RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 RNF19BQ6ZMZ0 732 aa10.71□□□□□ -0.69
LINC00254-201ENST00000563416 NKX2-3Q8TAU0 364 aa10.71□□□□□ -0.69
LINC00254-201ENST00000563416 A0A0G2JS52 829 aa10.7□□□□□ -0.7
LINC00254-201ENST00000563416 C6orf229H3BNL8 230 aa10.7□□□□□ -0.7
LINC00254-201ENST00000563416 SKIV2LQ15477 1246 aaKnown RBP10.7□□□□□ -0.7
LINC00254-201ENST00000563416 USB1Q9BQ65 265 aaKnown RBP10.7□□□□□ -0.7
LINC00254-201ENST00000563416 SLC6A16Q9GZN6 736 aa10.7□□□□□ -0.7
LINC00254-201ENST00000563416 SPDYE5A6NIY4 337 aa10.69□□□□□ -0.7
LINC00254-201ENST00000563416 TUSC1Q2TAM9 212 aa10.69□□□□□ -0.7
LINC00254-201ENST00000563416 ATP1B4Q9UN42 357 aaPredicted RBP10.69□□□□□ -0.7
LINC00254-201ENST00000563416 PCDHGC3Q9UN70 934 aa10.69□□□□□ -0.7
LINC00254-201ENST00000563416 MTMR2Q13614 643 aa10.68□□□□□ -0.7
LINC00254-201ENST00000563416 MSS51Q4VC12 460 aa10.68□□□□□ -0.7
LINC00254-201ENST00000563416 RETREG3Q86VR2 466 aa10.68□□□□□ -0.7
LINC00254-201ENST00000563416 ZBTB3Q9H5J0 574 aa10.68□□□□□ -0.7
LINC00254-201ENST00000563416 GOPCQ9HD26 462 aa10.68□□□□□ -0.7
LINC00254-201ENST00000563416 POLR3EQ9NVU0 708 aa10.68□□□□□ -0.7
LINC00254-201ENST00000563416 PRPF38BQ5VTL8 546 aaKnown RBP10.67□□□□□ -0.7
LINC00254-201ENST00000563416 PPP1R18Q6NYC8 613 aa10.67□□□□□ -0.7
LINC00254-201ENST00000563416 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.67□□□□□ -0.7
LINC00254-201ENST00000563416 CSPP1Q1MSJ5 1256 aa10.66□□□□□ -0.7
LINC00254-201ENST00000563416 LIMD1Q9UGP4 676 aa10.66□□□□□ -0.7
LINC00254-201ENST00000563416 S1PR4O95977 384 aa10.65□□□□□ -0.7
LINC00254-201ENST00000563416 SYMPKQ92797 1274 aaKnown RBP10.65□□□□□ -0.7
LINC00254-201ENST00000563416 NUTM2BA6NNL0 878 aaPredicted RBP10.64□□□□□ -0.71
LINC00254-201ENST00000563416 NUTM2EB1AL46 878 aaPredicted RBP10.64□□□□□ -0.71
LINC00254-201ENST00000563416 NUTM2DQ5VT03 806 aaPredicted RBP10.64□□□□□ -0.71
LINC00254-201ENST00000563416 NUTM2AQ8IVF1 878 aaPredicted RBP10.64□□□□□ -0.71
LINC00254-201ENST00000563416 PCMTD1Q96MG8 357 aaPredicted RBP10.64□□□□□ -0.71
LINC00254-201ENST00000563416 PCDHB15Q9Y5E8 787 aa10.64□□□□□ -0.71
LINC00254-201ENST00000563416 FAM160A2Q8N612 972 aaPredicted RBP10.63□□□□□ -0.71
LINC00254-201ENST00000563416 HRCP23327 699 aa10.62□□□□□ -0.71
LINC00254-201ENST00000563416 ANKLE1Q8NAG6 615 aa10.61□□□□□ -0.71
LINC00254-201ENST00000563416 RNF223E7ERA6 249 aa10.6□□□□□ -0.71
LINC00254-201ENST00000563416 LILRB3O75022 631 aa10.6□□□□□ -0.71
LINC00254-201ENST00000563416 PRR7Q8TB68 274 aa10.6□□□□□ -0.71
LINC00254-201ENST00000563416 PRDM9Q9NQV7 894 aa10.6□□□□□ -0.71
LINC00254-201ENST00000563416 RGS20O76081 388 aa10.59□□□□□ -0.71
LINC00254-201ENST00000563416 JUNDP17535 347 aa10.59□□□□□ -0.71
LINC00254-201ENST00000563416 MMP16P51512 607 aa10.59□□□□□ -0.71
LINC00254-201ENST00000563416 QPCTQ16769 361 aa10.59□□□□□ -0.71
LINC00254-201ENST00000563416 CABLES1Q8TDN4 633 aa10.59□□□□□ -0.71
LINC00254-201ENST00000563416 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.59□□□□□ -0.71
LINC00254-201ENST00000563416 DXOO77932 396 aaKnown RBP10.58□□□□□ -0.72
LINC00254-201ENST00000563416 DESI1Q6ICB0 168 aa10.58□□□□□ -0.72
LINC00254-201ENST00000563416 PROCA1Q8NCQ7 364 aaPredicted RBP10.58□□□□□ -0.72
LINC00254-201ENST00000563416 HELBQ8NG08 1087 aaPredicted RBP10.57□□□□□ -0.72
LINC00254-201ENST00000563416 PPEF1O14829 653 aaPredicted RBP10.56□□□□□ -0.72
LINC00254-201ENST00000563416 FCF1Q9Y324 198 aaKnown RBP10.56□□□□□ -0.72
LINC00254-201ENST00000563416 TSC1Q92574 1164 aa10.55□□□□□ -0.72
LINC00254-201ENST00000563416 CFAP99D6REC4 459 aa10.54□□□□□ -0.72
LINC00254-201ENST00000563416 PPP2R2DQ66LE6 453 aa10.54□□□□□ -0.72
LINC00254-201ENST00000563416 PTPRNQ16849 979 aa10.53□□□□□ -0.72
LINC00254-201ENST00000563416 RTL5Q5HYW3 569 aaPredicted RBP10.53□□□□□ -0.72
LINC00254-201ENST00000563416 NUDT12Q9BQG2 462 aa10.53□□□□□ -0.72
LINC00254-201ENST00000563416 CCDC24Q8N4L8 307 aa10.52□□□□□ -0.73
LINC00254-201ENST00000563416 ZBTB24O43167 697 aaPredicted RBP10.51□□□□□ -0.73
LINC00254-201ENST00000563416 V9GY48 417 aaPredicted RBP10.51□□□□□ -0.73
LINC00254-201ENST00000563416 CCNYL3P0C7X3 344 aa10.5□□□□□ -0.73
LINC00254-201ENST00000563416 TMEM132AQ24JP5 1023 aa10.5□□□□□ -0.73
LINC00254-201ENST00000563416 PRKD2Q9BZL6 878 aa10.5□□□□□ -0.73
LINC00254-201ENST00000563416 RFC5P40937 340 aa10.49□□□□□ -0.73
LINC00254-201ENST00000563416 LYPD8Q6UX82 237 aa10.49□□□□□ -0.73
LINC00254-201ENST00000563416 SLC19A1P41440 591 aa10.48□□□□□ -0.73
LINC00254-201ENST00000563416 RPIAP49247 311 aa10.48□□□□□ -0.73
LINC00254-201ENST00000563416 TMEM259Q4ZIN3 620 aa10.47□□□□□ -0.73
LINC00254-201ENST00000563416 AP1G2O75843 785 aa10.46□□□□□ -0.73
LINC00254-201ENST00000563416 PLA2G2CQ5R387 149 aa10.46□□□□□ -0.73
LINC00254-201ENST00000563416 EVA1BQ9NVM1 165 aa10.46□□□□□ -0.73
LINC00254-201ENST00000563416 CD2BP2O95400 341 aaKnown RBP10.45□□□□□ -0.74
LINC00254-201ENST00000563416 KCNH2Q12809 1159 aa10.45□□□□□ -0.74
LINC00254-201ENST00000563416 FBXO31Q5XUX0 539 aaPredicted RBP10.45□□□□□ -0.74
LINC00254-201ENST00000563416 CTHP32929 405 aa10.44□□□□□ -0.74
LINC00254-201ENST00000563416 CTDSPL2Q05D32 466 aa10.43□□□□□ -0.74
LINC00254-201ENST00000563416 SPRYD7Q5W111 196 aa10.43□□□□□ -0.74
LINC00254-201ENST00000563416 LIAT1Q6ZQX7 453 aa10.43□□□□□ -0.74
LINC00254-201ENST00000563416 PER1O15534 1290 aaPredicted RBP10.42□□□□□ -0.74
LINC00254-201ENST00000563416 USP17L8P0C7I0 530 aa10.41□□□□□ -0.74
LINC00254-201ENST00000563416 TRIM32Q13049 653 aa10.41□□□□□ -0.74
LINC00254-201ENST00000563416 ZNF598Q86UK7 904 aaKnown RBP10.41□□□□□ -0.74
LINC00254-201ENST00000563416 UNC93B1Q9H1C4 597 aa10.41□□□□□ -0.74
LINC00254-201ENST00000563416 F12P00748 615 aaPredicted RBP10.4□□□□□ -0.74
LINC00254-201ENST00000563416 BANK1Q8NDB2 785 aa10.4□□□□□ -0.74
LINC00254-201ENST00000563416 EMID1Q96A84 441 aaPredicted RBP10.4□□□□□ -0.74
LINC00254-201ENST00000563416 ZNF697Q5TEC3 545 aa10.39□□□□□ -0.75
LINC00254-201ENST00000563416 PTCRAQ6ISU1 281 aaPredicted RBP10.39□□□□□ -0.75
LINC00254-201ENST00000563416 MAP10Q9P2G4 905 aa10.39□□□□□ -0.75
LINC00254-201ENST00000563416 ARMC2Q8NEN0 867 aa10.38□□□□□ -0.75
LINC00254-201ENST00000563416 LRRN4Q8WUT4 740 aa10.37□□□□□ -0.75
LINC00254-201ENST00000563416 NISCHQ9Y2I1 1504 aa10.37□□□□□ -0.75
LINC00254-201ENST00000563416 APBB1O00213 710 aa10.36□□□□□ -0.75
LINC00254-201ENST00000563416 WNT7BP56706 349 aa10.36□□□□□ -0.75
LINC00254-201ENST00000563416 PNMA1Q8ND90 353 aa10.36□□□□□ -0.75
LINC00254-201ENST00000563416 NBPF14Q5TI25 921 aa10.34□□□□□ -0.75
LINC00254-201ENST00000563416 SOCS7O14512 581 aa10.32□□□□□ -0.76
LINC00254-201ENST00000563416 NR6A1Q15406 480 aa10.32□□□□□ -0.76
LINC00254-201ENST00000563416 ZNF511Q8NB15 262 aa10.32□□□□□ -0.76
LINC00254-201ENST00000563416 BAP1Q92560 729 aa10.32□□□□□ -0.76
LINC00254-201ENST00000563416 GPKOWQ92917 476 aaPredicted RBP eCLIP10.32□□□□□ -0.76
LINC00254-201ENST00000563416 LINC01559Q495D7 138 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms