RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 RSPH4AQ5TD94 716 aa8.94□□□□□ -0.98
CDH13-206ENST00000562601 UPF1Q92900 1129 aaKnown RBP eCLIP8.94□□□□□ -0.98
CDH13-206ENST00000562601 A2MP01023 1474 aa8.94□□□□□ -0.98
CDH13-206ENST00000562601 REREQ9P2R6 1566 aa8.94□□□□□ -0.98
CDH13-206ENST00000562601 CEBPAP49715 358 aaPredicted RBP8.93□□□□□ -0.98
CDH13-206ENST00000562601 MAP3K9P80192 1104 aa8.93□□□□□ -0.98
CDH13-206ENST00000562601 MMRN1Q13201 1228 aa8.93□□□□□ -0.98
CDH13-206ENST00000562601 ARSIQ5FYB1 569 aa8.93□□□□□ -0.98
CDH13-206ENST00000562601 GGT6Q6P531 493 aa8.93□□□□□ -0.98
CDH13-206ENST00000562601 CHIC2Q9UKJ5 165 aa8.93□□□□□ -0.98
CDH13-206ENST00000562601 RTEL1-TNFRSF6BF6WH68 1400 aa8.92□□□□□ -0.98
CDH13-206ENST00000562601 EMP3P54852 163 aa8.92□□□□□ -0.98
CDH13-206ENST00000562601 CROCC2H7BZ55 1655 aa8.91□□□□□ -0.98
CDH13-206ENST00000562601 PLXNC1O60486 1568 aa8.91□□□□□ -0.98
CDH13-206ENST00000562601 AGLP35573 1532 aa8.91□□□□□ -0.98
CDH13-206ENST00000562601 TCOF1Q13428 1488 aaKnown RBP8.91□□□□□ -0.98
CDH13-206ENST00000562601 ABCC5O15440 1437 aa8.91□□□□□ -0.98
CDH13-206ENST00000562601 KRTAP3-3Q9BYR6 98 aa8.91□□□□□ -0.98
CDH13-206ENST00000562601 KRTAP3-2Q9BYR7 98 aa8.91□□□□□ -0.98
CDH13-206ENST00000562601 ESF1Q9H501 851 aaKnown RBP8.91□□□□□ -0.98
CDH13-206ENST00000562601 EMILIN3Q9NT22 766 aa8.91□□□□□ -0.98
CDH13-206ENST00000562601 DAPK1P53355 1430 aa8.9□□□□□ -0.98
CDH13-206ENST00000562601 DHX29Q7Z478 1369 aaKnown RBP8.9□□□□□ -0.98
CDH13-206ENST00000562601 KIF3BO15066 747 aa8.9□□□□□ -0.98
CDH13-206ENST00000562601 ITGAEP38570 1179 aa8.9□□□□□ -0.98
CDH13-206ENST00000562601 RRP7BPQ9NSQ0 103 aa8.9□□□□□ -0.98
CDH13-206ENST00000562601 CLTCQ00610 1675 aaKnown RBP8.9□□□□□ -0.98
CDH13-206ENST00000562601 DNMT1P26358 1616 aaKnown RBP8.9□□□□□ -0.99
CDH13-206ENST00000562601 MAST1Q9Y2H9 1570 aa8.9□□□□□ -0.99
CDH13-206ENST00000562601 NUDT7P0C024 238 aa8.89□□□□□ -0.99
CDH13-206ENST00000562601 ARIH1Q9Y4X5 557 aaPredicted RBP8.89□□□□□ -0.99
CDH13-206ENST00000562601 C3P01024 1663 aa8.88□□□□□ -0.99
CDH13-206ENST00000562601 ERBB3P21860 1342 aa8.87□□□□□ -0.99
CDH13-206ENST00000562601 PSDA5PKW4 1024 aaPredicted RBP8.87□□□□□ -0.99
CDH13-206ENST00000562601 KHSRPQ92945 711 aaKnown RBP eCLIP8.87□□□□□ -0.99
CDH13-206ENST00000562601 KDM2AQ9Y2K7 1162 aa8.87□□□□□ -0.99
CDH13-206ENST00000562601 SHANK2Q9UPX8 1470 aa8.86□□□□□ -0.99
CDH13-206ENST00000562601 SPDYE16A6NNV3 312 aaPredicted RBP8.86□□□□□ -0.99
CDH13-206ENST00000562601 DPYSL4O14531 572 aa8.86□□□□□ -0.99
CDH13-206ENST00000562601 EVI5O60447 810 aa8.86□□□□□ -0.99
CDH13-206ENST00000562601 ARHGEF1Q92888 912 aaKnown RBP8.86□□□□□ -0.99
CDH13-206ENST00000562601 HS3ST6Q96QI5 342 aa8.86□□□□□ -0.99
CDH13-206ENST00000562601 PTPRKQ15262 1439 aa8.86□□□□□ -0.99
CDH13-206ENST00000562601 CFAP65Q6ZU64 1925 aaKnown RBP8.86□□□□□ -0.99
CDH13-206ENST00000562601 KIF15Q9NS87 1388 aa8.86□□□□□ -0.99
CDH13-206ENST00000562601 HSPA2P54652 639 aa8.85□□□□□ -0.99
CDH13-206ENST00000562601 KCNV2Q8TDN2 545 aa8.85□□□□□ -0.99
CDH13-206ENST00000562601 ZMYM3Q14202 1370 aa8.85□□□□□ -0.99
CDH13-206ENST00000562601 DUOX2Q9NRD8 1548 aa8.85□□□□□ -0.99
CDH13-206ENST00000562601 WASHC2CQ9Y4E1 1318 aa8.84□□□□□ -0.99
CDH13-206ENST00000562601 SLC24A1O60721 1099 aa8.84□□□□□ -0.99
CDH13-206ENST00000562601 MROH2AA6NES4 1674 aa8.84□□□□□ -0.99
CDH13-206ENST00000562601 ANKRD30AQ9BXX3 1397 aa8.84□□□□□ -0.99
CDH13-206ENST00000562601 CEP152O94986 1710 aa8.83□□□□□ -1
CDH13-206ENST00000562601 NCOA1Q15788 1441 aa8.83□□□□□ -1
CDH13-206ENST00000562601 CNTLNQ9NXG0 1405 aa8.83□□□□□ -1
CDH13-206ENST00000562601 FAM205CA6NFA0 338 aa8.83□□□□□ -1
CDH13-206ENST00000562601 PDIA6Q15084 440 aa8.83□□□□□ -1
CDH13-206ENST00000562601 ANO8Q9HCE9 1232 aaPredicted RBP8.83□□□□□ -1
CDH13-206ENST00000562601 LHX6Q9UPM6 363 aa8.83□□□□□ -1
CDH13-206ENST00000562601 PREX1Q8TCU6 1659 aa8.83□□□□□ -1
CDH13-206ENST00000562601 EIF2AK4Q9P2K8 1649 aaKnown RBP8.83□□□□□ -1
CDH13-206ENST00000562601 LMTK3Q96Q04 1460 aa8.83□□□□□ -1
CDH13-206ENST00000562601 SETD1BQ9UPS6 1966 aaKnown RBP8.82□□□□□ -1
CDH13-206ENST00000562601 VARS2Q5ST30 1063 aaKnown RBP8.82□□□□□ -1
CDH13-206ENST00000562601 FBXO31Q5XUX0 539 aaPredicted RBP8.82□□□□□ -1
CDH13-206ENST00000562601 RNF17Q9BXT8 1623 aaKnown RBP8.82□□□□□ -1
CDH13-206ENST00000562601 KDM5DQ9BY66 1539 aa8.81□□□□□ -1
CDH13-206ENST00000562601 MROH1Q8NDA8 1641 aa8.81□□□□□ -1
CDH13-206ENST00000562601 ADGRL2O95490 1459 aa8.81□□□□□ -1
CDH13-206ENST00000562601 ERBINQ96RT1 1412 aa8.8□□□□□ -1
CDH13-206ENST00000562601 RRBP1Q9P2E9 1410 aaKnown RBP8.8□□□□□ -1
CDH13-206ENST00000562601 PPP4R3BQ5MIZ7 849 aa8.8□□□□□ -1
CDH13-206ENST00000562601 ABCC3O15438 1527 aa8.8□□□□□ -1
CDH13-206ENST00000562601 UHRF1BP1Q6BDS2 1440 aa8.79□□□□□ -1
CDH13-206ENST00000562601 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.78□□□□□ -1
CDH13-206ENST00000562601 PTGER2P43116 358 aa8.78□□□□□ -1
CDH13-206ENST00000562601 DEPDC5O75140 1603 aa8.78□□□□□ -1
CDH13-206ENST00000562601 CAMSAP1Q5T5Y3 1602 aa8.78□□□□□ -1
CDH13-206ENST00000562601 ANKRD50Q9ULJ7 1429 aa8.78□□□□□ -1
CDH13-206ENST00000562601 ZC3H13Q5T200 1668 aaKnown RBP8.78□□□□□ -1
CDH13-206ENST00000562601 MYO3AQ8NEV4 1616 aa8.77□□□□□ -1.01
CDH13-206ENST00000562601 ZNF454Q8N9F8 522 aa8.77□□□□□ -1.01
CDH13-206ENST00000562601 NPATQ14207 1427 aa8.77□□□□□ -1.01
CDH13-206ENST00000562601 PZPP20742 1482 aa8.77□□□□□ -1.01
CDH13-206ENST00000562601 ROCK1Q13464 1354 aa8.76□□□□□ -1.01
CDH13-206ENST00000562601 KANK1Q14678 1352 aa8.76□□□□□ -1.01
CDH13-206ENST00000562601 PRDM15P57071 1507 aaPredicted RBP8.76□□□□□ -1.01
CDH13-206ENST00000562601 PHF14O94880 888 aa8.76□□□□□ -1.01
CDH13-206ENST00000562601 ZNF687Q8N1G0 1237 aa8.76□□□□□ -1.01
CDH13-206ENST00000562601 EPAS1Q99814 870 aa8.76□□□□□ -1.01
CDH13-206ENST00000562601 STRCQ7RTU9 1775 aa8.76□□□□□ -1.01
CDH13-206ENST00000562601 TNRQ92752 1358 aa8.75□□□□□ -1.01
CDH13-206ENST00000562601 FOSBP53539 338 aa8.75□□□□□ -1.01
CDH13-206ENST00000562601 FBXW7Q969H0 707 aa8.75□□□□□ -1.01
CDH13-206ENST00000562601 FAM135AQ9P2D6 1515 aa8.75□□□□□ -1.01
CDH13-206ENST00000562601 PBX2P40425 430 aa8.74□□□□□ -1.01
CDH13-206ENST00000562601 VWDEQ8N2E2 1590 aa8.73□□□□□ -1.01
CDH13-206ENST00000562601 CEP170BQ9Y4F5 1589 aaPredicted RBP8.73□□□□□ -1.01
CDH13-206ENST00000562601 ZNF142P52746 1687 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms