RNA–Protein interactions for RNA: ENST00000561437.1

PPP1R3E-209, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 2

Gene PPP1R3E, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-209ENST00000561437 NRXN3Q9Y4C0 1643 aa23.18■■□□□ 1.3
PPP1R3E-209ENST00000561437 PIP4K2BP78356 416 aa23.17■■□□□ 1.3
PPP1R3E-209ENST00000561437 PHF23Q9BUL5 403 aaPredicted RBP23.16■■□□□ 1.3
PPP1R3E-209ENST00000561437 TBX22Q9Y458 520 aa23.16■■□□□ 1.3
PPP1R3E-209ENST00000561437 KNDC1Q76NI1 1749 aa23.16■■□□□ 1.3
PPP1R3E-209ENST00000561437 TECPR2O15040 1411 aa23.16■■□□□ 1.3
PPP1R3E-209ENST00000561437 FAM135BQ49AJ0 1406 aa23.16■■□□□ 1.3
PPP1R3E-209ENST00000561437 STK26Q9P289 416 aa23.15■■□□□ 1.3
PPP1R3E-209ENST00000561437 TOM1O60784 492 aa23.13■■□□□ 1.29
PPP1R3E-209ENST00000561437 ANKLE2Q86XL3 938 aa23.13■■□□□ 1.29
PPP1R3E-209ENST00000561437 PANK3Q9H999 370 aa23.13■■□□□ 1.29
PPP1R3E-209ENST00000561437 KNSTRNQ9Y448 316 aa23.13■■□□□ 1.29
PPP1R3E-209ENST00000561437 LTKP29376 864 aa23.12■■□□□ 1.29
PPP1R3E-209ENST00000561437 PRAM1Q96QH2 718 aa23.12■■□□□ 1.29
PPP1R3E-209ENST00000561437 ATAD2Q6PL18 1390 aa23.12■■□□□ 1.29
PPP1R3E-209ENST00000561437 PIK3R4Q99570 1358 aa23.12■■□□□ 1.29
PPP1R3E-209ENST00000561437 ADAMTS13Q76LX8 1427 aa23.11■■□□□ 1.29
PPP1R3E-209ENST00000561437 PER1O15534 1290 aaPredicted RBP23.11■■□□□ 1.29
PPP1R3E-209ENST00000561437 NPC1L1Q9UHC9 1359 aa23.11■■□□□ 1.29
PPP1R3E-209ENST00000561437 MED14O60244 1454 aa23.11■■□□□ 1.29
PPP1R3E-209ENST00000561437 CPS1P31327 1500 aa23.09■■□□□ 1.29
PPP1R3E-209ENST00000561437 METP08581 1390 aa23.08■■□□□ 1.29
PPP1R3E-209ENST00000561437 MYOM1P52179 1685 aa23.06■■□□□ 1.28
PPP1R3E-209ENST00000561437 MYBBP1AQ9BQG0 1328 aaKnown RBP23.06■■□□□ 1.28
PPP1R3E-209ENST00000561437 TULP4Q9NRJ4 1543 aa23.04■■□□□ 1.28
PPP1R3E-209ENST00000561437 SRPK2P78362 688 aaKnown RBP23.03■■□□□ 1.28
PPP1R3E-209ENST00000561437 PARD3Q8TEW0 1356 aa23.02■■□□□ 1.28
PPP1R3E-209ENST00000561437 BRD4O60885 1362 aaPredicted RBP23.01■■□□□ 1.27
PPP1R3E-209ENST00000561437 PTCH1Q13635 1447 aa23■■□□□ 1.27
PPP1R3E-209ENST00000561437 TMC1Q8TDI8 760 aa23■■□□□ 1.27
PPP1R3E-209ENST00000561437 YTHDC1Q96MU7 727 aaKnown RBP23■■□□□ 1.27
PPP1R3E-209ENST00000561437 MRS2Q9HD23 443 aa23■■□□□ 1.27
PPP1R3E-209ENST00000561437 MINK1Q8N4C8 1332 aaPredicted RBP23■■□□□ 1.27
PPP1R3E-209ENST00000561437 NLRP13Q86W25 1043 aa22.99■■□□□ 1.27
PPP1R3E-209ENST00000561437 TERF2IPQ9NYB0 399 aa22.99■■□□□ 1.27
PPP1R3E-209ENST00000561437 ANKRD36BQ8N2N9 1353 aa22.99■■□□□ 1.27
PPP1R3E-209ENST00000561437 SAFB2Q14151 953 aaKnown RBP eCLIP22.98■■□□□ 1.27
PPP1R3E-209ENST00000561437 SENP3Q9H4L4 574 aaPredicted RBP22.98■■□□□ 1.27
PPP1R3E-209ENST00000561437 SLC26A8Q96RN1 970 aa22.97■■□□□ 1.27
PPP1R3E-209ENST00000561437 CDK19Q9BWU1 502 aa22.97■■□□□ 1.27
PPP1R3E-209ENST00000561437 WASLO00401 505 aaPredicted RBP22.96■■□□□ 1.27
PPP1R3E-209ENST00000561437 AMOTL2Q9Y2J4 779 aa22.96■■□□□ 1.27
PPP1R3E-209ENST00000561437 NSD2O96028 1365 aa22.96■■□□□ 1.27
PPP1R3E-209ENST00000561437 AMER1Q5JTC6 1135 aaPredicted RBP22.95■■□□□ 1.26
PPP1R3E-209ENST00000561437 HDGFL2Q7Z4V5 671 aaPredicted RBP22.95■■□□□ 1.26
PPP1R3E-209ENST00000561437 WAPLQ7Z5K2 1190 aa22.95■■□□□ 1.26
PPP1R3E-209ENST00000561437 USP32Q8NFA0 1604 aa22.95■■□□□ 1.26
PPP1R3E-209ENST00000561437 CABP2Q9NPB3 220 aa22.95■■□□□ 1.26
PPP1R3E-209ENST00000561437 ADGRB2O60241 1585 aa22.94■■□□□ 1.26
PPP1R3E-209ENST00000561437 CGNL1Q0VF96 1302 aa22.93■■□□□ 1.26
PPP1R3E-209ENST00000561437 NPHP4O75161 1426 aaPredicted RBP22.92■■□□□ 1.26
PPP1R3E-209ENST00000561437 SLC12A5Q9H2X9 1139 aa22.92■■□□□ 1.26
PPP1R3E-209ENST00000561437 CC2D1BQ5T0F9 858 aaKnown RBP22.91■■□□□ 1.26
PPP1R3E-209ENST00000561437 ROBO2Q9HCK4 1378 aa22.9■■□□□ 1.26
PPP1R3E-209ENST00000561437 PLEKHH1Q9ULM0 1364 aa22.9■■□□□ 1.26
PPP1R3E-209ENST00000561437 XRN1Q8IZH2 1706 aaKnown RBP22.9■■□□□ 1.26
PPP1R3E-209ENST00000561437 ATP7BP35670 1465 aa22.9■■□□□ 1.26
PPP1R3E-209ENST00000561437 PTPRUQ92729 1446 aa22.89■■□□□ 1.25
PPP1R3E-209ENST00000561437 NSD3Q9BZ95 1437 aa22.89■■□□□ 1.25
PPP1R3E-209ENST00000561437 CCDC61Q9Y6R9 512 aa22.87■■□□□ 1.25
PPP1R3E-209ENST00000561437 CARD14Q9BXL6 1004 aa22.86■■□□□ 1.25
PPP1R3E-209ENST00000561437 INSRP06213 1382 aa22.86■■□□□ 1.25
PPP1R3E-209ENST00000561437 ZNF692Q9BU19 519 aaPredicted RBP22.85■■□□□ 1.25
PPP1R3E-209ENST00000561437 CHD2O14647 1828 aaKnown RBP22.85■■□□□ 1.25
PPP1R3E-209ENST00000561437 CNGB1Q14028 1251 aaPredicted RBP22.84■■□□□ 1.25
PPP1R3E-209ENST00000561437 NUDT16Q96DE0 195 aaKnown RBP22.83■■□□□ 1.25
PPP1R3E-209ENST00000561437 A0A1W2PP64 1363 aa22.81■■□□□ 1.24
PPP1R3E-209ENST00000561437 KCNA6P17658 529 aa22.81■■□□□ 1.24
PPP1R3E-209ENST00000561437 MORC1Q86VD1 984 aa22.81■■□□□ 1.24
PPP1R3E-209ENST00000561437 FAM9BQ8IZU0 186 aa22.81■■□□□ 1.24
PPP1R3E-209ENST00000561437 PNISRQ8TF01 805 aaKnown RBP22.81■■□□□ 1.24
PPP1R3E-209ENST00000561437 CABP1Q9NZU7 370 aa22.81■■□□□ 1.24
PPP1R3E-209ENST00000561437 PPP2R1AP30153 589 aa22.8■■□□□ 1.24
PPP1R3E-209ENST00000561437 PPIP5K1Q6PFW1 1433 aa22.8■■□□□ 1.24
PPP1R3E-209ENST00000561437 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.79■■□□□ 1.24
PPP1R3E-209ENST00000561437 ANKARQ7Z5J8 1434 aa22.78■■□□□ 1.24
PPP1R3E-209ENST00000561437 RGS17Q9UGC6 210 aaPredicted RBP22.78■■□□□ 1.24
PPP1R3E-209ENST00000561437 CCDC184Q52MB2 194 aa22.77■■□□□ 1.24
PPP1R3E-209ENST00000561437 EDC4Q6P2E9 1401 aaKnown RBP22.76■■□□□ 1.23
PPP1R3E-209ENST00000561437 PLEKHG3A1L390 1219 aa22.76■■□□□ 1.23
PPP1R3E-209ENST00000561437 ITSN1Q15811 1721 aa22.76■■□□□ 1.23
PPP1R3E-209ENST00000561437 LRRC7Q96NW7 1537 aa22.76■■□□□ 1.23
PPP1R3E-209ENST00000561437 NWD1Q149M9 1564 aa22.76■■□□□ 1.23
PPP1R3E-209ENST00000561437 CDC42BPGQ6DT37 1551 aa22.76■■□□□ 1.23
PPP1R3E-209ENST00000561437 CPSF1Q10570 1443 aaKnown RBP22.75■■□□□ 1.23
PPP1R3E-209ENST00000561437 CD163L1Q9NR16 1453 aa22.75■■□□□ 1.23
PPP1R3E-209ENST00000561437 HNRNPUQ00839 825 aaKnown RBP eCLIP22.75■■□□□ 1.23
PPP1R3E-209ENST00000561437 STRCP1A6NGW2 1772 aa22.75■■□□□ 1.23
PPP1R3E-209ENST00000561437 NKTRP30414 1462 aaKnown RBP22.73■■□□□ 1.23
PPP1R3E-209ENST00000561437 CFAP53Q96M91 514 aa22.72■■□□□ 1.23
PPP1R3E-209ENST00000561437 NCOA3Q9Y6Q9 1424 aa22.72■■□□□ 1.23
PPP1R3E-209ENST00000561437 TOPAZ1Q8N9V7 1692 aa22.71■■□□□ 1.23
PPP1R3E-209ENST00000561437 ANKRD26Q9UPS8 1709 aa22.71■■□□□ 1.23
PPP1R3E-209ENST00000561437 WDR43Q15061 677 aaKnown RBP eCLIP22.7■■□□□ 1.22
PPP1R3E-209ENST00000561437 POLR3AO14802 1390 aaPredicted RBP22.7■■□□□ 1.22
PPP1R3E-209ENST00000561437 ZBED9Q6R2W3 1325 aa22.69■■□□□ 1.22
PPP1R3E-209ENST00000561437 AKAP12Q02952 1782 aa22.68■■□□□ 1.22
PPP1R3E-209ENST00000561437 ADGRL3Q9HAR2 1447 aa22.68■■□□□ 1.22
PPP1R3E-209ENST00000561437 KIF20BQ96Q89 1820 aa22.68■■□□□ 1.22
PPP1R3E-209ENST00000561437 MON2Q7Z3U7 1717 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms