RNA–Protein interactions for RNA: ENST00000561410.5

AP3S2-215, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 4

Gene AP3S2, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-215ENST00000561410 FAM135BQ49AJ0 1406 aa18.74■□□□□ 0.59
AP3S2-215ENST00000561410 TULP4Q9NRJ4 1543 aa18.74■□□□□ 0.59
AP3S2-215ENST00000561410 DIP2AQ14689 1571 aa18.74■□□□□ 0.59
AP3S2-215ENST00000561410 WAPLQ7Z5K2 1190 aa18.74■□□□□ 0.59
AP3S2-215ENST00000561410 CC2D1BQ5T0F9 858 aaKnown RBP18.73■□□□□ 0.59
AP3S2-215ENST00000561410 CABP2Q9NPB3 220 aa18.73■□□□□ 0.59
AP3S2-215ENST00000561410 MYBBP1AQ9BQG0 1328 aaKnown RBP18.73■□□□□ 0.59
AP3S2-215ENST00000561410 MYOM1P52179 1685 aa18.73■□□□□ 0.59
AP3S2-215ENST00000561410 MED14O60244 1454 aa18.72■□□□□ 0.59
AP3S2-215ENST00000561410 ATAD2Q6PL18 1390 aa18.72■□□□□ 0.59
AP3S2-215ENST00000561410 NINLQ9Y2I6 1382 aa18.72■□□□□ 0.59
AP3S2-215ENST00000561410 CDK19Q9BWU1 502 aa18.71■□□□□ 0.59
AP3S2-215ENST00000561410 KNDC1Q76NI1 1749 aa18.71■□□□□ 0.59
AP3S2-215ENST00000561410 PARD3Q8TEW0 1356 aa18.7■□□□□ 0.58
AP3S2-215ENST00000561410 PLEKHH1Q9ULM0 1364 aa18.7■□□□□ 0.58
AP3S2-215ENST00000561410 CPS1P31327 1500 aa18.7■□□□□ 0.58
AP3S2-215ENST00000561410 SLC12A5Q9H2X9 1139 aa18.69■□□□□ 0.58
AP3S2-215ENST00000561410 AMOTL2Q9Y2J4 779 aa18.68■□□□□ 0.58
AP3S2-215ENST00000561410 SETD1BQ9UPS6 1966 aaKnown RBP18.68■□□□□ 0.58
AP3S2-215ENST00000561410 NPC1L1Q9UHC9 1359 aa18.68■□□□□ 0.58
AP3S2-215ENST00000561410 PIK3R4Q99570 1358 aa18.67■□□□□ 0.58
AP3S2-215ENST00000561410 ROBO2Q9HCK4 1378 aa18.67■□□□□ 0.58
AP3S2-215ENST00000561410 CCDC184Q52MB2 194 aa18.66■□□□□ 0.58
AP3S2-215ENST00000561410 AMER1Q5JTC6 1135 aaPredicted RBP18.66■□□□□ 0.58
AP3S2-215ENST00000561410 NLRP13Q86W25 1043 aa18.66■□□□□ 0.58
AP3S2-215ENST00000561410 TERF2IPQ9NYB0 399 aa18.66■□□□□ 0.58
AP3S2-215ENST00000561410 BRD4O60885 1362 aaPredicted RBP18.66■□□□□ 0.58
AP3S2-215ENST00000561410 WASLO00401 505 aaPredicted RBP18.65■□□□□ 0.58
AP3S2-215ENST00000561410 ANKRD36BQ8N2N9 1353 aa18.65■□□□□ 0.58
AP3S2-215ENST00000561410 CARD14Q9BXL6 1004 aa18.64■□□□□ 0.57
AP3S2-215ENST00000561410 PTPRUQ92729 1446 aa18.64■□□□□ 0.57
AP3S2-215ENST00000561410 NSD3Q9BZ95 1437 aa18.64■□□□□ 0.57
AP3S2-215ENST00000561410 HDGFL2Q7Z4V5 671 aaPredicted RBP18.63■□□□□ 0.57
AP3S2-215ENST00000561410 FAM9BQ8IZU0 186 aa18.63■□□□□ 0.57
AP3S2-215ENST00000561410 NPHP4O75161 1426 aaPredicted RBP18.63■□□□□ 0.57
AP3S2-215ENST00000561410 PTCH1Q13635 1447 aa18.63■□□□□ 0.57
AP3S2-215ENST00000561410 CGNL1Q0VF96 1302 aa18.61■□□□□ 0.57
AP3S2-215ENST00000561410 NCKAP5LQ9HCH0 1330 aa18.58■□□□□ 0.57
AP3S2-215ENST00000561410 CABP1Q9NZU7 370 aa18.58■□□□□ 0.56
AP3S2-215ENST00000561410 A0A1W2PP64 1363 aa18.57■□□□□ 0.56
AP3S2-215ENST00000561410 PPP2R1AP30153 589 aa18.57■□□□□ 0.56
AP3S2-215ENST00000561410 HNRNPUQ00839 825 aaKnown RBP eCLIP18.57■□□□□ 0.56
AP3S2-215ENST00000561410 MORC1Q86VD1 984 aa18.57■□□□□ 0.56
AP3S2-215ENST00000561410 NUDT16Q96DE0 195 aaKnown RBP18.57■□□□□ 0.56
AP3S2-215ENST00000561410 NSD2O96028 1365 aa18.56■□□□□ 0.56
AP3S2-215ENST00000561410 ADGRB2O60241 1585 aa18.56■□□□□ 0.56
AP3S2-215ENST00000561410 KCNA6P17658 529 aa18.56■□□□□ 0.56
AP3S2-215ENST00000561410 XRN1Q8IZH2 1706 aaKnown RBP18.55■□□□□ 0.56
AP3S2-215ENST00000561410 ATP7BP35670 1465 aa18.55■□□□□ 0.56
AP3S2-215ENST00000561410 KDM4FA0A1W2PPD8 638 aa18.55■□□□□ 0.56
AP3S2-215ENST00000561410 PNISRQ8TF01 805 aaKnown RBP18.55■□□□□ 0.56
AP3S2-215ENST00000561410 CCDC61Q9Y6R9 512 aa18.55■□□□□ 0.56
AP3S2-215ENST00000561410 USP32Q8NFA0 1604 aa18.55■□□□□ 0.56
AP3S2-215ENST00000561410 PPIP5K1Q6PFW1 1433 aa18.55■□□□□ 0.56
AP3S2-215ENST00000561410 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.52■□□□□ 0.55
AP3S2-215ENST00000561410 CD163L1Q9NR16 1453 aa18.51■□□□□ 0.55
AP3S2-215ENST00000561410 WDR43Q15061 677 aaKnown RBP eCLIP18.48■□□□□ 0.55
AP3S2-215ENST00000561410 ZNF692Q9BU19 519 aaPredicted RBP18.48■□□□□ 0.55
AP3S2-215ENST00000561410 PRR36Q9H6K5 1346 aa18.48■□□□□ 0.55
AP3S2-215ENST00000561410 TNNT2P45379 298 aaPredicted RBP18.47■□□□□ 0.55
AP3S2-215ENST00000561410 CDC42BPGQ6DT37 1551 aa18.47■□□□□ 0.55
AP3S2-215ENST00000561410 NUTM2FA1L443 756 aa18.46■□□□□ 0.55
AP3S2-215ENST00000561410 C14orf37Q86TY3 774 aa18.46■□□□□ 0.55
AP3S2-215ENST00000561410 CPSF1Q10570 1443 aaKnown RBP18.46■□□□□ 0.55
AP3S2-215ENST00000561410 EDC4Q6P2E9 1401 aaKnown RBP18.46■□□□□ 0.55
AP3S2-215ENST00000561410 CHD2O14647 1828 aaKnown RBP18.46■□□□□ 0.55
AP3S2-215ENST00000561410 PLEKHG3A1L390 1219 aa18.45■□□□□ 0.54
AP3S2-215ENST00000561410 HSPA2P54652 639 aa18.45■□□□□ 0.54
AP3S2-215ENST00000561410 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.45■□□□□ 0.54
AP3S2-215ENST00000561410 GGNBP2Q9H3C7 697 aa18.45■□□□□ 0.54
AP3S2-215ENST00000561410 ANKARQ7Z5J8 1434 aa18.44■□□□□ 0.54
AP3S2-215ENST00000561410 FYB1O15117 783 aa18.44■□□□□ 0.54
AP3S2-215ENST00000561410 CFAP53Q96M91 514 aa18.44■□□□□ 0.54
AP3S2-215ENST00000561410 PROSER2Q86WR7 435 aaPredicted RBP18.42■□□□□ 0.54
AP3S2-215ENST00000561410 ACEP12821 1306 aa18.42■□□□□ 0.54
AP3S2-215ENST00000561410 ZBED9Q6R2W3 1325 aa18.42■□□□□ 0.54
AP3S2-215ENST00000561410 NWD1Q149M9 1564 aa18.42■□□□□ 0.54
AP3S2-215ENST00000561410 INSRP06213 1382 aa18.42■□□□□ 0.54
AP3S2-215ENST00000561410 LMTK3Q96Q04 1460 aa18.41■□□□□ 0.54
AP3S2-215ENST00000561410 ADGRL3Q9HAR2 1447 aa18.4■□□□□ 0.54
AP3S2-215ENST00000561410 NGDNQ8NEJ9 315 aaKnown RBP18.4■□□□□ 0.54
AP3S2-215ENST00000561410 TOPAZ1Q8N9V7 1692 aa18.4■□□□□ 0.54
AP3S2-215ENST00000561410 POLR3AO14802 1390 aaPredicted RBP18.4■□□□□ 0.54
AP3S2-215ENST00000561410 NKTRP30414 1462 aaKnown RBP18.39■□□□□ 0.54
AP3S2-215ENST00000561410 ITSN1Q15811 1721 aa18.39■□□□□ 0.53
AP3S2-215ENST00000561410 MTHFSP49914 203 aa18.38■□□□□ 0.53
AP3S2-215ENST00000561410 RBM33Q96EV2 1170 aaKnown RBP18.38■□□□□ 0.53
AP3S2-215ENST00000561410 PMFBP1Q8TBY8 1022 aa18.37■□□□□ 0.53
AP3S2-215ENST00000561410 COG3Q96JB2 828 aa18.37■□□□□ 0.53
AP3S2-215ENST00000561410 KIF20BQ96Q89 1820 aa18.37■□□□□ 0.53
AP3S2-215ENST00000561410 NME9Q86XW9 330 aa18.36■□□□□ 0.53
AP3S2-215ENST00000561410 ADAMTS8Q9UP79 889 aa18.36■□□□□ 0.53
AP3S2-215ENST00000561410 MON2Q7Z3U7 1717 aa18.35■□□□□ 0.53
AP3S2-215ENST00000561410 NALCNQ8IZF0 1738 aa18.35■□□□□ 0.53
AP3S2-215ENST00000561410 FMN2Q9NZ56 1722 aa18.35■□□□□ 0.53
AP3S2-215ENST00000561410 ANKRD26Q9UPS8 1709 aa18.35■□□□□ 0.53
AP3S2-215ENST00000561410 USP6P35125 1406 aa18.35■□□□□ 0.53
AP3S2-215ENST00000561410 BLMP54132 1417 aaPredicted RBP18.35■□□□□ 0.53
AP3S2-215ENST00000561410 TTC21BQ7Z4L5 1316 aa18.35■□□□□ 0.53
AP3S2-215ENST00000561410 AKAP12Q02952 1782 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms