RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 ARID4BQ4LE39 1312 aaPredicted RBP9.43□□□□□ -0.9
CDH1-203ENST00000561751 ZNF326Q5BKZ1 582 aaKnown RBP9.43□□□□□ -0.9
CDH1-203ENST00000561751 BCL2L12Q9HB09 334 aa9.43□□□□□ -0.9
CDH1-203ENST00000561751 NCOA1Q15788 1441 aa9.42□□□□□ -0.9
CDH1-203ENST00000561751 KTN1Q86UP2 1357 aaKnown RBP9.42□□□□□ -0.9
CDH1-203ENST00000561751 SMAP1Q8IYB5 467 aaPredicted RBP9.42□□□□□ -0.9
CDH1-203ENST00000561751 NAP1L5Q96NT1 182 aaPredicted RBP9.42□□□□□ -0.9
CDH1-203ENST00000561751 SIN3AQ96ST3 1273 aa9.42□□□□□ -0.9
CDH1-203ENST00000561751 VPS9D1Q9Y2B5 631 aa9.42□□□□□ -0.9
CDH1-203ENST00000561751 HECW2Q9P2P5 1572 aa9.41□□□□□ -0.9
CDH1-203ENST00000561751 UACAQ9BZF9 1416 aa9.41□□□□□ -0.9
CDH1-203ENST00000561751 MRS2Q9HD23 443 aa9.41□□□□□ -0.9
CDH1-203ENST00000561751 CCDC144AA2RUR9 1427 aa9.4□□□□□ -0.9
CDH1-203ENST00000561751 PPRC1Q5VV67 1664 aaKnown RBP9.4□□□□□ -0.9
CDH1-203ENST00000561751 FSD2A1L4K1 749 aa9.4□□□□□ -0.9
CDH1-203ENST00000561751 EIF4G2P78344 907 aaKnown RBP eCLIP9.4□□□□□ -0.9
CDH1-203ENST00000561751 UTP14CQ5TAP6 766 aaKnown RBP9.4□□□□□ -0.9
CDH1-203ENST00000561751 KIAA0586Q9BVV6 1533 aa9.4□□□□□ -0.91
CDH1-203ENST00000561751 GLI2P10070 1586 aa9.39□□□□□ -0.91
CDH1-203ENST00000561751 PDIA4P13667 645 aaKnown RBP9.39□□□□□ -0.91
CDH1-203ENST00000561751 MAP3K9P80192 1104 aa9.39□□□□□ -0.91
CDH1-203ENST00000561751 ADAM33Q9BZ11 813 aa9.39□□□□□ -0.91
CDH1-203ENST00000561751 HCSTQ9UBK5 93 aa9.39□□□□□ -0.91
CDH1-203ENST00000561751 CUL7Q14999 1698 aa9.39□□□□□ -0.91
CDH1-203ENST00000561751 TIAM1Q13009 1591 aa9.38□□□□□ -0.91
CDH1-203ENST00000561751 ZMYM4Q5VZL5 1548 aa9.38□□□□□ -0.91
CDH1-203ENST00000561751 ABCC2Q92887 1545 aa9.38□□□□□ -0.91
CDH1-203ENST00000561751 KDM5BQ9UGL1 1544 aa9.38□□□□□ -0.91
CDH1-203ENST00000561751 RRP1P56182 461 aaKnown RBP9.38□□□□□ -0.91
CDH1-203ENST00000561751 SLC4A5Q9BY07 1137 aa9.38□□□□□ -0.91
CDH1-203ENST00000561751 CCDC18Q5T9S5 1454 aa9.38□□□□□ -0.91
CDH1-203ENST00000561751 CCDC7Q96M83 1385 aa9.37□□□□□ -0.91
CDH1-203ENST00000561751 PTPREP23469 700 aa9.37□□□□□ -0.91
CDH1-203ENST00000561751 MRE11P49959 708 aa9.37□□□□□ -0.91
CDH1-203ENST00000561751 TAF7LQ5H9L4 462 aa9.37□□□□□ -0.91
CDH1-203ENST00000561751 KCTD12Q96CX2 325 aaKnown RBP9.37□□□□□ -0.91
CDH1-203ENST00000561751 ZBED2Q9BTP6 218 aa9.37□□□□□ -0.91
CDH1-203ENST00000561751 AKNAQ7Z591 1439 aa9.37□□□□□ -0.91
CDH1-203ENST00000561751 PLB1Q6P1J6 1458 aa9.36□□□□□ -0.91
CDH1-203ENST00000561751 COL17A1Q9UMD9 1497 aaPredicted RBP9.36□□□□□ -0.91
CDH1-203ENST00000561751 BHMG1C9JSJ3 638 aaPredicted RBP9.36□□□□□ -0.91
CDH1-203ENST00000561751 FAM161AQ3B820 660 aa9.36□□□□□ -0.91
CDH1-203ENST00000561751 NPM2Q86SE8 214 aaKnown RBP9.36□□□□□ -0.91
CDH1-203ENST00000561751 ZDHHC16Q969W1 377 aa9.36□□□□□ -0.91
CDH1-203ENST00000561751 ASXL2Q76L83 1435 aa9.36□□□□□ -0.91
CDH1-203ENST00000561751 POLR1AO95602 1720 aaPredicted RBP9.36□□□□□ -0.91
CDH1-203ENST00000561751 LRRC9Q6ZRR7 1453 aa9.35□□□□□ -0.91
CDH1-203ENST00000561751 GOLGA6L3A6NEY3 463 aa9.35□□□□□ -0.91
CDH1-203ENST00000561751 FRAT2O75474 233 aaPredicted RBP9.35□□□□□ -0.91
CDH1-203ENST00000561751 PCDHGA10Q9Y5H3 936 aa9.35□□□□□ -0.91
CDH1-203ENST00000561751 PTPRGP23470 1445 aa9.34□□□□□ -0.91
CDH1-203ENST00000561751 HSPA5P11021 654 aaKnown RBP9.34□□□□□ -0.91
CDH1-203ENST00000561751 CAMK2BQ13554 666 aa9.34□□□□□ -0.91
CDH1-203ENST00000561751 BECN1Q14457 450 aa9.34□□□□□ -0.91
CDH1-203ENST00000561751 FAM9BQ8IZU0 186 aa9.34□□□□□ -0.91
CDH1-203ENST00000561751 BBXQ8WY36 941 aaPredicted RBP9.34□□□□□ -0.91
CDH1-203ENST00000561751 PLA2G2EQ9NZK7 142 aa9.34□□□□□ -0.91
CDH1-203ENST00000561751 ZMYM3Q14202 1370 aa9.34□□□□□ -0.91
CDH1-203ENST00000561751 HFM1A2PYH4 1435 aa9.33□□□□□ -0.92
CDH1-203ENST00000561751 ESPNB1AK53 854 aa9.33□□□□□ -0.92
CDH1-203ENST00000561751 TAF3Q5VWG9 929 aa9.33□□□□□ -0.92
CDH1-203ENST00000561751 MAP3K4Q9Y6R4 1608 aa9.33□□□□□ -0.92
CDH1-203ENST00000561751 LRPPRCP42704 1394 aaKnown RBP9.33□□□□□ -0.92
CDH1-203ENST00000561751 PHLDB1Q86UU1 1377 aa9.33□□□□□ -0.92
CDH1-203ENST00000561751 UHRF1BP1LA0JNW5 1464 aa9.33□□□□□ -0.92
CDH1-203ENST00000561751 SCAPERQ9BY12 1400 aa9.32□□□□□ -0.92
CDH1-203ENST00000561751 XRCC6P12956 609 aaKnown RBP eCLIP9.32□□□□□ -0.92
CDH1-203ENST00000561751 PTMSP20962 102 aa9.32□□□□□ -0.92
CDH1-203ENST00000561751 RANGAP1P46060 587 aaPredicted RBP9.32□□□□□ -0.92
CDH1-203ENST00000561751 CENPQQ7L2Z9 268 aaPredicted RBP9.32□□□□□ -0.92
CDH1-203ENST00000561751 STAC3Q96MF2 364 aa9.32□□□□□ -0.92
CDH1-203ENST00000561751 ROCK2O75116 1388 aaKnown RBP9.32□□□□□ -0.92
CDH1-203ENST00000561751 EPRSP07814 1512 aaKnown RBP9.31□□□□□ -0.92
CDH1-203ENST00000561751 CCDC184Q52MB2 194 aa9.31□□□□□ -0.92
CDH1-203ENST00000561751 TEX14Q8IWB6 1497 aa9.31□□□□□ -0.92
CDH1-203ENST00000561751 ARHGAP35Q9NRY4 1499 aa9.31□□□□□ -0.92
CDH1-203ENST00000561751 CARMIL2Q6F5E8 1435 aa9.31□□□□□ -0.92
CDH1-203ENST00000561751 MIA2Q96PC5 1412 aa9.31□□□□□ -0.92
CDH1-203ENST00000561751 KIF20AO95235 890 aa9.3□□□□□ -0.92
CDH1-203ENST00000561751 HS1BP3Q53T59 392 aa9.3□□□□□ -0.92
CDH1-203ENST00000561751 PNISRQ8TF01 805 aaKnown RBP9.3□□□□□ -0.92
CDH1-203ENST00000561751 MYH16Q9H6N6 1097 aa9.3□□□□□ -0.92
CDH1-203ENST00000561751 RCAN3Q9UKA8 241 aa9.3□□□□□ -0.92
CDH1-203ENST00000561751 MYOM3Q5VTT5 1437 aa9.3□□□□□ -0.92
CDH1-203ENST00000561751 BRD4O60885 1362 aaPredicted RBP9.29□□□□□ -0.92
CDH1-203ENST00000561751 DPYSL4O14531 572 aa9.29□□□□□ -0.92
CDH1-203ENST00000561751 OFD1O75665 1012 aa9.29□□□□□ -0.92
CDH1-203ENST00000561751 COL9A1P20849 921 aa9.29□□□□□ -0.92
CDH1-203ENST00000561751 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.29□□□□□ -0.92
CDH1-203ENST00000561751 P3H3Q8IVL6 736 aa9.29□□□□□ -0.92
CDH1-203ENST00000561751 SPATA31E1Q6ZUB1 1445 aa9.29□□□□□ -0.92
CDH1-203ENST00000561751 KDM2BQ8NHM5 1336 aa9.29□□□□□ -0.92
CDH1-203ENST00000561751 PHF14O94880 888 aa9.28□□□□□ -0.92
CDH1-203ENST00000561751 TNNT2P45379 298 aaPredicted RBP9.28□□□□□ -0.92
CDH1-203ENST00000561751 EXOC6Q8TAG9 804 aa9.28□□□□□ -0.92
CDH1-203ENST00000561751 HIRIP3Q9BW71 556 aaPredicted RBP9.28□□□□□ -0.92
CDH1-203ENST00000561751 GTPBP4Q9BZE4 634 aaKnown RBP9.28□□□□□ -0.92
CDH1-203ENST00000561751 IQGAP2Q13576 1575 aa9.28□□□□□ -0.92
CDH1-203ENST00000561751 CFAP43Q8NDM7 1665 aa9.27□□□□□ -0.93
CDH1-203ENST00000561751 PTPN5P54829 565 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms