RNA–Protein interactions for RNA: ENST00000560744.1

AP001007.3-201, humanhuman

TSL 5 BASIC

Gene AP001007.3, Length 356 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001007.3-201ENST00000560744 SPDYE4A6NLX3 237 aa8.77□□□□□ -1.01
AP001007.3-201ENST00000560744 ATF3P18847 181 aa8.77□□□□□ -1.01
AP001007.3-201ENST00000560744 SPATA31E1Q6ZUB1 1445 aa8.77□□□□□ -1.01
AP001007.3-201ENST00000560744 ROBO1Q9Y6N7 1651 aa8.76□□□□□ -1.01
AP001007.3-201ENST00000560744 CADPS2Q86UW7 1296 aa8.76□□□□□ -1.01
AP001007.3-201ENST00000560744 MED1Q15648 1581 aaPredicted RBP8.76□□□□□ -1.01
AP001007.3-201ENST00000560744 XRN1Q8IZH2 1706 aaKnown RBP8.76□□□□□ -1.01
AP001007.3-201ENST00000560744 ADGRF5Q8IZF2 1346 aa8.76□□□□□ -1.01
AP001007.3-201ENST00000560744 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.75□□□□□ -1.01
AP001007.3-201ENST00000560744 PPLO60437 1756 aa8.75□□□□□ -1.01
AP001007.3-201ENST00000560744 ZNF316A6NFI3 1004 aaPredicted RBP8.74□□□□□ -1.01
AP001007.3-201ENST00000560744 SPDYE1Q8NFV5 336 aaPredicted RBP8.74□□□□□ -1.01
AP001007.3-201ENST00000560744 ANKRD30BQ9BXX2 1392 aa8.73□□□□□ -1.01
AP001007.3-201ENST00000560744 ROBO2Q9HCK4 1378 aa8.73□□□□□ -1.01
AP001007.3-201ENST00000560744 SETD1AO15047 1707 aaKnown RBP8.73□□□□□ -1.01
AP001007.3-201ENST00000560744 ADGRL3Q9HAR2 1447 aa8.72□□□□□ -1.01
AP001007.3-201ENST00000560744 DIEXFQ68CQ4 756 aaKnown RBP8.72□□□□□ -1.01
AP001007.3-201ENST00000560744 TMEM132EQ6IEE7 984 aa8.72□□□□□ -1.01
AP001007.3-201ENST00000560744 CHRDL2Q6WN34 429 aa8.72□□□□□ -1.01
AP001007.3-201ENST00000560744 BRINP3Q76B58 766 aa8.72□□□□□ -1.01
AP001007.3-201ENST00000560744 DCCP43146 1447 aa8.71□□□□□ -1.01
AP001007.3-201ENST00000560744 STK26Q9P289 416 aa8.71□□□□□ -1.02
AP001007.3-201ENST00000560744 PHLPP1O60346 1717 aa8.71□□□□□ -1.02
AP001007.3-201ENST00000560744 MST1RQ04912 1400 aa8.71□□□□□ -1.02
AP001007.3-201ENST00000560744 PTCH1Q13635 1447 aa8.71□□□□□ -1.02
AP001007.3-201ENST00000560744 SOCS7O14512 581 aa8.7□□□□□ -1.02
AP001007.3-201ENST00000560744 IFT172Q9UG01 1749 aa8.7□□□□□ -1.02
AP001007.3-201ENST00000560744 JCADQ9P266 1359 aa8.7□□□□□ -1.02
AP001007.3-201ENST00000560744 PIK3C2GO75747 1445 aa8.7□□□□□ -1.02
AP001007.3-201ENST00000560744 PRAG1Q86YV5 1406 aa8.7□□□□□ -1.02
AP001007.3-201ENST00000560744 NALCNQ8IZF0 1738 aa8.69□□□□□ -1.02
AP001007.3-201ENST00000560744 CFAP70Q5T0N1 1121 aa8.69□□□□□ -1.02
AP001007.3-201ENST00000560744 WAPLQ7Z5K2 1190 aa8.69□□□□□ -1.02
AP001007.3-201ENST00000560744 C14orf93Q9H972 538 aaKnown RBP8.69□□□□□ -1.02
AP001007.3-201ENST00000560744 RGS17Q9UGC6 210 aaPredicted RBP8.69□□□□□ -1.02
AP001007.3-201ENST00000560744 LRPPRCP42704 1394 aaKnown RBP8.69□□□□□ -1.02
AP001007.3-201ENST00000560744 COL16A1Q07092 1604 aaPredicted RBP8.69□□□□□ -1.02
AP001007.3-201ENST00000560744 DDX17Q92841 729 aaKnown RBP8.68□□□□□ -1.02
AP001007.3-201ENST00000560744 ABCC11Q96J66 1382 aa8.68□□□□□ -1.02
AP001007.3-201ENST00000560744 ASXL1Q8IXJ9 1541 aa8.68□□□□□ -1.02
AP001007.3-201ENST00000560744 AHDC1Q5TGY3 1603 aaPredicted RBP8.68□□□□□ -1.02
AP001007.3-201ENST00000560744 C1orf167Q5SNV9 1468 aa8.67□□□□□ -1.02
AP001007.3-201ENST00000560744 ORAI2Q96SN7 254 aa8.67□□□□□ -1.02
AP001007.3-201ENST00000560744 NRXN1Q9ULB1 1477 aa8.67□□□□□ -1.02
AP001007.3-201ENST00000560744 PLEKHH1Q9ULM0 1364 aa8.67□□□□□ -1.02
AP001007.3-201ENST00000560744 CLEC11AQ9Y240 323 aa8.67□□□□□ -1.02
AP001007.3-201ENST00000560744 KDM2AQ9Y2K7 1162 aa8.67□□□□□ -1.02
AP001007.3-201ENST00000560744 MYOM2P54296 1465 aa8.66□□□□□ -1.02
AP001007.3-201ENST00000560744 TECPR2O15040 1411 aa8.66□□□□□ -1.02
AP001007.3-201ENST00000560744 YTHDC2Q9H6S0 1430 aaKnown RBP8.66□□□□□ -1.02
AP001007.3-201ENST00000560744 PITPNM1O00562 1244 aa8.66□□□□□ -1.02
AP001007.3-201ENST00000560744 DCAF11Q8TEB1 546 aa8.66□□□□□ -1.02
AP001007.3-201ENST00000560744 SPATA31A6Q5VVP1 1343 aa8.65□□□□□ -1.02
AP001007.3-201ENST00000560744 POTEAQ6S8J7 498 aa8.65□□□□□ -1.02
AP001007.3-201ENST00000560744 SIRT1Q96EB6 747 aa8.65□□□□□ -1.02
AP001007.3-201ENST00000560744 NUTM2FA1L443 756 aa8.64□□□□□ -1.03
AP001007.3-201ENST00000560744 NUTM2BA6NNL0 878 aaPredicted RBP8.64□□□□□ -1.03
AP001007.3-201ENST00000560744 NUTM2EB1AL46 878 aaPredicted RBP8.64□□□□□ -1.03
AP001007.3-201ENST00000560744 NUTM2AQ8IVF1 878 aaPredicted RBP8.64□□□□□ -1.03
AP001007.3-201ENST00000560744 LRRC59Q96AG4 307 aaKnown RBP8.64□□□□□ -1.03
AP001007.3-201ENST00000560744 LRP6O75581 1613 aa8.64□□□□□ -1.03
AP001007.3-201ENST00000560744 NHSL1Q5SYE7 1610 aa8.64□□□□□ -1.03
AP001007.3-201ENST00000560744 SAFB2Q14151 953 aaKnown RBP eCLIP8.63□□□□□ -1.03
AP001007.3-201ENST00000560744 ESCO1Q5FWF5 840 aa8.63□□□□□ -1.03
AP001007.3-201ENST00000560744 MEX3CQ5U5Q3 659 aaKnown RBP8.63□□□□□ -1.03
AP001007.3-201ENST00000560744 PRAM1Q96QH2 718 aa8.63□□□□□ -1.03
AP001007.3-201ENST00000560744 KNDC1Q76NI1 1749 aa8.63□□□□□ -1.03
AP001007.3-201ENST00000560744 SHPRHQ149N8 1683 aa8.62□□□□□ -1.03
AP001007.3-201ENST00000560744 SOS2Q07890 1332 aaPredicted RBP8.62□□□□□ -1.03
AP001007.3-201ENST00000560744 CDC42BPGQ6DT37 1551 aa8.62□□□□□ -1.03
AP001007.3-201ENST00000560744 STAC3Q96MF2 364 aa8.62□□□□□ -1.03
AP001007.3-201ENST00000560744 TIMELESSQ9UNS1 1208 aa8.62□□□□□ -1.03
AP001007.3-201ENST00000560744 LAMC1P11047 1609 aa8.62□□□□□ -1.03
AP001007.3-201ENST00000560744 PNPLA6Q8IY17 1366 aa8.61□□□□□ -1.03
AP001007.3-201ENST00000560744 FOXO3O43524 673 aa8.61□□□□□ -1.03
AP001007.3-201ENST00000560744 PRR29P0C7W0 189 aa8.61□□□□□ -1.03
AP001007.3-201ENST00000560744 XPCQ01831 940 aaPredicted RBP8.61□□□□□ -1.03
AP001007.3-201ENST00000560744 POTEHQ6S545 545 aa8.61□□□□□ -1.03
AP001007.3-201ENST00000560744 POGKQ9P215 609 aa8.61□□□□□ -1.03
AP001007.3-201ENST00000560744 TRAK1Q9UPV9 953 aa8.61□□□□□ -1.03
AP001007.3-201ENST00000560744 ADGRB1O14514 1584 aa8.61□□□□□ -1.03
AP001007.3-201ENST00000560744 FKBP8Q14318 412 aa8.6□□□□□ -1.03
AP001007.3-201ENST00000560744 DLC1Q96QB1 1528 aa8.59□□□□□ -1.03
AP001007.3-201ENST00000560744 NPHP3Q7Z494 1330 aa8.59□□□□□ -1.03
AP001007.3-201ENST00000560744 SIN3AQ96ST3 1273 aa8.59□□□□□ -1.03
AP001007.3-201ENST00000560744 MINK1Q8N4C8 1332 aaPredicted RBP8.58□□□□□ -1.04
AP001007.3-201ENST00000560744 FMN2Q9NZ56 1722 aa8.58□□□□□ -1.04
AP001007.3-201ENST00000560744 ADAMTS2O95450 1211 aa8.58□□□□□ -1.04
AP001007.3-201ENST00000560744 NEUROD1Q13562 356 aa8.58□□□□□ -1.04
AP001007.3-201ENST00000560744 ZNF772Q68DY9 489 aaPredicted RBP8.58□□□□□ -1.04
AP001007.3-201ENST00000560744 HIRIP3Q9BW71 556 aaPredicted RBP8.58□□□□□ -1.04
AP001007.3-201ENST00000560744 PHF8Q9UPP1 1060 aa8.58□□□□□ -1.04
AP001007.3-201ENST00000560744 PXDNQ92626 1479 aa8.57□□□□□ -1.04
AP001007.3-201ENST00000560744 AFF2P51816 1311 aa8.57□□□□□ -1.04
AP001007.3-201ENST00000560744 NBPF1Q3BBV0 1214 aa8.57□□□□□ -1.04
AP001007.3-201ENST00000560744 KRT28Q7Z3Y7 464 aa8.57□□□□□ -1.04
AP001007.3-201ENST00000560744 L3MBTL2Q969R5 705 aa8.57□□□□□ -1.04
AP001007.3-201ENST00000560744 C8orf37Q96NL8 207 aa8.57□□□□□ -1.04
AP001007.3-201ENST00000560744 CENPBP07199 599 aaPredicted RBP8.56□□□□□ -1.04
AP001007.3-201ENST00000560744 RGPD8O14715 1765 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms