RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 USP32Q8NFA0 1604 aa22.41■■□□□ 1.18
PKD1-225ENST00000562297 ADAMTSL3P82987 1691 aa22.4■■□□□ 1.18
PKD1-225ENST00000562297 ADAMTS13Q76LX8 1427 aa22.39■■□□□ 1.18
PKD1-225ENST00000562297 LTKP29376 864 aa22.39■■□□□ 1.17
PKD1-225ENST00000562297 POGKQ9P215 609 aa22.39■■□□□ 1.17
PKD1-225ENST00000562297 PLEKHG1Q9ULL1 1385 aa22.38■■□□□ 1.17
PKD1-225ENST00000562297 CABP2Q9NPB3 220 aa22.38■■□□□ 1.17
PKD1-225ENST00000562297 TECPR2O15040 1411 aa22.38■■□□□ 1.17
PKD1-225ENST00000562297 MINK1Q8N4C8 1332 aaPredicted RBP22.37■■□□□ 1.17
PKD1-225ENST00000562297 PPP2R1AP30153 589 aa22.37■■□□□ 1.17
PKD1-225ENST00000562297 NSD3Q9BZ95 1437 aa22.37■■□□□ 1.17
PKD1-225ENST00000562297 CPS1P31327 1500 aa22.36■■□□□ 1.17
PKD1-225ENST00000562297 PLEKHH1Q9ULM0 1364 aa22.36■■□□□ 1.17
PKD1-225ENST00000562297 MED14O60244 1454 aa22.36■■□□□ 1.17
PKD1-225ENST00000562297 ANKRD36BQ8N2N9 1353 aa22.35■■□□□ 1.17
PKD1-225ENST00000562297 NINLQ9Y2I6 1382 aa22.35■■□□□ 1.17
PKD1-225ENST00000562297 PLPPR3Q6T4P5 718 aa22.34■■□□□ 1.17
PKD1-225ENST00000562297 WAPLQ7Z5K2 1190 aa22.34■■□□□ 1.17
PKD1-225ENST00000562297 ATAD2Q6PL18 1390 aa22.33■■□□□ 1.16
PKD1-225ENST00000562297 FAM135BQ49AJ0 1406 aa22.33■■□□□ 1.16
PKD1-225ENST00000562297 CEP170BQ9Y4F5 1589 aaPredicted RBP22.32■■□□□ 1.16
PKD1-225ENST00000562297 TXNDC2Q86VQ3 553 aa22.32■■□□□ 1.16
PKD1-225ENST00000562297 SRPK2P78362 688 aaKnown RBP22.31■■□□□ 1.16
PKD1-225ENST00000562297 SIRT1Q96EB6 747 aa22.31■■□□□ 1.16
PKD1-225ENST00000562297 INSRP06213 1382 aa22.31■■□□□ 1.16
PKD1-225ENST00000562297 CD163L1Q9NR16 1453 aa22.3■■□□□ 1.16
PKD1-225ENST00000562297 THEMISQ8N1K5 641 aaPredicted RBP22.3■■□□□ 1.16
PKD1-225ENST00000562297 CDK19Q9BWU1 502 aa22.29■■□□□ 1.16
PKD1-225ENST00000562297 ZNF142P52746 1687 aaPredicted RBP22.29■■□□□ 1.16
PKD1-225ENST00000562297 A0A1W2PP64 1363 aa22.29■■□□□ 1.16
PKD1-225ENST00000562297 EID1Q9Y6B2 187 aa22.28■■□□□ 1.16
PKD1-225ENST00000562297 SETD1BQ9UPS6 1966 aaKnown RBP22.28■■□□□ 1.16
PKD1-225ENST00000562297 BCANQ96GW7 911 aa22.27■■□□□ 1.16
PKD1-225ENST00000562297 BLMP54132 1417 aaPredicted RBP22.27■■□□□ 1.16
PKD1-225ENST00000562297 CGNL1Q0VF96 1302 aa22.25■■□□□ 1.15
PKD1-225ENST00000562297 ROBO2Q9HCK4 1378 aa22.25■■□□□ 1.15
PKD1-225ENST00000562297 DIP2AQ14689 1571 aa22.24■■□□□ 1.15
PKD1-225ENST00000562297 PTPRUQ92729 1446 aa22.24■■□□□ 1.15
PKD1-225ENST00000562297 NSD2O96028 1365 aa22.23■■□□□ 1.15
PKD1-225ENST00000562297 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.22■■□□□ 1.15
PKD1-225ENST00000562297 SLC26A8Q96RN1 970 aa22.22■■□□□ 1.15
PKD1-225ENST00000562297 ADGRB2O60241 1585 aa22.22■■□□□ 1.15
PKD1-225ENST00000562297 ANKRD26Q9UPS8 1709 aa22.22■■□□□ 1.15
PKD1-225ENST00000562297 WASLO00401 505 aaPredicted RBP22.21■■□□□ 1.15
PKD1-225ENST00000562297 TBX22Q9Y458 520 aa22.21■■□□□ 1.15
PKD1-225ENST00000562297 SUPT16HQ9Y5B9 1047 aaKnown RBP22.21■■□□□ 1.15
PKD1-225ENST00000562297 TERF2IPQ9NYB0 399 aa22.2■■□□□ 1.14
PKD1-225ENST00000562297 ATP7BP35670 1465 aa22.19■■□□□ 1.14
PKD1-225ENST00000562297 MORC1Q86VD1 984 aa22.19■■□□□ 1.14
PKD1-225ENST00000562297 CABP1Q9NZU7 370 aa22.19■■□□□ 1.14
PKD1-225ENST00000562297 ADAMTS8Q9UP79 889 aa22.19■■□□□ 1.14
PKD1-225ENST00000562297 SENP3-EIF4A1A0A087X0R7 540 aa22.18■■□□□ 1.14
PKD1-225ENST00000562297 SMG6Q86US8 1419 aaKnown RBP22.18■■□□□ 1.14
PKD1-225ENST00000562297 XRN1Q8IZH2 1706 aaKnown RBP22.18■■□□□ 1.14
PKD1-225ENST00000562297 KIF20BQ96Q89 1820 aa22.17■■□□□ 1.14
PKD1-225ENST00000562297 POLR3AO14802 1390 aaPredicted RBP22.17■■□□□ 1.14
PKD1-225ENST00000562297 SHPRHQ149N8 1683 aa22.16■■□□□ 1.14
PKD1-225ENST00000562297 PTCH1Q13635 1447 aa22.16■■□□□ 1.14
PKD1-225ENST00000562297 CPSF1Q10570 1443 aaKnown RBP22.14■■□□□ 1.13
PKD1-225ENST00000562297 WDR43Q15061 677 aaKnown RBP eCLIP22.13■■□□□ 1.13
PKD1-225ENST00000562297 HDGFL2Q7Z4V5 671 aaPredicted RBP22.13■■□□□ 1.13
PKD1-225ENST00000562297 PPIP5K1Q6PFW1 1433 aa22.13■■□□□ 1.13
PKD1-225ENST00000562297 AMOTL2Q9Y2J4 779 aa22.13■■□□□ 1.13
PKD1-225ENST00000562297 AKAP12Q02952 1782 aa22.13■■□□□ 1.13
PKD1-225ENST00000562297 MON2Q7Z3U7 1717 aa22.12■■□□□ 1.13
PKD1-225ENST00000562297 TOPAZ1Q8N9V7 1692 aa22.12■■□□□ 1.13
PKD1-225ENST00000562297 CDC42BPGQ6DT37 1551 aa22.12■■□□□ 1.13
PKD1-225ENST00000562297 FYB1O15117 783 aa22.12■■□□□ 1.13
PKD1-225ENST00000562297 NUDT16Q96DE0 195 aaKnown RBP22.11■■□□□ 1.13
PKD1-225ENST00000562297 TNNT2P45379 298 aaPredicted RBP22.11■■□□□ 1.13
PKD1-225ENST00000562297 FKBP8Q14318 412 aa22.11■■□□□ 1.13
PKD1-225ENST00000562297 NUDCQ9Y266 331 aa22.11■■□□□ 1.13
PKD1-225ENST00000562297 PRR36Q9H6K5 1346 aa22.1■■□□□ 1.13
PKD1-225ENST00000562297 PIK3R4Q99570 1358 aa22.1■■□□□ 1.13
PKD1-225ENST00000562297 ITSN1Q15811 1721 aa22.1■■□□□ 1.13
PKD1-225ENST00000562297 CCDC61Q9Y6R9 512 aa22.09■■□□□ 1.13
PKD1-225ENST00000562297 CHD2O14647 1828 aaKnown RBP22.09■■□□□ 1.13
PKD1-225ENST00000562297 GGNBP2Q9H3C7 697 aa22.08■■□□□ 1.13
PKD1-225ENST00000562297 NCKAP5LQ9HCH0 1330 aa22.07■■□□□ 1.12
PKD1-225ENST00000562297 NEFLP07196 543 aa22.07■■□□□ 1.12
PKD1-225ENST00000562297 MTHFSP49914 203 aa22.07■■□□□ 1.12
PKD1-225ENST00000562297 ANKLE2Q86XL3 938 aa22.07■■□□□ 1.12
PKD1-225ENST00000562297 EDC4Q6P2E9 1401 aaKnown RBP22.06■■□□□ 1.12
PKD1-225ENST00000562297 SALL2Q9Y467 1007 aaPredicted RBP22.05■■□□□ 1.12
PKD1-225ENST00000562297 PDE3BQ13370 1112 aa22.04■■□□□ 1.12
PKD1-225ENST00000562297 RGPD8O14715 1765 aaPredicted RBP22.02■■□□□ 1.12
PKD1-225ENST00000562297 NRKQ7Z2Y5 1582 aa22.01■■□□□ 1.11
PKD1-225ENST00000562297 KCNA6P17658 529 aa22.01■■□□□ 1.11
PKD1-225ENST00000562297 COL3A1P02461 1466 aaPredicted RBP22.01■■□□□ 1.11
PKD1-225ENST00000562297 NKTRP30414 1462 aaKnown RBP22■■□□□ 1.11
PKD1-225ENST00000562297 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22■■□□□ 1.11
PKD1-225ENST00000562297 ZNF521Q96K83 1311 aa22■■□□□ 1.11
PKD1-225ENST00000562297 CCDC146Q8IYE0 955 aa21.99■■□□□ 1.11
PKD1-225ENST00000562297 MAP2P11137 1827 aaKnown RBP21.99■■□□□ 1.11
PKD1-225ENST00000562297 RNF123Q5XPI4 1314 aa21.98■■□□□ 1.11
PKD1-225ENST00000562297 PLEKHG3A1L390 1219 aa21.98■■□□□ 1.11
PKD1-225ENST00000562297 CDCA7LQ96GN5 454 aa21.98■■□□□ 1.11
PKD1-225ENST00000562297 CFAP53Q96M91 514 aa21.98■■□□□ 1.11
PKD1-225ENST00000562297 ZNF692Q9BU19 519 aaPredicted RBP21.97■■□□□ 1.11
PKD1-225ENST00000562297 NPHP4O75161 1426 aaPredicted RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms