RNA–Protein interactions for RNA: ENST00000561308.5

LINS1-214, Transcript of lines homolog 1, humanhuman

TSL 1 (best) BASIC

Gene LINS1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-214ENST00000561308 USP46P62068 366 aa10.85□□□□□ -0.67
LINS1-214ENST00000561308 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.85□□□□□ -0.67
LINS1-214ENST00000561308 ZBTB24O43167 697 aaPredicted RBP10.84□□□□□ -0.67
LINS1-214ENST00000561308 CLCN1P35523 988 aa10.84□□□□□ -0.67
LINS1-214ENST00000561308 GPCPD1Q9NPB8 672 aa10.84□□□□□ -0.67
LINS1-214ENST00000561308 KRI1Q8N9T8 703 aaKnown RBP10.83□□□□□ -0.68
LINS1-214ENST00000561308 USB1Q9BQ65 265 aaKnown RBP10.83□□□□□ -0.68
LINS1-214ENST00000561308 MMP16P51512 607 aa10.82□□□□□ -0.68
LINS1-214ENST00000561308 HLA-CQ95604 372 aa10.82□□□□□ -0.68
LINS1-214ENST00000561308 HOXA2O43364 376 aa10.81□□□□□ -0.68
LINS1-214ENST00000561308 FAM217BQ9NTX9 383 aaPredicted RBP10.81□□□□□ -0.68
LINS1-214ENST00000561308 CYP4X1Q8N118 509 aa10.8□□□□□ -0.68
LINS1-214ENST00000561308 TOR4AQ9NXH8 423 aa10.8□□□□□ -0.68
LINS1-214ENST00000561308 DXOO77932 396 aaKnown RBP10.79□□□□□ -0.68
LINS1-214ENST00000561308 ST8SIA5O15466 376 aa10.78□□□□□ -0.68
LINS1-214ENST00000561308 AAASQ9NRG9 546 aa10.78□□□□□ -0.68
LINS1-214ENST00000561308 GUCA2AQ02747 115 aa10.76□□□□□ -0.69
LINS1-214ENST00000561308 TRIM32Q13049 653 aa10.76□□□□□ -0.69
LINS1-214ENST00000561308 NUTM1Q86Y26 1132 aa10.76□□□□□ -0.69
LINS1-214ENST00000561308 ZNF775Q96BV0 537 aaPredicted RBP10.76□□□□□ -0.69
LINS1-214ENST00000561308 POTECB2RU33 542 aa10.76□□□□□ -0.69
LINS1-214ENST00000561308 TTC24A2A3L6 582 aaPredicted RBP10.74□□□□□ -0.69
LINS1-214ENST00000561308 WNT7AO00755 349 aa10.74□□□□□ -0.69
LINS1-214ENST00000561308 CCDC24Q8N4L8 307 aa10.74□□□□□ -0.69
LINS1-214ENST00000561308 REPIN1Q9BWE0 567 aaKnown RBP10.74□□□□□ -0.69
LINS1-214ENST00000561308 AVPP01185 164 aa10.73□□□□□ -0.69
LINS1-214ENST00000561308 BARGINQ6ZT62 677 aa10.73□□□□□ -0.69
LINS1-214ENST00000561308 CRIPAKQ8N1N5 446 aa10.73□□□□□ -0.69
LINS1-214ENST00000561308 SYMPKQ92797 1274 aaKnown RBP10.73□□□□□ -0.69
LINS1-214ENST00000561308 ZMYND10O75800 440 aa10.71□□□□□ -0.69
LINS1-214ENST00000561308 JUNDP17535 347 aa10.71□□□□□ -0.69
LINS1-214ENST00000561308 SSTR3P32745 418 aaPredicted RBP10.71□□□□□ -0.69
LINS1-214ENST00000561308 TTLL12Q14166 644 aaPredicted RBP10.7□□□□□ -0.7
LINS1-214ENST00000561308 SNIP1Q8TAD8 396 aaKnown RBP10.7□□□□□ -0.7
LINS1-214ENST00000561308 AXIN1O15169 862 aa10.69□□□□□ -0.7
LINS1-214ENST00000561308 FDX1P10109 184 aa10.69□□□□□ -0.7
LINS1-214ENST00000561308 CTC1Q2NKJ3 1217 aa10.69□□□□□ -0.7
LINS1-214ENST00000561308 RETREG3Q86VR2 466 aa10.69□□□□□ -0.7
LINS1-214ENST00000561308 MRGPRX2Q96LB1 330 aa10.69□□□□□ -0.7
LINS1-214ENST00000561308 ZC3H15Q8WU90 426 aaKnown RBP10.69□□□□□ -0.7
LINS1-214ENST00000561308 DACH1Q9UI36 760 aa10.69□□□□□ -0.7
LINS1-214ENST00000561308 AMHR2Q16671 573 aa10.67□□□□□ -0.7
LINS1-214ENST00000561308 SPIRE2Q8WWL2 714 aa10.67□□□□□ -0.7
LINS1-214ENST00000561308 PCDHGC3Q9UN70 934 aa10.67□□□□□ -0.7
LINS1-214ENST00000561308 C6orf229H3BNL8 230 aa10.66□□□□□ -0.7
LINS1-214ENST00000561308 SMPD1P17405 629 aa10.66□□□□□ -0.7
LINS1-214ENST00000561308 SMCPP49901 116 aaPredicted RBP10.66□□□□□ -0.7
LINS1-214ENST00000561308 WNT7BP56706 349 aa10.66□□□□□ -0.7
LINS1-214ENST00000561308 RC3H1Q5TC82 1133 aaKnown RBP10.66□□□□□ -0.7
LINS1-214ENST00000561308 NUDT12Q9BQG2 462 aa10.66□□□□□ -0.7
LINS1-214ENST00000561308 SKOR1P84550 965 aa10.65□□□□□ -0.7
LINS1-214ENST00000561308 J3QL48 77 aa10.64□□□□□ -0.71
LINS1-214ENST00000561308 NDUFV2P19404 249 aa10.63□□□□□ -0.71
LINS1-214ENST00000561308 GIGYF2Q6Y7W6 1299 aaKnown RBP10.63□□□□□ -0.71
LINS1-214ENST00000561308 MOXD2PA6NHM9 499 aa10.62□□□□□ -0.71
LINS1-214ENST00000561308 GMPR2Q9P2T1 348 aaKnown RBP10.62□□□□□ -0.71
LINS1-214ENST00000561308 MS4A1P11836 297 aa10.62□□□□□ -0.71
LINS1-214ENST00000561308 PTCRAQ6ISU1 281 aaPredicted RBP10.62□□□□□ -0.71
LINS1-214ENST00000561308 C11orf95C9JLR9 678 aaPredicted RBP10.6□□□□□ -0.71
LINS1-214ENST00000561308 BEGAINQ9BUH8 593 aa10.6□□□□□ -0.71
LINS1-214ENST00000561308 CCNYL3P0C7X3 344 aa10.59□□□□□ -0.71
LINS1-214ENST00000561308 HPS1Q92902 700 aa10.58□□□□□ -0.72
LINS1-214ENST00000561308 MTMR2Q13614 643 aa10.57□□□□□ -0.72
LINS1-214ENST00000561308 PTPRNQ16849 979 aa10.57□□□□□ -0.72
LINS1-214ENST00000561308 PRR7Q8TB68 274 aa10.57□□□□□ -0.72
LINS1-214ENST00000561308 SPDYE5A6NIY4 337 aa10.56□□□□□ -0.72
LINS1-214ENST00000561308 PARP9Q8IXQ6 854 aa10.56□□□□□ -0.72
LINS1-214ENST00000561308 EHBP1Q8NDI1 1231 aa10.56□□□□□ -0.72
LINS1-214ENST00000561308 TBC1D2Q9BYX2 928 aa10.56□□□□□ -0.72
LINS1-214ENST00000561308 ATP13A2Q9NQ11 1180 aa10.56□□□□□ -0.72
LINS1-214ENST00000561308 TRIM66O15016 1216 aa10.55□□□□□ -0.72
LINS1-214ENST00000561308 ALDH1A1P00352 501 aa10.55□□□□□ -0.72
LINS1-214ENST00000561308 DIXDC1Q155Q3 683 aa10.55□□□□□ -0.72
LINS1-214ENST00000561308 TREML4Q6UXN2 200 aa10.55□□□□□ -0.72
LINS1-214ENST00000561308 EVA1BQ9NVM1 165 aa10.55□□□□□ -0.72
LINS1-214ENST00000561308 ZCCHC6Q5VYS8 1495 aaKnown RBP10.54□□□□□ -0.72
LINS1-214ENST00000561308 GJA5P36382 358 aa10.54□□□□□ -0.72
LINS1-214ENST00000561308 AK7Q96M32 723 aa10.54□□□□□ -0.72
LINS1-214ENST00000561308 SIAH2O43255 324 aa10.53□□□□□ -0.72
LINS1-214ENST00000561308 SH3BP2P78314 561 aa10.53□□□□□ -0.72
LINS1-214ENST00000561308 DESI1Q6ICB0 168 aa10.53□□□□□ -0.72
LINS1-214ENST00000561308 UNC93B1Q9H1C4 597 aa10.53□□□□□ -0.72
LINS1-214ENST00000561308 KCNH2Q12809 1159 aa10.52□□□□□ -0.73
LINS1-214ENST00000561308 RSBN1LQ6PCB5 846 aaPredicted RBP10.52□□□□□ -0.73
LINS1-214ENST00000561308 SENP2Q9HC62 589 aa10.51□□□□□ -0.73
LINS1-214ENST00000561308 LINC01559Q495D7 138 aa10.5□□□□□ -0.73
LINS1-214ENST00000561308 BAP1Q92560 729 aa10.5□□□□□ -0.73
LINS1-214ENST00000561308 SPTLC1O15269 473 aa10.49□□□□□ -0.73
LINS1-214ENST00000561308 LCE2AQ5TA79 106 aaPredicted RBP10.49□□□□□ -0.73
LINS1-214ENST00000561308 TRIM47Q96LD4 638 aa10.49□□□□□ -0.73
LINS1-214ENST00000561308 PCDHB15Q9Y5E8 787 aa10.49□□□□□ -0.73
LINS1-214ENST00000561308 WASF2Q9Y6W5 498 aa10.49□□□□□ -0.73
LINS1-214ENST00000561308 ABCC9O60706 1549 aa10.48□□□□□ -0.73
LINS1-214ENST00000561308 SNRPBP14678 240 aaKnown RBP10.48□□□□□ -0.73
LINS1-214ENST00000561308 ZBTB3Q9H5J0 574 aa10.47□□□□□ -0.73
LINS1-214ENST00000561308 WFS1O76024 890 aa10.47□□□□□ -0.73
LINS1-214ENST00000561308 RIC3Q7Z5B4 369 aa10.47□□□□□ -0.73
LINS1-214ENST00000561308 ZNF511Q8NB15 262 aa10.47□□□□□ -0.73
LINS1-214ENST00000561308 CFAP99D6REC4 459 aa10.46□□□□□ -0.74
LINS1-214ENST00000561308 HRCP23327 699 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms