RNA–Protein interactions for RNA: ENST00000561521.1

LINC00662-201, long intergenic non-protein coding RNA 662, humanhuman

TSL 2 BASIC

Gene LINC00662, Length 2,480 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-201ENST00000561521 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC00662-201ENST00000561521 TIAM1Q13009 1591 aa12.48□□□□□ -0.41
LINC00662-201ENST00000561521 CD109Q6YHK3 1445 aa12.48□□□□□ -0.41
LINC00662-201ENST00000561521 DHX29Q7Z478 1369 aaKnown RBP12.47□□□□□ -0.41
LINC00662-201ENST00000561521 PNISRQ8TF01 805 aaKnown RBP12.47□□□□□ -0.41
LINC00662-201ENST00000561521 NCOA3Q9Y6Q9 1424 aa12.47□□□□□ -0.41
LINC00662-201ENST00000561521 NASPP49321 788 aaPredicted RBP12.47□□□□□ -0.41
LINC00662-201ENST00000561521 CC2D1BQ5T0F9 858 aaKnown RBP12.47□□□□□ -0.41
LINC00662-201ENST00000561521 CTR9Q6PD62 1173 aa12.47□□□□□ -0.41
LINC00662-201ENST00000561521 KCNJ4P48050 445 aa12.46□□□□□ -0.41
LINC00662-201ENST00000561521 MFAP1P55081 439 aaKnown RBP12.46□□□□□ -0.41
LINC00662-201ENST00000561521 CBX1P83916 185 aa12.46□□□□□ -0.41
LINC00662-201ENST00000561521 CARD10Q9BWT7 1032 aa12.46□□□□□ -0.42
LINC00662-201ENST00000561521 ZNF710Q8N1W2 664 aa12.45□□□□□ -0.42
LINC00662-201ENST00000561521 CIZ1Q9ULV3 898 aaPredicted RBP12.45□□□□□ -0.42
LINC00662-201ENST00000561521 ARAP3Q8WWN8 1544 aa12.45□□□□□ -0.42
LINC00662-201ENST00000561521 ATP2B3Q16720 1220 aa12.45□□□□□ -0.42
LINC00662-201ENST00000561521 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.45□□□□□ -0.42
LINC00662-201ENST00000561521 OGFRQ9NZT2 677 aa12.45□□□□□ -0.42
LINC00662-201ENST00000561521 BRD4O60885 1362 aaPredicted RBP12.44□□□□□ -0.42
LINC00662-201ENST00000561521 RAD50Q92878 1312 aa12.44□□□□□ -0.42
LINC00662-201ENST00000561521 NBPF20Q3BBV1 942 aa12.44□□□□□ -0.42
LINC00662-201ENST00000561521 ZNF771Q7L3S4 317 aaPredicted RBP12.44□□□□□ -0.42
LINC00662-201ENST00000561521 GZF1Q9H116 711 aaPredicted RBP12.44□□□□□ -0.42
LINC00662-201ENST00000561521 SLKQ9H2G2 1235 aaPredicted RBP12.44□□□□□ -0.42
LINC00662-201ENST00000561521 MAPK8IP3Q9UPT6 1336 aa12.44□□□□□ -0.42
LINC00662-201ENST00000561521 NEO1Q92859 1461 aa12.44□□□□□ -0.42
LINC00662-201ENST00000561521 GAS2L3Q86XJ1 694 aa12.44□□□□□ -0.42
LINC00662-201ENST00000561521 CFAP74Q9C0B2 1584 aa12.43□□□□□ -0.42
LINC00662-201ENST00000561521 MIA2Q96PC5 1412 aa12.43□□□□□ -0.42
LINC00662-201ENST00000561521 PDCL2Q8N4E4 241 aa12.43□□□□□ -0.42
LINC00662-201ENST00000561521 CCDC18Q5T9S5 1454 aa12.42□□□□□ -0.42
LINC00662-201ENST00000561521 SPATA31E1Q6ZUB1 1445 aa12.42□□□□□ -0.42
LINC00662-201ENST00000561521 CRBNQ96SW2 442 aa12.42□□□□□ -0.42
LINC00662-201ENST00000561521 CCDC39Q9UFE4 941 aa12.42□□□□□ -0.42
LINC00662-201ENST00000561521 EIF3AQ14152 1382 aaKnown RBP12.42□□□□□ -0.42
LINC00662-201ENST00000561521 COL17A1Q9UMD9 1497 aaPredicted RBP12.42□□□□□ -0.42
LINC00662-201ENST00000561521 TBC1D32Q96NH3 1257 aa12.42□□□□□ -0.42
LINC00662-201ENST00000561521 TBC1D2Q9BYX2 928 aa12.42□□□□□ -0.42
LINC00662-201ENST00000561521 C1orf115Q9H7X2 142 aa12.42□□□□□ -0.42
LINC00662-201ENST00000561521 MYCNP04198 464 aaPredicted RBP12.41□□□□□ -0.42
LINC00662-201ENST00000561521 ZNF445P59923 1031 aa12.4□□□□□ -0.42
LINC00662-201ENST00000561521 GBP4Q96PP9 640 aa12.4□□□□□ -0.42
LINC00662-201ENST00000561521 CASKIN1Q8WXD9 1431 aa12.4□□□□□ -0.42
LINC00662-201ENST00000561521 SYCP1Q15431 976 aa12.4□□□□□ -0.42
LINC00662-201ENST00000561521 ANKRD7Q92527 254 aa12.4□□□□□ -0.42
LINC00662-201ENST00000561521 BRMS1Q9HCU9 246 aa12.4□□□□□ -0.42
LINC00662-201ENST00000561521 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.4□□□□□ -0.43
LINC00662-201ENST00000561521 E9PSI1 815 aa12.39□□□□□ -0.43
LINC00662-201ENST00000561521 HMGB1P09429 215 aaKnown RBP12.39□□□□□ -0.43
LINC00662-201ENST00000561521 DDIT3P35638 169 aa12.39□□□□□ -0.43
LINC00662-201ENST00000561521 UPF2Q9HAU5 1272 aaKnown RBP12.39□□□□□ -0.43
LINC00662-201ENST00000561521 LRRIQ1Q96JM4 1722 aa12.39□□□□□ -0.43
LINC00662-201ENST00000561521 CDK13Q14004 1512 aaKnown RBP12.39□□□□□ -0.43
LINC00662-201ENST00000561521 CLSTN1O94985 981 aa12.39□□□□□ -0.43
LINC00662-201ENST00000561521 CAPN2P17655 700 aa12.39□□□□□ -0.43
LINC00662-201ENST00000561521 PLEKHD1A6NEE1 506 aa12.38□□□□□ -0.43
LINC00662-201ENST00000561521 XPCQ01831 940 aaPredicted RBP12.38□□□□□ -0.43
LINC00662-201ENST00000561521 CLEC17AQ6ZS10 378 aa12.38□□□□□ -0.43
LINC00662-201ENST00000561521 MYCBPQ99417 103 aaPredicted RBP12.38□□□□□ -0.43
LINC00662-201ENST00000561521 FYCO1Q9BQS8 1478 aa12.38□□□□□ -0.43
LINC00662-201ENST00000561521 PCF11O94913 1555 aaKnown RBP12.38□□□□□ -0.43
LINC00662-201ENST00000561521 SLFN14P0C7P3 912 aa12.38□□□□□ -0.43
LINC00662-201ENST00000561521 ZNF692Q9BU19 519 aaPredicted RBP12.38□□□□□ -0.43
LINC00662-201ENST00000561521 NPC1L1Q9UHC9 1359 aa12.37□□□□□ -0.43
LINC00662-201ENST00000561521 HFM1A2PYH4 1435 aa12.37□□□□□ -0.43
LINC00662-201ENST00000561521 LRRC9Q6ZRR7 1453 aa12.37□□□□□ -0.43
LINC00662-201ENST00000561521 TRIM6-TRIM34B2RNG4 842 aa12.37□□□□□ -0.43
LINC00662-201ENST00000561521 NCAPGQ9BPX3 1015 aa12.37□□□□□ -0.43
LINC00662-201ENST00000561521 TRIM34Q9BYJ4 488 aa12.37□□□□□ -0.43
LINC00662-201ENST00000561521 PANK3Q9H999 370 aa12.37□□□□□ -0.43
LINC00662-201ENST00000561521 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.37□□□□□ -0.43
LINC00662-201ENST00000561521 PTPN23Q9H3S7 1636 aa12.37□□□□□ -0.43
LINC00662-201ENST00000561521 TTC37Q6PGP7 1564 aa12.36□□□□□ -0.43
LINC00662-201ENST00000561521 EGFL6Q8IUX8 553 aa12.36□□□□□ -0.43
LINC00662-201ENST00000561521 NGEFQ8N5V2 710 aa12.36□□□□□ -0.43
LINC00662-201ENST00000561521 CCDC9Q9Y3X0 531 aaKnown RBP12.36□□□□□ -0.43
LINC00662-201ENST00000561521 TROQ12816 1431 aaPredicted RBP12.36□□□□□ -0.43
LINC00662-201ENST00000561521 BRPF1P55201 1214 aaPredicted RBP12.35□□□□□ -0.43
LINC00662-201ENST00000561521 LMOD3Q0VAK6 560 aa12.35□□□□□ -0.43
LINC00662-201ENST00000561521 HSP90AB3PQ58FF7 597 aa12.35□□□□□ -0.43
LINC00662-201ENST00000561521 PLCD4Q9BRC7 762 aa12.35□□□□□ -0.43
LINC00662-201ENST00000561521 KIF7Q2M1P5 1343 aa12.35□□□□□ -0.43
LINC00662-201ENST00000561521 KIF14Q15058 1648 aa12.35□□□□□ -0.43
LINC00662-201ENST00000561521 KIAA2012Q0VF49 1180 aa12.35□□□□□ -0.43
LINC00662-201ENST00000561521 FRMPD1Q5SYB0 1578 aa12.34□□□□□ -0.43
LINC00662-201ENST00000561521 MAPK8IP2Q13387 824 aaPredicted RBP12.34□□□□□ -0.43
LINC00662-201ENST00000561521 FEZ2Q9UHY8 353 aaPredicted RBP12.34□□□□□ -0.43
LINC00662-201ENST00000561521 MYO5CQ9NQX4 1742 aa12.34□□□□□ -0.43
LINC00662-201ENST00000561521 PATL2C9JE40 543 aaKnown RBP12.34□□□□□ -0.43
LINC00662-201ENST00000561521 SATB1Q01826 763 aa12.34□□□□□ -0.43
LINC00662-201ENST00000561521 KLHL40Q2TBA0 621 aa12.34□□□□□ -0.43
LINC00662-201ENST00000561521 RAI14Q9P0K7 980 aa12.33□□□□□ -0.44
LINC00662-201ENST00000561521 CEP83Q9Y592 693 aa12.33□□□□□ -0.44
LINC00662-201ENST00000561521 RICTORQ6R327 1708 aa12.33□□□□□ -0.44
LINC00662-201ENST00000561521 PLCH2O75038 1416 aa12.33□□□□□ -0.44
LINC00662-201ENST00000561521 BLMP54132 1417 aaPredicted RBP12.33□□□□□ -0.44
LINC00662-201ENST00000561521 ARID3CA6NKF2 412 aa12.32□□□□□ -0.44
LINC00662-201ENST00000561521 NOP2P46087 812 aaKnown RBP12.32□□□□□ -0.44
LINC00662-201ENST00000561521 TERF2Q15554 542 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms