RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 EIF5BO60841 1220 aaKnown RBP17.82■□□□□ 0.44
VPS9D1-202ENST00000561976 RWDD1Q9H446 243 aaPredicted RBP17.82■□□□□ 0.44
VPS9D1-202ENST00000561976 SLC12A5Q9H2X9 1139 aa17.82■□□□□ 0.44
VPS9D1-202ENST00000561976 WDR63Q8IWG1 891 aa17.81■□□□□ 0.44
VPS9D1-202ENST00000561976 TRAK1Q9UPV9 953 aa17.81■□□□□ 0.44
VPS9D1-202ENST00000561976 FAM43AQ8N2R8 423 aa17.81■□□□□ 0.44
VPS9D1-202ENST00000561976 TBC1D32Q96NH3 1257 aa17.81■□□□□ 0.44
VPS9D1-202ENST00000561976 MYOM2P54296 1465 aa17.8■□□□□ 0.44
VPS9D1-202ENST00000561976 NLRP1Q9C000 1473 aa17.8■□□□□ 0.44
VPS9D1-202ENST00000561976 DEPDC5O75140 1603 aa17.8■□□□□ 0.44
VPS9D1-202ENST00000561976 CFAP53Q96M91 514 aa17.8■□□□□ 0.44
VPS9D1-202ENST00000561976 MTHFSP49914 203 aa17.79■□□□□ 0.44
VPS9D1-202ENST00000561976 TBC1D2Q9BYX2 928 aa17.79■□□□□ 0.44
VPS9D1-202ENST00000561976 SPRYD3Q8NCJ5 442 aa17.79■□□□□ 0.44
VPS9D1-202ENST00000561976 ANTXR1Q9H6X2 564 aa17.78■□□□□ 0.44
VPS9D1-202ENST00000561976 MYH16Q9H6N6 1097 aa17.78■□□□□ 0.44
VPS9D1-202ENST00000561976 L1TD1Q5T7N2 865 aaKnown RBP17.77■□□□□ 0.44
VPS9D1-202ENST00000561976 SBNO2Q9Y2G9 1366 aa17.77■□□□□ 0.44
VPS9D1-202ENST00000561976 FTSJ3Q8IY81 847 aaKnown RBP17.77■□□□□ 0.43
VPS9D1-202ENST00000561976 ATP7AQ04656 1500 aa17.77■□□□□ 0.43
VPS9D1-202ENST00000561976 ARXQ96QS3 562 aa17.76■□□□□ 0.43
VPS9D1-202ENST00000561976 PHF23Q9BUL5 403 aaPredicted RBP17.76■□□□□ 0.43
VPS9D1-202ENST00000561976 SHPRHQ149N8 1683 aa17.75■□□□□ 0.43
VPS9D1-202ENST00000561976 U2AF1L5P0DN76 240 aaPredicted RBP17.75■□□□□ 0.43
VPS9D1-202ENST00000561976 U2AF1Q01081 240 aaKnown RBP eCLIP17.75■□□□□ 0.43
VPS9D1-202ENST00000561976 MVPQ14764 893 aaKnown RBP17.75■□□□□ 0.43
VPS9D1-202ENST00000561976 KIF1BO60333 1816 aa17.75■□□□□ 0.43
VPS9D1-202ENST00000561976 NOS1P29475 1434 aa17.75■□□□□ 0.43
VPS9D1-202ENST00000561976 VWDEQ8N2E2 1590 aa17.75■□□□□ 0.43
VPS9D1-202ENST00000561976 NEURL4Q96JN8 1562 aa17.75■□□□□ 0.43
VPS9D1-202ENST00000561976 ZMYM3Q14202 1370 aa17.74■□□□□ 0.43
VPS9D1-202ENST00000561976 IQSEC2Q5JU85 1478 aa17.74■□□□□ 0.43
VPS9D1-202ENST00000561976 CCDC27Q2M243 656 aa17.74■□□□□ 0.43
VPS9D1-202ENST00000561976 ZKSCAN2Q63HK3 967 aa17.74■□□□□ 0.43
VPS9D1-202ENST00000561976 TMEM132EQ6IEE7 984 aa17.73■□□□□ 0.43
VPS9D1-202ENST00000561976 DZIP1LQ8IYY4 767 aaKnown RBP17.73■□□□□ 0.43
VPS9D1-202ENST00000561976 MFAP1P55081 439 aaKnown RBP17.72■□□□□ 0.43
VPS9D1-202ENST00000561976 UHRF1BP1LA0JNW5 1464 aa17.72■□□□□ 0.43
VPS9D1-202ENST00000561976 FANCAO15360 1455 aa17.72■□□□□ 0.43
VPS9D1-202ENST00000561976 MYO3AQ8NEV4 1616 aa17.71■□□□□ 0.43
VPS9D1-202ENST00000561976 RSPH6AQ9H0K4 717 aa17.71■□□□□ 0.43
VPS9D1-202ENST00000561976 ZNF518AQ6AHZ1 1483 aa17.71■□□□□ 0.42
VPS9D1-202ENST00000561976 ARAP3Q8WWN8 1544 aa17.7■□□□□ 0.42
VPS9D1-202ENST00000561976 TSR2Q969E8 191 aaKnown RBP17.7■□□□□ 0.42
VPS9D1-202ENST00000561976 C22orf23Q9BZE7 217 aa17.7■□□□□ 0.42
VPS9D1-202ENST00000561976 SMC4Q9NTJ3 1288 aa17.7■□□□□ 0.42
VPS9D1-202ENST00000561976 INO80Q9ULG1 1556 aaPredicted RBP17.7■□□□□ 0.42
VPS9D1-202ENST00000561976 GZF1Q9H116 711 aaPredicted RBP17.69■□□□□ 0.42
VPS9D1-202ENST00000561976 MROH2AA6NES4 1674 aa17.69■□□□□ 0.42
VPS9D1-202ENST00000561976 NRXN1Q9ULB1 1477 aa17.69■□□□□ 0.42
VPS9D1-202ENST00000561976 C14orf93Q9H972 538 aaKnown RBP17.68■□□□□ 0.42
VPS9D1-202ENST00000561976 GOLGA6L3A6NEY3 463 aa17.68■□□□□ 0.42
VPS9D1-202ENST00000561976 MCM4P33991 863 aa17.68■□□□□ 0.42
VPS9D1-202ENST00000561976 ADGRL1O94910 1474 aa17.68■□□□□ 0.42
VPS9D1-202ENST00000561976 IFT172Q9UG01 1749 aa17.68■□□□□ 0.42
VPS9D1-202ENST00000561976 ITPRIPQ8IWB1 547 aa17.68■□□□□ 0.42
VPS9D1-202ENST00000561976 EFCAB6Q5THR3 1501 aa17.67■□□□□ 0.42
VPS9D1-202ENST00000561976 MROH1Q8NDA8 1641 aa17.67■□□□□ 0.42
VPS9D1-202ENST00000561976 U2SURPO15042 1029 aaKnown RBP17.67■□□□□ 0.42
VPS9D1-202ENST00000561976 EXOSC9Q06265 439 aaKnown RBP17.67■□□□□ 0.42
VPS9D1-202ENST00000561976 CHMP5Q9NZZ3 219 aa17.66■□□□□ 0.42
VPS9D1-202ENST00000561976 SETBP1Q9Y6X0 1596 aa17.66■□□□□ 0.42
VPS9D1-202ENST00000561976 QRICH2Q9H0J4 1663 aa17.65■□□□□ 0.42
VPS9D1-202ENST00000561976 RRAGDQ9NQL2 400 aaPredicted RBP17.65■□□□□ 0.42
VPS9D1-202ENST00000561976 DDX19BQ9UMR2 479 aa17.65■□□□□ 0.42
VPS9D1-202ENST00000561976 CT47B1P0C2W7 299 aaPredicted RBP17.64■□□□□ 0.41
VPS9D1-202ENST00000561976 TRIM27P14373 513 aa17.64■□□□□ 0.41
VPS9D1-202ENST00000561976 EVC2Q86UK5 1308 aa17.64■□□□□ 0.41
VPS9D1-202ENST00000561976 XRCC6P12956 609 aaKnown RBP eCLIP17.63■□□□□ 0.41
VPS9D1-202ENST00000561976 HSCBQ8IWL3 235 aa17.63■□□□□ 0.41
VPS9D1-202ENST00000561976 PPRC1Q5VV67 1664 aaKnown RBP17.63■□□□□ 0.41
VPS9D1-202ENST00000561976 NCBP3Q53F19 620 aaKnown RBP17.63■□□□□ 0.41
VPS9D1-202ENST00000561976 SSH1Q8WYL5 1049 aa17.63■□□□□ 0.41
VPS9D1-202ENST00000561976 HDAC1Q13547 482 aaPredicted RBP17.62■□□□□ 0.41
VPS9D1-202ENST00000561976 NUTM2DQ5VT03 806 aaPredicted RBP17.62■□□□□ 0.41
VPS9D1-202ENST00000561976 UBE2Q2Q8WVN8 375 aa17.62■□□□□ 0.41
VPS9D1-202ENST00000561976 ADGRB3O60242 1522 aa17.62■□□□□ 0.41
VPS9D1-202ENST00000561976 ATF7IPQ6VMQ6 1270 aa17.62■□□□□ 0.41
VPS9D1-202ENST00000561976 CABP2Q9NPB3 220 aa17.62■□□□□ 0.41
VPS9D1-202ENST00000561976 TRAK2O60296 914 aa17.62■□□□□ 0.41
VPS9D1-202ENST00000561976 SAFB2Q14151 953 aaKnown RBP eCLIP17.62■□□□□ 0.41
VPS9D1-202ENST00000561976 GGT6Q6P531 493 aa17.62■□□□□ 0.41
VPS9D1-202ENST00000561976 ANKRD36BQ8N2N9 1353 aa17.61■□□□□ 0.41
VPS9D1-202ENST00000561976 NOB1Q9ULX3 412 aaKnown RBP17.61■□□□□ 0.41
VPS9D1-202ENST00000561976 ABCA9Q8IUA7 1624 aa17.61■□□□□ 0.41
VPS9D1-202ENST00000561976 TMPOP42166 694 aaKnown RBP17.61■□□□□ 0.41
VPS9D1-202ENST00000561976 NSD2O96028 1365 aa17.6■□□□□ 0.41
VPS9D1-202ENST00000561976 ZC3H13Q5T200 1668 aaKnown RBP17.6■□□□□ 0.41
VPS9D1-202ENST00000561976 USP32Q8NFA0 1604 aa17.6■□□□□ 0.41
VPS9D1-202ENST00000561976 CFAP65Q6ZU64 1925 aaKnown RBP17.6■□□□□ 0.41
VPS9D1-202ENST00000561976 PANK2Q9BZ23 570 aa17.59■□□□□ 0.41
VPS9D1-202ENST00000561976 ADGRB1O14514 1584 aa17.59■□□□□ 0.41
VPS9D1-202ENST00000561976 FSD2A1L4K1 749 aa17.59■□□□□ 0.41
VPS9D1-202ENST00000561976 TMEM57Q8N5G2 664 aa17.59■□□□□ 0.41
VPS9D1-202ENST00000561976 SMC5Q8IY18 1101 aa17.58■□□□□ 0.4
VPS9D1-202ENST00000561976 GGNBP2Q9H3C7 697 aa17.58■□□□□ 0.4
VPS9D1-202ENST00000561976 TRIM35Q9UPQ4 493 aa17.58■□□□□ 0.4
VPS9D1-202ENST00000561976 RPGRIP1LQ68CZ1 1315 aa17.57■□□□□ 0.4
VPS9D1-202ENST00000561976 SENP3Q9H4L4 574 aaPredicted RBP17.57■□□□□ 0.4
VPS9D1-202ENST00000561976 PLEKHF1Q96S99 279 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms