RNA–Protein interactions for RNA: ENST00000562847.5

TCF4-217, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-217ENST00000562847 USB1Q9BQ65 265 aaKnown RBP9.58□□□□□ -0.88
TCF4-217ENST00000562847 RSPH6AQ9H0K4 717 aa9.58□□□□□ -0.88
TCF4-217ENST00000562847 RNF223E7ERA6 249 aa9.57□□□□□ -0.88
TCF4-217ENST00000562847 PPEF1O14829 653 aaPredicted RBP9.57□□□□□ -0.88
TCF4-217ENST00000562847 CSPP1Q1MSJ5 1256 aa9.56□□□□□ -0.88
TCF4-217ENST00000562847 SYMPKQ92797 1274 aaKnown RBP9.56□□□□□ -0.88
TCF4-217ENST00000562847 PRKD2Q9BZL6 878 aa9.56□□□□□ -0.88
TCF4-217ENST00000562847 MSS51Q4VC12 460 aa9.55□□□□□ -0.88
TCF4-217ENST00000562847 RSBN1LQ6PCB5 846 aaPredicted RBP9.55□□□□□ -0.88
TCF4-217ENST00000562847 RIC3Q7Z5B4 369 aa9.55□□□□□ -0.88
TCF4-217ENST00000562847 FAM160A2Q8N612 972 aaPredicted RBP9.55□□□□□ -0.88
TCF4-217ENST00000562847 FAM117AQ9C073 453 aa9.55□□□□□ -0.88
TCF4-217ENST00000562847 RETREG3Q86VR2 466 aa9.54□□□□□ -0.88
TCF4-217ENST00000562847 ANKLE1Q8NAG6 615 aa9.54□□□□□ -0.88
TCF4-217ENST00000562847 PRDM9Q9NQV7 894 aa9.54□□□□□ -0.88
TCF4-217ENST00000562847 PCDHGC3Q9UN70 934 aa9.54□□□□□ -0.88
TCF4-217ENST00000562847 MTMR2Q13614 643 aa9.53□□□□□ -0.88
TCF4-217ENST00000562847 MYSM1Q5VVJ2 828 aa9.53□□□□□ -0.88
TCF4-217ENST00000562847 POLR3EQ9NVU0 708 aa9.53□□□□□ -0.88
TCF4-217ENST00000562847 NUTM2BA6NNL0 878 aaPredicted RBP9.52□□□□□ -0.89
TCF4-217ENST00000562847 NUTM2EB1AL46 878 aaPredicted RBP9.52□□□□□ -0.89
TCF4-217ENST00000562847 SPTLC1O15269 473 aa9.52□□□□□ -0.89
TCF4-217ENST00000562847 NUTM2DQ5VT03 806 aaPredicted RBP9.52□□□□□ -0.89
TCF4-217ENST00000562847 NUTM2AQ8IVF1 878 aaPredicted RBP9.52□□□□□ -0.89
TCF4-217ENST00000562847 FCF1Q9Y324 198 aaKnown RBP9.52□□□□□ -0.89
TCF4-217ENST00000562847 SPDYE5A6NIY4 337 aa9.51□□□□□ -0.89
TCF4-217ENST00000562847 GJA5P36382 358 aa9.51□□□□□ -0.89
TCF4-217ENST00000562847 CLK2P49760 499 aaKnown RBP9.51□□□□□ -0.89
TCF4-217ENST00000562847 ZBTB3Q9H5J0 574 aa9.51□□□□□ -0.89
TCF4-217ENST00000562847 SLC19A1P41440 591 aa9.5□□□□□ -0.89
TCF4-217ENST00000562847 BRPF1P55201 1214 aaPredicted RBP9.5□□□□□ -0.89
TCF4-217ENST00000562847 CCDC24Q8N4L8 307 aa9.5□□□□□ -0.89
TCF4-217ENST00000562847 PCDHB15Q9Y5E8 787 aa9.5□□□□□ -0.89
TCF4-217ENST00000562847 ZBTB24O43167 697 aaPredicted RBP9.49□□□□□ -0.89
TCF4-217ENST00000562847 IL27Q8NEV9 243 aa9.49□□□□□ -0.89
TCF4-217ENST00000562847 PRR7Q8TB68 274 aa9.49□□□□□ -0.89
TCF4-217ENST00000562847 TSC1Q92574 1164 aa9.49□□□□□ -0.89
TCF4-217ENST00000562847 LIMD1Q9UGP4 676 aa9.49□□□□□ -0.89
TCF4-217ENST00000562847 V9GY48 417 aaPredicted RBP9.49□□□□□ -0.89
TCF4-217ENST00000562847 JUNDP17535 347 aa9.48□□□□□ -0.89
TCF4-217ENST00000562847 DXOO77932 396 aaKnown RBP9.47□□□□□ -0.89
TCF4-217ENST00000562847 HRCP23327 699 aa9.47□□□□□ -0.89
TCF4-217ENST00000562847 MMP16P51512 607 aa9.47□□□□□ -0.89
TCF4-217ENST00000562847 LAPTM4AQ15012 233 aa9.47□□□□□ -0.89
TCF4-217ENST00000562847 CABLES1Q8TDN4 633 aa9.47□□□□□ -0.89
TCF4-217ENST00000562847 SH3D19Q5HYK7 790 aa9.46□□□□□ -0.9
TCF4-217ENST00000562847 PRPF38BQ5VTL8 546 aaKnown RBP9.46□□□□□ -0.9
TCF4-217ENST00000562847 PLEKHG3A1L390 1219 aa9.45□□□□□ -0.9
TCF4-217ENST00000562847 SKIV2LQ15477 1246 aaKnown RBP9.45□□□□□ -0.9
TCF4-217ENST00000562847 QPCTQ16769 361 aa9.44□□□□□ -0.9
TCF4-217ENST00000562847 PLA2G2CQ5R387 149 aa9.44□□□□□ -0.9
TCF4-217ENST00000562847 NUDT12Q9BQG2 462 aa9.44□□□□□ -0.9
TCF4-217ENST00000562847 CD2BP2O95400 341 aaKnown RBP9.43□□□□□ -0.9
TCF4-217ENST00000562847 TUSC1Q2TAM9 212 aa9.43□□□□□ -0.9
TCF4-217ENST00000562847 LIAT1Q6ZQX7 453 aa9.43□□□□□ -0.9
TCF4-217ENST00000562847 RPIAP49247 311 aa9.42□□□□□ -0.9
TCF4-217ENST00000562847 SPRYD7Q5W111 196 aa9.42□□□□□ -0.9
TCF4-217ENST00000562847 HELBQ8NG08 1087 aaPredicted RBP9.42□□□□□ -0.9
TCF4-217ENST00000562847 PCMTD1Q96MG8 357 aaPredicted RBP9.42□□□□□ -0.9
TCF4-217ENST00000562847 CFAP99D6REC4 459 aa9.41□□□□□ -0.9
TCF4-217ENST00000562847 GFRA3O60609 400 aa9.41□□□□□ -0.9
TCF4-217ENST00000562847 LILRB3O75022 631 aa9.41□□□□□ -0.9
TCF4-217ENST00000562847 CCNYL3P0C7X3 344 aa9.41□□□□□ -0.9
TCF4-217ENST00000562847 ZNF697Q5TEC3 545 aa9.41□□□□□ -0.9
TCF4-217ENST00000562847 Q6ZNB5 142 aa9.41□□□□□ -0.9
TCF4-217ENST00000562847 CTHP32929 405 aa9.4□□□□□ -0.9
TCF4-217ENST00000562847 PTPRNQ16849 979 aa9.4□□□□□ -0.9
TCF4-217ENST00000562847 DESI1Q6ICB0 168 aa9.4□□□□□ -0.9
TCF4-217ENST00000562847 PROCA1Q8NCQ7 364 aaPredicted RBP9.4□□□□□ -0.9
TCF4-217ENST00000562847 ZNF598Q86UK7 904 aaKnown RBP9.39□□□□□ -0.91
TCF4-217ENST00000562847 RTL5Q5HYW3 569 aaPredicted RBP9.38□□□□□ -0.91
TCF4-217ENST00000562847 EMID1Q96A84 441 aaPredicted RBP9.38□□□□□ -0.91
TCF4-217ENST00000562847 FOXC1Q12948 553 aa9.37□□□□□ -0.91
TCF4-217ENST00000562847 PDZRN3Q9UPQ7 1066 aa9.37□□□□□ -0.91
TCF4-217ENST00000562847 NRG2O14511 850 aaPredicted RBP9.36□□□□□ -0.91
TCF4-217ENST00000562847 TRIM32Q13049 653 aa9.36□□□□□ -0.91
TCF4-217ENST00000562847 LYPD8Q6UX82 237 aa9.36□□□□□ -0.91
TCF4-217ENST00000562847 GOPCQ9HD26 462 aa9.36□□□□□ -0.91
TCF4-217ENST00000562847 TNFRSF10AO00220 468 aa9.34□□□□□ -0.91
TCF4-217ENST00000562847 KCNH2Q12809 1159 aa9.34□□□□□ -0.91
TCF4-217ENST00000562847 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.34□□□□□ -0.91
TCF4-217ENST00000562847 EVA1BQ9NVM1 165 aa9.34□□□□□ -0.91
TCF4-217ENST00000562847 AP1G2O75843 785 aa9.33□□□□□ -0.92
TCF4-217ENST00000562847 UNC93B1Q9H1C4 597 aa9.33□□□□□ -0.92
TCF4-217ENST00000562847 PTCRAQ6ISU1 281 aaPredicted RBP9.32□□□□□ -0.92
TCF4-217ENST00000562847 PER1O15534 1290 aaPredicted RBP9.31□□□□□ -0.92
TCF4-217ENST00000562847 PPP2R2DQ66LE6 453 aa9.31□□□□□ -0.92
TCF4-217ENST00000562847 CCDC180Q9P1Z9 1646 aa9.31□□□□□ -0.92
TCF4-217ENST00000562847 CTDSPL2Q05D32 466 aa9.3□□□□□ -0.92
TCF4-217ENST00000562847 LINC01559Q495D7 138 aa9.3□□□□□ -0.92
TCF4-217ENST00000562847 MAP10Q9P2G4 905 aa9.3□□□□□ -0.92
TCF4-217ENST00000562847 ABCC9O60706 1549 aa9.3□□□□□ -0.92
TCF4-217ENST00000562847 WNT7BP56706 349 aa9.29□□□□□ -0.92
TCF4-217ENST00000562847 TRAF7Q6Q0C0 670 aa9.29□□□□□ -0.92
TCF4-217ENST00000562847 CYP4X1Q8N118 509 aa9.29□□□□□ -0.92
TCF4-217ENST00000562847 RFC5P40937 340 aa9.28□□□□□ -0.92
TCF4-217ENST00000562847 TTC24A2A3L6 582 aaPredicted RBP9.27□□□□□ -0.93
TCF4-217ENST00000562847 GDF9O60383 454 aa9.27□□□□□ -0.93
TCF4-217ENST00000562847 AGERQ15109 404 aa9.27□□□□□ -0.93
TCF4-217ENST00000562847 RC3H1Q5TC82 1133 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms