RNA–Protein interactions for RNA: ENST00000563844.1

CASC16-202, Transcript of cancer susceptibility 16, humanhuman

TSL 3 BASIC

Gene CASC16, Length 610 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC16-202ENST00000563844 PCMTD1Q96MG8 357 aaPredicted RBP9.28□□□□□ -0.92
CASC16-202ENST00000563844 PLA2G2EQ9NZK7 142 aa9.28□□□□□ -0.92
CASC16-202ENST00000563844 PCDHGC3Q9UN70 934 aa9.28□□□□□ -0.92
CASC16-202ENST00000563844 MTMR2Q13614 643 aa9.27□□□□□ -0.93
CASC16-202ENST00000563844 MSS51Q4VC12 460 aa9.27□□□□□ -0.93
CASC16-202ENST00000563844 RETREG3Q86VR2 466 aa9.27□□□□□ -0.93
CASC16-202ENST00000563844 SPSB2Q99619 263 aa9.27□□□□□ -0.93
CASC16-202ENST00000563844 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.27□□□□□ -0.93
CASC16-202ENST00000563844 ZBTB3Q9H5J0 574 aa9.27□□□□□ -0.93
CASC16-202ENST00000563844 LIMD1Q9UGP4 676 aa9.27□□□□□ -0.93
CASC16-202ENST00000563844 LILRB3O75022 631 aa9.26□□□□□ -0.93
CASC16-202ENST00000563844 HLA-CQ95604 372 aa9.26□□□□□ -0.93
CASC16-202ENST00000563844 USB1Q9BQ65 265 aaKnown RBP9.26□□□□□ -0.93
CASC16-202ENST00000563844 POLR3EQ9NVU0 708 aa9.26□□□□□ -0.93
CASC16-202ENST00000563844 GUCA2AQ02747 115 aa9.25□□□□□ -0.93
CASC16-202ENST00000563844 PPP2R2DQ66LE6 453 aa9.25□□□□□ -0.93
CASC16-202ENST00000563844 GGCXP38435 758 aa9.24□□□□□ -0.93
CASC16-202ENST00000563844 DESI1Q6ICB0 168 aa9.24□□□□□ -0.93
CASC16-202ENST00000563844 PCDHB15Q9Y5E8 787 aa9.24□□□□□ -0.93
CASC16-202ENST00000563844 C6orf229H3BNL8 230 aa9.23□□□□□ -0.93
CASC16-202ENST00000563844 HRCP23327 699 aa9.23□□□□□ -0.93
CASC16-202ENST00000563844 RNF19BQ6ZMZ0 732 aa9.23□□□□□ -0.93
CASC16-202ENST00000563844 SLC6A16Q9GZN6 736 aa9.22□□□□□ -0.93
CASC16-202ENST00000563844 TLL1O43897 1013 aa9.21□□□□□ -0.94
CASC16-202ENST00000563844 MMP16P51512 607 aa9.21□□□□□ -0.94
CASC16-202ENST00000563844 FAM160A2Q8N612 972 aaPredicted RBP9.21□□□□□ -0.94
CASC16-202ENST00000563844 PROCA1Q8NCQ7 364 aaPredicted RBP9.2□□□□□ -0.94
CASC16-202ENST00000563844 NKX2-3Q8TAU0 364 aa9.2□□□□□ -0.94
CASC16-202ENST00000563844 A0A0G2JS52 829 aa9.19□□□□□ -0.94
CASC16-202ENST00000563844 NUTM2BA6NNL0 878 aaPredicted RBP9.19□□□□□ -0.94
CASC16-202ENST00000563844 NUTM2EB1AL46 878 aaPredicted RBP9.19□□□□□ -0.94
CASC16-202ENST00000563844 DXOO77932 396 aaKnown RBP9.19□□□□□ -0.94
CASC16-202ENST00000563844 QPCTQ16769 361 aa9.19□□□□□ -0.94
CASC16-202ENST00000563844 NUTM2DQ5VT03 806 aaPredicted RBP9.19□□□□□ -0.94
CASC16-202ENST00000563844 NUTM2AQ8IVF1 878 aaPredicted RBP9.19□□□□□ -0.94
CASC16-202ENST00000563844 JUNDP17535 347 aa9.18□□□□□ -0.94
CASC16-202ENST00000563844 PRR7Q8TB68 274 aa9.18□□□□□ -0.94
CASC16-202ENST00000563844 SYMPKQ92797 1274 aaKnown RBP9.18□□□□□ -0.94
CASC16-202ENST00000563844 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.18□□□□□ -0.94
CASC16-202ENST00000563844 CSPP1Q1MSJ5 1256 aa9.17□□□□□ -0.94
CASC16-202ENST00000563844 TMEM259Q4ZIN3 620 aa9.17□□□□□ -0.94
CASC16-202ENST00000563844 ANKLE1Q8NAG6 615 aa9.17□□□□□ -0.94
CASC16-202ENST00000563844 PPP1R18Q6NYC8 613 aa9.16□□□□□ -0.94
CASC16-202ENST00000563844 HELBQ8NG08 1087 aaPredicted RBP9.16□□□□□ -0.94
CASC16-202ENST00000563844 CABLES1Q8TDN4 633 aa9.16□□□□□ -0.94
CASC16-202ENST00000563844 ATP1B4Q9UN42 357 aaPredicted RBP9.16□□□□□ -0.94
CASC16-202ENST00000563844 RGS20O76081 388 aa9.15□□□□□ -0.94
CASC16-202ENST00000563844 S1PR4O95977 384 aa9.15□□□□□ -0.94
CASC16-202ENST00000563844 PTPRNQ16849 979 aa9.15□□□□□ -0.94
CASC16-202ENST00000563844 RTL5Q5HYW3 569 aaPredicted RBP9.15□□□□□ -0.94
CASC16-202ENST00000563844 CFAP99D6REC4 459 aa9.14□□□□□ -0.95
CASC16-202ENST00000563844 RFC5P40937 340 aa9.14□□□□□ -0.95
CASC16-202ENST00000563844 LYPD8Q6UX82 237 aa9.14□□□□□ -0.95
CASC16-202ENST00000563844 RNF223E7ERA6 249 aa9.13□□□□□ -0.95
CASC16-202ENST00000563844 BANK1Q8NDB2 785 aa9.13□□□□□ -0.95
CASC16-202ENST00000563844 SOCS7O14512 581 aa9.12□□□□□ -0.95
CASC16-202ENST00000563844 PRDM9Q9NQV7 894 aa9.11□□□□□ -0.95
CASC16-202ENST00000563844 CCNYL3P0C7X3 344 aa9.09□□□□□ -0.95
CASC16-202ENST00000563844 FBXO31Q5XUX0 539 aaPredicted RBP9.09□□□□□ -0.95
CASC16-202ENST00000563844 NUDT12Q9BQG2 462 aa9.09□□□□□ -0.95
CASC16-202ENST00000563844 EVA1BQ9NVM1 165 aa9.09□□□□□ -0.95
CASC16-202ENST00000563844 FCF1Q9Y324 198 aaKnown RBP9.09□□□□□ -0.95
CASC16-202ENST00000563844 AP1G2O75843 785 aa9.07□□□□□ -0.96
CASC16-202ENST00000563844 RPIAP49247 311 aa9.07□□□□□ -0.96
CASC16-202ENST00000563844 V9GY48 417 aaPredicted RBP9.07□□□□□ -0.96
CASC16-202ENST00000563844 F12P00748 615 aaPredicted RBP9.06□□□□□ -0.96
CASC16-202ENST00000563844 APBB1O00213 710 aa9.05□□□□□ -0.96
CASC16-202ENST00000563844 CTDSPL2Q05D32 466 aa9.05□□□□□ -0.96
CASC16-202ENST00000563844 KCNH2Q12809 1159 aa9.05□□□□□ -0.96
CASC16-202ENST00000563844 TSC1Q92574 1164 aa9.05□□□□□ -0.96
CASC16-202ENST00000563844 PPEF1O14829 653 aaPredicted RBP9.04□□□□□ -0.96
CASC16-202ENST00000563844 ZBTB24O43167 697 aaPredicted RBP9.04□□□□□ -0.96
CASC16-202ENST00000563844 USP17L8P0C7I0 530 aa9.04□□□□□ -0.96
CASC16-202ENST00000563844 PER1O15534 1290 aaPredicted RBP9.03□□□□□ -0.96
CASC16-202ENST00000563844 ARMC2Q8NEN0 867 aa9.03□□□□□ -0.96
CASC16-202ENST00000563844 CD2BP2O95400 341 aaKnown RBP9.02□□□□□ -0.97
CASC16-202ENST00000563844 CCDC24Q8N4L8 307 aa9.02□□□□□ -0.97
CASC16-202ENST00000563844 SLC19A1P41440 591 aa9.01□□□□□ -0.97
CASC16-202ENST00000563844 FLIIQ13045 1269 aa9.01□□□□□ -0.97
CASC16-202ENST00000563844 PLA2G2CQ5R387 149 aa9.01□□□□□ -0.97
CASC16-202ENST00000563844 PNMA1Q8ND90 353 aa9.01□□□□□ -0.97
CASC16-202ENST00000563844 GPKOWQ92917 476 aaPredicted RBP eCLIP9□□□□□ -0.97
CASC16-202ENST00000563844 ZC3H4Q9UPT8 1303 aaKnown RBP9□□□□□ -0.97
CASC16-202ENST00000563844 CTHP32929 405 aa8.99□□□□□ -0.97
CASC16-202ENST00000563844 LIAT1Q6ZQX7 453 aa8.99□□□□□ -0.97
CASC16-202ENST00000563844 LRRN4Q8WUT4 740 aa8.99□□□□□ -0.97
CASC16-202ENST00000563844 PRKD2Q9BZL6 878 aa8.99□□□□□ -0.97
CASC16-202ENST00000563844 UNC93B1Q9H1C4 597 aa8.99□□□□□ -0.97
CASC16-202ENST00000563844 WNT7BP56706 349 aa8.98□□□□□ -0.97
CASC16-202ENST00000563844 TRIM32Q13049 653 aa8.98□□□□□ -0.97
CASC16-202ENST00000563844 SPRYD7Q5W111 196 aa8.98□□□□□ -0.97
CASC16-202ENST00000563844 PTCRAQ6ISU1 281 aaPredicted RBP8.98□□□□□ -0.97
CASC16-202ENST00000563844 EMID1Q96A84 441 aaPredicted RBP8.98□□□□□ -0.97
CASC16-202ENST00000563844 ZNF598Q86UK7 904 aaKnown RBP8.97□□□□□ -0.97
CASC16-202ENST00000563844 PRM3Q9NNZ6 103 aa8.97□□□□□ -0.97
CASC16-202ENST00000563844 MAP10Q9P2G4 905 aa8.97□□□□□ -0.97
CASC16-202ENST00000563844 MCM6Q14566 821 aa8.96□□□□□ -0.98
CASC16-202ENST00000563844 NBPF14Q5TI25 921 aa8.96□□□□□ -0.98
CASC16-202ENST00000563844 MTMR14Q8NCE2 650 aa8.96□□□□□ -0.98
CASC16-202ENST00000563844 GJD4Q96KN9 370 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms