RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 FER1L4A9Z1Z3 1794 aa13.57□□□□□ -0.24
UBFD1-202ENST00000563366 IQGAP1P46940 1657 aa13.56□□□□□ -0.24
UBFD1-202ENST00000563366 ARID4BQ4LE39 1312 aaPredicted RBP13.56□□□□□ -0.24
UBFD1-202ENST00000563366 TMEM131LA2VDJ0 1609 aa13.56□□□□□ -0.24
UBFD1-202ENST00000563366 NRXN1Q9ULB1 1477 aa13.55□□□□□ -0.24
UBFD1-202ENST00000563366 MYO5BQ9ULV0 1848 aa13.55□□□□□ -0.24
UBFD1-202ENST00000563366 SETBP1Q9Y6X0 1596 aa13.54□□□□□ -0.24
UBFD1-202ENST00000563366 NEXMIFQ5QGS0 1516 aa13.54□□□□□ -0.24
UBFD1-202ENST00000563366 NKX1-1Q15270 411 aaPredicted RBP13.53□□□□□ -0.24
UBFD1-202ENST00000563366 PDAP1Q13442 181 aaKnown RBP13.52□□□□□ -0.25
UBFD1-202ENST00000563366 PCDHB8Q9UN66 801 aa13.52□□□□□ -0.25
UBFD1-202ENST00000563366 PCDHB13Q9Y5F0 798 aa13.52□□□□□ -0.25
UBFD1-202ENST00000563366 ZFYVE9O95405 1425 aa13.52□□□□□ -0.25
UBFD1-202ENST00000563366 EIF3AQ14152 1382 aaKnown RBP13.51□□□□□ -0.25
UBFD1-202ENST00000563366 ZNF579Q8NAF0 562 aaKnown RBP13.51□□□□□ -0.25
UBFD1-202ENST00000563366 SCAF11Q99590 1463 aaKnown RBP13.5□□□□□ -0.25
UBFD1-202ENST00000563366 PIK3C2GO75747 1445 aa13.5□□□□□ -0.25
UBFD1-202ENST00000563366 ZMYM3Q14202 1370 aa13.5□□□□□ -0.25
UBFD1-202ENST00000563366 CD44P16070 742 aaKnown RBP13.5□□□□□ -0.25
UBFD1-202ENST00000563366 MLECQ14165 292 aa13.5□□□□□ -0.25
UBFD1-202ENST00000563366 HIRIP3Q9BW71 556 aaPredicted RBP13.5□□□□□ -0.25
UBFD1-202ENST00000563366 TSHZ2Q9NRE2 1034 aa13.5□□□□□ -0.25
UBFD1-202ENST00000563366 ZRANB1Q9UGI0 708 aa13.5□□□□□ -0.25
UBFD1-202ENST00000563366 CCDC7Q96M83 1385 aa13.49□□□□□ -0.25
UBFD1-202ENST00000563366 C3P01024 1663 aa13.49□□□□□ -0.25
UBFD1-202ENST00000563366 WASHC2AQ641Q2 1341 aa13.48□□□□□ -0.25
UBFD1-202ENST00000563366 IDI1Q13907 227 aa13.48□□□□□ -0.25
UBFD1-202ENST00000563366 MYO3AQ8NEV4 1616 aa13.48□□□□□ -0.25
UBFD1-202ENST00000563366 DDX10Q13206 875 aaKnown RBP13.47□□□□□ -0.25
UBFD1-202ENST00000563366 NLRP1Q9C000 1473 aa13.47□□□□□ -0.25
UBFD1-202ENST00000563366 GTPBP6O43824 516 aaPredicted RBP13.46□□□□□ -0.25
UBFD1-202ENST00000563366 KIF12Q96FN5 646 aa13.46□□□□□ -0.25
UBFD1-202ENST00000563366 TNRQ92752 1358 aa13.45□□□□□ -0.26
UBFD1-202ENST00000563366 UBR1Q8IWV7 1749 aa13.45□□□□□ -0.26
UBFD1-202ENST00000563366 MAP3K13O43283 966 aa13.45□□□□□ -0.26
UBFD1-202ENST00000563366 PSEN1P49768 467 aa13.45□□□□□ -0.26
UBFD1-202ENST00000563366 RYDENQ9NUL5 291 aaKnown RBP13.45□□□□□ -0.26
UBFD1-202ENST00000563366 KIF7Q2M1P5 1343 aa13.44□□□□□ -0.26
UBFD1-202ENST00000563366 A2ML1A8K2U0 1454 aa13.44□□□□□ -0.26
UBFD1-202ENST00000563366 NBPF1Q3BBV0 1214 aa13.44□□□□□ -0.26
UBFD1-202ENST00000563366 FBXO31Q5XUX0 539 aaPredicted RBP13.44□□□□□ -0.26
UBFD1-202ENST00000563366 ADGRF5Q8IZF2 1346 aa13.43□□□□□ -0.26
UBFD1-202ENST00000563366 ST20-MTHFSA0A0A6YYL1 179 aa13.43□□□□□ -0.26
UBFD1-202ENST00000563366 IFNL1Q8IU54 200 aa13.43□□□□□ -0.26
UBFD1-202ENST00000563366 ADGRB1O14514 1584 aa13.41□□□□□ -0.26
UBFD1-202ENST00000563366 ADAMTSL3P82987 1691 aa13.41□□□□□ -0.26
UBFD1-202ENST00000563366 RIMS1Q86UR5 1692 aaKnown RBP13.41□□□□□ -0.26
UBFD1-202ENST00000563366 ANP32CO43423 234 aa13.41□□□□□ -0.26
UBFD1-202ENST00000563366 HDGFP51858 240 aaKnown RBP13.41□□□□□ -0.26
UBFD1-202ENST00000563366 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.41□□□□□ -0.26
UBFD1-202ENST00000563366 SBNO2Q9Y2G9 1366 aa13.41□□□□□ -0.26
UBFD1-202ENST00000563366 TMF1P82094 1093 aa13.4□□□□□ -0.26
UBFD1-202ENST00000563366 CDCA8Q53HL2 280 aa13.4□□□□□ -0.26
UBFD1-202ENST00000563366 C14orf93Q9H972 538 aaKnown RBP13.4□□□□□ -0.26
UBFD1-202ENST00000563366 QRICH2Q9H0J4 1663 aa13.4□□□□□ -0.26
UBFD1-202ENST00000563366 ARHGEF28Q8N1W1 1705 aaKnown RBP13.39□□□□□ -0.27
UBFD1-202ENST00000563366 CFAP70Q5T0N1 1121 aa13.39□□□□□ -0.27
UBFD1-202ENST00000563366 PHF12Q96QT6 1004 aa13.39□□□□□ -0.27
UBFD1-202ENST00000563366 RIMS2Q9UQ26 1411 aa13.39□□□□□ -0.27
UBFD1-202ENST00000563366 C11orf95C9JLR9 678 aaPredicted RBP13.37□□□□□ -0.27
UBFD1-202ENST00000563366 ZNF142P52746 1687 aaPredicted RBP13.37□□□□□ -0.27
UBFD1-202ENST00000563366 SETD1AO15047 1707 aaKnown RBP13.36□□□□□ -0.27
UBFD1-202ENST00000563366 ALKQ9UM73 1620 aa13.36□□□□□ -0.27
UBFD1-202ENST00000563366 TESK2Q96S53 571 aa13.36□□□□□ -0.27
UBFD1-202ENST00000563366 C19orf67A6NJJ6 358 aa13.35□□□□□ -0.27
UBFD1-202ENST00000563366 CCER2I3L3R5 266 aa13.35□□□□□ -0.27
UBFD1-202ENST00000563366 SLIT1O75093 1534 aa13.34□□□□□ -0.27
UBFD1-202ENST00000563366 TMEM2Q9UHN6 1383 aa13.33□□□□□ -0.27
UBFD1-202ENST00000563366 KNDC1Q76NI1 1749 aa13.33□□□□□ -0.27
UBFD1-202ENST00000563366 CEP170BQ9Y4F5 1589 aaPredicted RBP13.33□□□□□ -0.28
UBFD1-202ENST00000563366 NRXN3Q9Y4C0 1643 aa13.33□□□□□ -0.28
UBFD1-202ENST00000563366 CENPJQ9HC77 1338 aaPredicted RBP13.33□□□□□ -0.28
UBFD1-202ENST00000563366 ASXL1Q8IXJ9 1541 aa13.33□□□□□ -0.28
UBFD1-202ENST00000563366 KTN1Q86UP2 1357 aaKnown RBP13.32□□□□□ -0.28
UBFD1-202ENST00000563366 DISP3Q9P2K9 1392 aa13.32□□□□□ -0.28
UBFD1-202ENST00000563366 SETD1BQ9UPS6 1966 aaKnown RBP13.32□□□□□ -0.28
UBFD1-202ENST00000563366 DLC1Q96QB1 1528 aa13.32□□□□□ -0.28
UBFD1-202ENST00000563366 MYOM1P52179 1685 aa13.31□□□□□ -0.28
UBFD1-202ENST00000563366 ARHGAP23Q9P227 1491 aa13.31□□□□□ -0.28
UBFD1-202ENST00000563366 BCANQ96GW7 911 aa13.31□□□□□ -0.28
UBFD1-202ENST00000563366 POLR3GLQ9BT43 218 aa13.31□□□□□ -0.28
UBFD1-202ENST00000563366 DIP2AQ14689 1571 aa13.31□□□□□ -0.28
UBFD1-202ENST00000563366 YTHDC2Q9H6S0 1430 aaKnown RBP13.3□□□□□ -0.28
UBFD1-202ENST00000563366 THEMISQ8N1K5 641 aaPredicted RBP13.29□□□□□ -0.28
UBFD1-202ENST00000563366 CABP2Q9NPB3 220 aa13.29□□□□□ -0.28
UBFD1-202ENST00000563366 PLEKHG1Q9ULL1 1385 aa13.29□□□□□ -0.28
UBFD1-202ENST00000563366 NUTM2DQ5VT03 806 aaPredicted RBP13.28□□□□□ -0.28
UBFD1-202ENST00000563366 EID1Q9Y6B2 187 aa13.28□□□□□ -0.28
UBFD1-202ENST00000563366 PTPRMP28827 1452 aa13.28□□□□□ -0.28
UBFD1-202ENST00000563366 CENPBP07199 599 aaPredicted RBP13.27□□□□□ -0.29
UBFD1-202ENST00000563366 CEBPAP49715 358 aaPredicted RBP13.27□□□□□ -0.29
UBFD1-202ENST00000563366 PUS7Q96PZ0 661 aaKnown RBP13.27□□□□□ -0.29
UBFD1-202ENST00000563366 TRAK1Q9UPV9 953 aa13.27□□□□□ -0.29
UBFD1-202ENST00000563366 CPS1P31327 1500 aa13.26□□□□□ -0.29
UBFD1-202ENST00000563366 LRPPRCP42704 1394 aaKnown RBP13.26□□□□□ -0.29
UBFD1-202ENST00000563366 TMEM132EQ6IEE7 984 aa13.26□□□□□ -0.29
UBFD1-202ENST00000563366 PRKRIP1Q9H875 184 aaPredicted RBP13.26□□□□□ -0.29
UBFD1-202ENST00000563366 MS4A3Q96HJ5 214 aa13.25□□□□□ -0.29
UBFD1-202ENST00000563366 TECPR2O15040 1411 aa13.24□□□□□ -0.29
UBFD1-202ENST00000563366 ABCC11Q96J66 1382 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms