□ -1.24
TUBGCP4-207ENST00000563963 KIF3AQ9Y496 699 aa7.33□□□□□ -1.24
TUBGCP4-207ENST00000563963 KIF1CO43896 1103 aaKnown RBP7.33□□□□□ -1.24
TUBGCP4-207ENST00000563963 SSFA2P28290 1259 aa7.33□□□□□ -1.24
TUBGCP4-207ENST00000563963 ZNF771Q7L3S4 317 aaPredicted RBP7.33□□□□□ -1.24
TUBGCP4-207ENST00000563963 CERKQ8TCT0 537 aa7.33□□□□□ -1.24
TUBGCP4-207ENST00000563963 ESPNB1AK53 854 aa7.33□□□□□ -1.24
TUBGCP4-207ENST00000563963 SH3BP5O60239 455 aa7.33□□□□□ -1.24
TUBGCP4-207ENST00000563963 LONRF3Q496Y0 759 aa7.33□□□□□ -1.24
TUBGCP4-207ENST00000563963 ITFG2Q969R8 447 aa7.33□□□□□ -1.24
TUBGCP4-207ENST00000563963 CHMP4CQ96CF2 233 aa7.33□□□□□ -1.24
TUBGCP4-207ENST00000563963 GRIN2AQ12879 1464 aa7.33□□□□□ -1.24
TUBGCP4-207ENST00000563963 TRIM6-TRIM34B2RNG4 842 aa7.32□□□□□ -1.24
TUBGCP4-207ENST00000563963 TRIM34Q9BYJ4 488 aa7.32□□□□□ -1.24
TUBGCP4-207ENST00000563963 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.32□□□□□ -1.24
TUBGCP4-207ENST00000563963 STK26Q9P289 416 aa7.32□□□□□ -1.24
TUBGCP4-207ENST00000563963 ANKRD62A6NC57 917 aa7.32□□□□□ -1.24
TUBGCP4-207ENST00000563963 KIF4AO95239 1232 aa7.32□□□□□ -1.24
TUBGCP4-207ENST00000563963 IRX5P78411 483 aaPredicted RBP7.32□□□□□ -1.24
TUBGCP4-207ENST00000563963 TIGD1Q96MW7 591 aa7.32□□□□□ -1.24
TUBGCP4-207ENST00000563963 NCAPGQ9BPX3 1015 aa7.32□□□□□ -1.24
TUBGCP4-207ENST00000563963 NME8Q8N427 588 aa7.31□□□□□ -1.24
TUBGCP4-207ENST00000563963 PEX14O75381 377 aa7.31□□□□□ -1.24
TUBGCP4-207ENST00000563963 IPO7O95373 1038 aaKnown RBP7.31□□□□□ -1.24
TUBGCP4-207ENST00000563963 ZKSCAN2Q63HK3 967 aa7.31□□□□□ -1.24
TUBGCP4-207ENST00000563963 LMOD2Q6P5Q4 547 aa7.31□□□□□ -1.24
TUBGCP4-207ENST00000563963 KNSTRNQ9Y448 316 aa7.31□□□□□ -1.24
TUBGCP4-207ENST00000563963 TPM3P06753 285 aa7.31□□□□□ -1.24
TUBGCP4-207ENST00000563963 KIAA1211Q6ZU35 1233 aa7.31□□□□□ -1.24
TUBGCP4-207ENST00000563963 NUCKS1Q9H1E3 243 aaKnown RBP7.31□□□□□ -1.24
TUBGCP4-207ENST00000563963 CEP170Q5SW79 1584 aa7.31□□□□□ -1.24
TUBGCP4-207ENST00000563963 SETSIPP0DME0 302 aa7.31□□□□□ -1.24
TUBGCP4-207ENST00000563963 CSPP1Q1MSJ5 1256 aa7.31□□□□□ -1.24
TUBGCP4-207ENST00000563963 DDX46Q7L014 1031 aaKnown RBP7.31□□□□□ -1.24
TUBGCP4-207ENST00000563963 ARHGEF1Q92888 912 aaKnown RBP7.31□□□□□ -1.24
TUBGCP4-207ENST00000563963 HDGFL1Q5TGJ6 251 aa7.3□□□□□ -1.24
TUBGCP4-207ENST00000563963 LRCH2Q5VUJ6 765 aa7.3□□□□□ -1.24
TUBGCP4-207ENST00000563963 ATL2Q8NHH9 583 aa7.3□□□□□ -1.24
TUBGCP4-207ENST00000563963 CUX1P39880 1505 aa7.3□□□□□ -1.24
TUBGCP4-207ENST00000563963 PRR29P0C7W0 189 aa7.3□□□□□ -1.24
TUBGCP4-207ENST00000563963 ZFYVE27Q5T4F4 411 aa7.3□□□□□ -1.24
TUBGCP4-207ENST00000563963 PROCA1Q8NCQ7 364 aaPredicted RBP7.3□□□□□ -1.24
TUBGCP4-207ENST00000563963 NEFHP12036 1026 aa7.29□□□□□ -1.24
TUBGCP4-207ENST00000563963 PPP4R2Q9NY27 417 aa7.29□□□□□ -1.24
TUBGCP4-207ENST00000563963 ZSCAN20P17040 1043 aaPredicted RBP7.29□□□□□ -1.24
TUBGCP4-207ENST00000563963 EP400NLQ6ZTU2 488 aa7.29□□□□□ -1.24
TUBGCP4-207ENST00000563963 GOLGA3Q08378 1498 aa7.29□□□□□ -1.24
TUBGCP4-207ENST00000563963 CCP110O43303 1012 aa7.29□□□□□ -1.24
TUBGCP4-207ENST00000563963 KIAA2012Q0VF49 1180 aa7.29□□□□□ -1.24
TUBGCP4-207ENST00000563963 CCDC82Q8N4S0 544 aa7.29□□□□□ -1.24
TUBGCP4-207ENST00000563963 CALCOCO1Q9P1Z2 691 aa7.29□□□□□ -1.24
TUBGCP4-207ENST00000563963 CUL7Q14999 1698 aa7.29□□□□□ -1.24
TUBGCP4-207ENST00000563963 HSP90AB2PQ58FF8 381 aa7.29□□□□□ -1.24
TUBGCP4-207ENST00000563963 ACRBPQ8NEB7 543 aa7.29□□□□□ -1.24
TUBGCP4-207ENST00000563963 MORC4Q8TE76 937 aa7.29□□□□□ -1.24
TUBGCP4-207ENST00000563963 PNMA2Q9UL42 364 aa7.29□□□□□ -1.24
TUBGCP4-207ENST00000563963 EPB41L2O43491 1005 aaKnown RBP7.28□□□□□ -1.24
TUBGCP4-207ENST00000563963 CT47B1P0C2W7 299 aaPredicted RBP7.28□□□□□ -1.24
TUBGCP4-207ENST00000563963 GLI2P10070 1586 aa7.28□□□□□ -1.24
TUBGCP4-207ENST00000563963 TOP2BQ02880 1626 aa7.28□□□□□ -1.24
TUBGCP4-207ENST00000563963 H0YHG0 523 aa7.28□□□□□ -1.24
TUBGCP4-207ENST00000563963 FOSBP53539 338 aa7.28□□□□□ -1.24
TUBGCP4-207ENST00000563963 SARNPP82979 210 aaKnown RBP7.28□□□□□ -1.24
TUBGCP4-207ENST00000563963 MKL1Q969V6 931 aa7.28□□□□□ -1.24
TUBGCP4-207ENST00000563963 GOLGA6L6A8MZA4 724 aa7.28□□□□□ -1.24
TUBGCP4-207ENST00000563963 CTAGE5O15320 804 aa7.28□□□□□ -1.24
TUBGCP4-207ENST00000563963 KIF3CO14782 793 aa7.27□□□□□ -1.24
TUBGCP4-207ENST00000563963 TMC1Q8TDI8 760 aa7.27□□□□□ -1.25
TUBGCP4-207ENST00000563963 SENP3-EIF4A1A0A087X0R7 540 aa7.27□□□□□ -1.25
TUBGCP4-207ENST00000563963 GOLGA6L22H0YM25 854 aa7.27□□□□□ -1.25
TUBGCP4-207ENST00000563963 BRMS1Q9HCU9 246 aa7.27□□□□□ -1.25
TUBGCP4-207ENST00000563963 ABCC10Q5T3U5 1492 aa7.27□□□□□ -1.25
TUBGCP4-207ENST00000563963 GOLGA6L1Q8N7Z2 621 aa7.27□□□□□ -1.25
TUBGCP4-207ENST00000563963 CFAP53Q96M91 514 aa7.27□□□□□ -1.25
TUBGCP4-207ENST00000563963 MAGEC2Q9UBF1 373 aaPredicted RBP7.27□□□□□ -1.25
TUBGCP4-207ENST00000563963 RAD54L2Q9Y4B4 1467 aa7.27□□□□□ -1.25
TUBGCP4-207ENST00000563963 KIF13AQ9H1H9 1805 aa7.26□□□□□ -1.25
TUBGCP4-207ENST00000563963 TESPA1A2RU30 521 aaPredicted RBP7.26□□□□□ -1.25
TUBGCP4-207ENST00000563963 MICAL1Q8TDZ2 1067 aa7.26□□□□□ -1.25
TUBGCP4-207ENST00000563963 UBA5Q9GZZ9 404 aa7.26□□□□□ -1.25
TUBGCP4-207ENST00000563963 PPP1R1BQ9UD71 204 aaPredicted RBP7.26□□□□□ -1.25
TUBGCP4-207ENST00000563963 NFKBIBQ15653 356 aa7.26□□□□□ -1.25
TUBGCP4-207ENST00000563963 RIOK3O14730 519 aaKnown RBP7.25□□□□□ -1.25
TUBGCP4-207ENST00000563963 SLC26A8Q96RN1 970 aa7.25□□□□□ -1.25
TUBGCP4-207ENST00000563963 TRAIPQ9BWF2 469 aa7.25□□□□□ -1.25
TUBGCP4-207ENST00000563963 KDM4CQ9H3R0 1056 aa7.25□□□□□ -1.25
TUBGCP4-207ENST00000563963 METTL14Q9HCE5 456 aaKnown RBP7.25□□□□□ -1.25
TUBGCP4-207ENST00000563963 DONSONQ9NYP3 566 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms