RNA–Protein interactions for RNA: ENST00000561449.1

TCF12-226, Transcript of transcription factor 12, humanhuman

TSL 1 (best)

Gene TCF12, Length 914 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-226ENST00000561449 LAMC1P11047 1609 aa11.37□□□□□ -0.59
TCF12-226ENST00000561449 PROSER2Q86WR7 435 aaPredicted RBP11.36□□□□□ -0.59
TCF12-226ENST00000561449 L3MBTL2Q969R5 705 aa11.36□□□□□ -0.59
TCF12-226ENST00000561449 PTPRUQ92729 1446 aa11.35□□□□□ -0.59
TCF12-226ENST00000561449 XRN1Q8IZH2 1706 aaKnown RBP11.35□□□□□ -0.59
TCF12-226ENST00000561449 TMEM94Q12767 1356 aa11.34□□□□□ -0.59
TCF12-226ENST00000561449 ABCC11Q96J66 1382 aa11.34□□□□□ -0.59
TCF12-226ENST00000561449 CFAP70Q5T0N1 1121 aa11.34□□□□□ -0.59
TCF12-226ENST00000561449 TIMELESSQ9UNS1 1208 aa11.34□□□□□ -0.59
TCF12-226ENST00000561449 PTCH1Q13635 1447 aa11.34□□□□□ -0.59
TCF12-226ENST00000561449 LRPPRCP42704 1394 aaKnown RBP11.33□□□□□ -0.6
TCF12-226ENST00000561449 TONSLQ96HA7 1378 aa11.33□□□□□ -0.6
TCF12-226ENST00000561449 EVX2Q03828 476 aa11.33□□□□□ -0.6
TCF12-226ENST00000561449 SIRT1Q96EB6 747 aa11.33□□□□□ -0.6
TCF12-226ENST00000561449 TECPR2O15040 1411 aa11.33□□□□□ -0.6
TCF12-226ENST00000561449 KIAA1210Q9ULL0 1709 aa11.32□□□□□ -0.6
TCF12-226ENST00000561449 MKRN4PQ13434 485 aaPredicted RBP11.32□□□□□ -0.6
TCF12-226ENST00000561449 CCER1Q8TC90 406 aaPredicted RBP11.32□□□□□ -0.6
TCF12-226ENST00000561449 FBXO41Q8TF61 875 aa11.32□□□□□ -0.6
TCF12-226ENST00000561449 XIRP1Q702N8 1843 aaKnown RBP11.32□□□□□ -0.6
TCF12-226ENST00000561449 ASXL1Q8IXJ9 1541 aa11.31□□□□□ -0.6
TCF12-226ENST00000561449 TOM1O60784 492 aa11.31□□□□□ -0.6
TCF12-226ENST00000561449 TMEM132EQ6IEE7 984 aa11.31□□□□□ -0.6
TCF12-226ENST00000561449 CLEC11AQ9Y240 323 aa11.31□□□□□ -0.6
TCF12-226ENST00000561449 YTHDC2Q9H6S0 1430 aaKnown RBP11.31□□□□□ -0.6
TCF12-226ENST00000561449 MSH6P52701 1360 aa11.3□□□□□ -0.6
TCF12-226ENST00000561449 ADGRB1O14514 1584 aa11.3□□□□□ -0.6
TCF12-226ENST00000561449 C19orf44Q9H6X5 657 aa11.3□□□□□ -0.6
TCF12-226ENST00000561449 ROBO2Q9HCK4 1378 aa11.29□□□□□ -0.6
TCF12-226ENST00000561449 KNDC1Q76NI1 1749 aa11.29□□□□□ -0.6
TCF12-226ENST00000561449 FAM135BQ49AJ0 1406 aa11.29□□□□□ -0.6
TCF12-226ENST00000561449 UBAP1LF5GYI3 381 aa11.29□□□□□ -0.6
TCF12-226ENST00000561449 PRKAR2AP13861 404 aaKnown RBP11.29□□□□□ -0.6
TCF12-226ENST00000561449 SPDYE1Q8NFV5 336 aaPredicted RBP11.29□□□□□ -0.6
TCF12-226ENST00000561449 DCCP43146 1447 aa11.28□□□□□ -0.6
TCF12-226ENST00000561449 C14orf37Q86TY3 774 aa11.28□□□□□ -0.6
TCF12-226ENST00000561449 CADPS2Q86UW7 1296 aa11.28□□□□□ -0.6
TCF12-226ENST00000561449 STK26Q9P289 416 aa11.28□□□□□ -0.6
TCF12-226ENST00000561449 DLC1Q96QB1 1528 aa11.28□□□□□ -0.6
TCF12-226ENST00000561449 RBM33Q96EV2 1170 aaKnown RBP11.27□□□□□ -0.61
TCF12-226ENST00000561449 ZNF692Q9BU19 519 aaPredicted RBP11.27□□□□□ -0.61
TCF12-226ENST00000561449 ADGRL3Q9HAR2 1447 aa11.26□□□□□ -0.61
TCF12-226ENST00000561449 ATF3P18847 181 aa11.25□□□□□ -0.61
TCF12-226ENST00000561449 NBPF1Q3BBV0 1214 aa11.25□□□□□ -0.61
TCF12-226ENST00000561449 SSUH2Q9Y2M2 353 aa11.25□□□□□ -0.61
TCF12-226ENST00000561449 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.25□□□□□ -0.61
TCF12-226ENST00000561449 TRPM1Q7Z4N2 1603 aa11.24□□□□□ -0.61
TCF12-226ENST00000561449 NBPF8Q3BBV2 869 aa11.24□□□□□ -0.61
TCF12-226ENST00000561449 WAPLQ7Z5K2 1190 aa11.24□□□□□ -0.61
TCF12-226ENST00000561449 TRAK1Q9UPV9 953 aa11.24□□□□□ -0.61
TCF12-226ENST00000561449 GPRASP1Q5JY77 1395 aa11.24□□□□□ -0.61
TCF12-226ENST00000561449 PRAM1Q96QH2 718 aa11.23□□□□□ -0.61
TCF12-226ENST00000561449 POGKQ9P215 609 aa11.23□□□□□ -0.61
TCF12-226ENST00000561449 SLAIN2Q9P270 581 aa11.23□□□□□ -0.61
TCF12-226ENST00000561449 ROCK2O75116 1388 aaKnown RBP11.23□□□□□ -0.61
TCF12-226ENST00000561449 ILDR1Q86SU0 546 aaPredicted RBP11.22□□□□□ -0.61
TCF12-226ENST00000561449 RALGAPBQ86X10 1494 aa11.22□□□□□ -0.61
TCF12-226ENST00000561449 NALCNQ8IZF0 1738 aa11.22□□□□□ -0.61
TCF12-226ENST00000561449 PLEKHH1Q9ULM0 1364 aa11.22□□□□□ -0.61
TCF12-226ENST00000561449 CDC42BPGQ6DT37 1551 aa11.21□□□□□ -0.61
TCF12-226ENST00000561449 ARHGEF28Q8N1W1 1705 aaKnown RBP11.21□□□□□ -0.62
TCF12-226ENST00000561449 PIP4K2BP78356 416 aa11.2□□□□□ -0.62
TCF12-226ENST00000561449 MST1RQ04912 1400 aa11.19□□□□□ -0.62
TCF12-226ENST00000561449 EIF3AQ14152 1382 aaKnown RBP11.19□□□□□ -0.62
TCF12-226ENST00000561449 CARD11Q9BXL7 1154 aa11.19□□□□□ -0.62
TCF12-226ENST00000561449 CENPJQ9HC77 1338 aaPredicted RBP11.18□□□□□ -0.62
TCF12-226ENST00000561449 ADGRB2O60241 1585 aa11.18□□□□□ -0.62
TCF12-226ENST00000561449 C19orf67A6NJJ6 358 aa11.17□□□□□ -0.62
TCF12-226ENST00000561449 SAFB2Q14151 953 aaKnown RBP eCLIP11.17□□□□□ -0.62
TCF12-226ENST00000561449 C1orf167Q5SNV9 1468 aa11.17□□□□□ -0.62
TCF12-226ENST00000561449 MINK1Q8N4C8 1332 aaPredicted RBP11.16□□□□□ -0.62
TCF12-226ENST00000561449 WASLO00401 505 aaPredicted RBP11.16□□□□□ -0.62
TCF12-226ENST00000561449 ROBO1Q9Y6N7 1651 aa11.16□□□□□ -0.62
TCF12-226ENST00000561449 SBNO2Q9Y2G9 1366 aa11.16□□□□□ -0.62
TCF12-226ENST00000561449 FMN2Q9NZ56 1722 aa11.15□□□□□ -0.62
TCF12-226ENST00000561449 SLC24A1O60721 1099 aa11.15□□□□□ -0.62
TCF12-226ENST00000561449 BRINP3Q76B58 766 aa11.15□□□□□ -0.62
TCF12-226ENST00000561449 ANKARQ7Z5J8 1434 aa11.15□□□□□ -0.62
TCF12-226ENST00000561449 HSPA1LP34931 641 aa11.13□□□□□ -0.63
TCF12-226ENST00000561449 HIRIP3Q9BW71 556 aaPredicted RBP11.13□□□□□ -0.63
TCF12-226ENST00000561449 QRICH2Q9H0J4 1663 aa11.13□□□□□ -0.63
TCF12-226ENST00000561449 ESCO1Q5FWF5 840 aa11.12□□□□□ -0.63
TCF12-226ENST00000561449 CHADLQ6NUI6 762 aa11.12□□□□□ -0.63
TCF12-226ENST00000561449 ORAI2Q96SN7 254 aa11.12□□□□□ -0.63
TCF12-226ENST00000561449 CDK19Q9BWU1 502 aa11.12□□□□□ -0.63
TCF12-226ENST00000561449 TULP4Q9NRJ4 1543 aa11.12□□□□□ -0.63
TCF12-226ENST00000561449 AHDC1Q5TGY3 1603 aaPredicted RBP11.12□□□□□ -0.63
TCF12-226ENST00000561449 EVC2Q86UK5 1308 aa11.11□□□□□ -0.63
TCF12-226ENST00000561449 NPHP3Q7Z494 1330 aa11.1□□□□□ -0.63
TCF12-226ENST00000561449 NUTM2FA1L443 756 aa11.1□□□□□ -0.63
TCF12-226ENST00000561449 PHF8Q9UPP1 1060 aa11.1□□□□□ -0.63
TCF12-226ENST00000561449 CCDC61Q9Y6R9 512 aa11.1□□□□□ -0.63
TCF12-226ENST00000561449 USP47Q96K76 1375 aa11.1□□□□□ -0.63
TCF12-226ENST00000561449 KIF1AQ12756 1690 aa11.1□□□□□ -0.63
TCF12-226ENST00000561449 NHSL1Q5SYE7 1610 aa11.09□□□□□ -0.63
TCF12-226ENST00000561449 RGPD8O14715 1765 aaPredicted RBP11.09□□□□□ -0.63
TCF12-226ENST00000561449 ST20-MTHFSA0A0A6YYL1 179 aa11.09□□□□□ -0.63
TCF12-226ENST00000561449 SRPK2P78362 688 aaKnown RBP11.09□□□□□ -0.63
TCF12-226ENST00000561449 NUDT16Q96DE0 195 aaKnown RBP11.09□□□□□ -0.63
TCF12-226ENST00000561449 PUS7Q96PZ0 661 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms