RNA–Protein interactions for RNA: ENST00000560731.5

MARK3-222, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-222	ENST00000560731	ITSN2	Q9NZM3	1697 aa		11.39	□□□□□ -0.59
MARK3-222	ENST00000560731	RSPH4A	Q5TD94	716 aa		11.38	□□□□□ -0.59
MARK3-222	ENST00000560731	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.38	□□□□□ -0.59
MARK3-222	ENST00000560731	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
MARK3-222	ENST00000560731	ROCK1	Q13464	1354 aa		11.38	□□□□□ -0.59
MARK3-222	ENST00000560731	DHX57	Q6P158	1386 aa	Known RBP	11.38	□□□□□ -0.59
MARK3-222	ENST00000560731	CAMSAP2	Q08AD1	1489 aa		11.38	□□□□□ -0.59
MARK3-222	ENST00000560731	PLCH2	O75038	1416 aa		11.37	□□□□□ -0.59
MARK3-222	ENST00000560731	DAPK1	P53355	1430 aa		11.37	□□□□□ -0.59
MARK3-222	ENST00000560731	AKNA	Q7Z591	1439 aa		11.37	□□□□□ -0.59
MARK3-222	ENST00000560731	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.37	□□□□□ -0.59
MARK3-222	ENST00000560731	CDC42BPA	Q5VT25	1732 aa		11.37	□□□□□ -0.59
MARK3-222	ENST00000560731	WDR7	Q9Y4E6	1490 aa		11.37	□□□□□ -0.59
MARK3-222	ENST00000560731	NAIP	Q13075	1403 aa		11.36	□□□□□ -0.59
MARK3-222	ENST00000560731	NBPF3	Q9H094	633 aa		11.36	□□□□□ -0.59
MARK3-222	ENST00000560731	CHIC2	Q9UKJ5	165 aa		11.36	□□□□□ -0.59
MARK3-222	ENST00000560731	ACIN1	Q9UKV3	1341 aa	Known RBP	11.35	□□□□□ -0.59
MARK3-222	ENST00000560731	ASXL2	Q76L83	1435 aa		11.35	□□□□□ -0.59
MARK3-222	ENST00000560731	DNMT1	P26358	1616 aa	Known RBP	11.35	□□□□□ -0.59
MARK3-222	ENST00000560731	C6orf132	Q5T0Z8	1188 aa		11.35	□□□□□ -0.59
MARK3-222	ENST00000560731	EFCAB2	Q5VUJ9	269 aa		11.35	□□□□□ -0.59
MARK3-222	ENST00000560731	CYB5RL	Q6IPT4	315 aa		11.35	□□□□□ -0.59
MARK3-222	ENST00000560731	ZC3H15	Q8WU90	426 aa	Known RBP	11.35	□□□□□ -0.59
MARK3-222	ENST00000560731	DDX12P	Q92771	950 aa		11.35	□□□□□ -0.59
MARK3-222	ENST00000560731	MRPL50	Q8N5N7	158 aa	Known RBP	11.34	□□□□□ -0.59
MARK3-222	ENST00000560731	RRP7BP	Q9NSQ0	103 aa		11.34	□□□□□ -0.59
MARK3-222	ENST00000560731	MBD5	Q9P267	1494 aa		11.33	□□□□□ -0.6
MARK3-222	ENST00000560731	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
MARK3-222	ENST00000560731	KCTD12	Q96CX2	325 aa	Known RBP	11.33	□□□□□ -0.6
MARK3-222	ENST00000560731	RABGEF1	Q9UJ41	708 aa		11.33	□□□□□ -0.6
MARK3-222	ENST00000560731	PREX2	Q70Z35	1606 aa		11.33	□□□□□ -0.6
MARK3-222	ENST00000560731	KIAA1107	Q9UPP5	1409 aa		11.33	□□□□□ -0.6
MARK3-222	ENST00000560731	TTC37	Q6PGP7	1564 aa		11.33	□□□□□ -0.6
MARK3-222	ENST00000560731	CDC42BPB	Q9Y5S2	1711 aa		11.32	□□□□□ -0.6
MARK3-222	ENST00000560731	RIMBP3C	A6NJZ7	1639 aa		11.32	□□□□□ -0.6
MARK3-222	ENST00000560731	RIMBP3B	A6NNM3	1639 aa		11.32	□□□□□ -0.6
MARK3-222	ENST00000560731	RIMBP3	Q9UFD9	1639 aa		11.32	□□□□□ -0.6
MARK3-222	ENST00000560731	GOLGA8CP	A6NN73	597 aa		11.32	□□□□□ -0.6
MARK3-222	ENST00000560731	ONECUT3	O60422	494 aa	Predicted RBP	11.32	□□□□□ -0.6
MARK3-222	ENST00000560731	TSPY4	P0CV99	314 aa		11.32	□□□□□ -0.6
MARK3-222	ENST00000560731	TSPY10	P0CW01	314 aa		11.32	□□□□□ -0.6
MARK3-222	ENST00000560731	COL9A1	P20849	921 aa		11.32	□□□□□ -0.6
MARK3-222	ENST00000560731	MLLT3	P42568	568 aa	Predicted RBP	11.32	□□□□□ -0.6
MARK3-222	ENST00000560731	NCOA1	Q15788	1441 aa		11.32	□□□□□ -0.6
MARK3-222	ENST00000560731	PLEKHH2	Q8IVE3	1493 aa		11.32	□□□□□ -0.6
MARK3-222	ENST00000560731	ARAP3	Q8WWN8	1544 aa		11.31	□□□□□ -0.6
MARK3-222	ENST00000560731	ARHGEF5	Q12774	1597 aa		11.31	□□□□□ -0.6
MARK3-222	ENST00000560731	ADGRL2	O95490	1459 aa		11.31	□□□□□ -0.6
MARK3-222	ENST00000560731	EN1	Q05925	392 aa	Predicted RBP	11.3	□□□□□ -0.6
MARK3-222	ENST00000560731	RBM33	Q96EV2	1170 aa	Known RBP	11.3	□□□□□ -0.6
MARK3-222	ENST00000560731	ARHGAP5	Q13017	1502 aa		11.3	□□□□□ -0.6
MARK3-222	ENST00000560731	ANKRD30A	Q9BXX3	1397 aa		11.29	□□□□□ -0.6
MARK3-222	ENST00000560731	SAMD9L	Q8IVG5	1584 aa		11.29	□□□□□ -0.6
MARK3-222	ENST00000560731	SHANK2	Q9UPX8	1470 aa		11.29	□□□□□ -0.6
MARK3-222	ENST00000560731	ABCA9	Q8IUA7	1624 aa		11.28	□□□□□ -0.6
MARK3-222	ENST00000560731	MYO5C	Q9NQX4	1742 aa		11.28	□□□□□ -0.6
MARK3-222	ENST00000560731	MAP3K7	O43318	606 aa		11.27	□□□□□ -0.61
MARK3-222	ENST00000560731	PROX2	Q3B8N5	592 aa		11.27	□□□□□ -0.61
MARK3-222	ENST00000560731	LAPTM4B	Q86VI4	370 aa		11.27	□□□□□ -0.61
MARK3-222	ENST00000560731	C9orf84	Q5VXU9	1444 aa		11.26	□□□□□ -0.61
MARK3-222	ENST00000560731	CCDC141	Q6ZP82	1450 aa		11.26	□□□□□ -0.61
MARK3-222	ENST00000560731	MAPKBP1	O60336	1514 aa		11.26	□□□□□ -0.61
MARK3-222	ENST00000560731	WNT2B	Q93097	391 aa		11.26	□□□□□ -0.61
MARK3-222	ENST00000560731	GCC2	Q8IWJ2	1684 aa		11.26	□□□□□ -0.61
MARK3-222	ENST00000560731	ARHGEF12	Q9NZN5	1544 aa		11.25	□□□□□ -0.61
MARK3-222	ENST00000560731	RBM26	Q5T8P6	1007 aa	Known RBP	11.25	□□□□□ -0.61
MARK3-222	ENST00000560731	CROCC2	H7BZ55	1655 aa		11.24	□□□□□ -0.61
MARK3-222	ENST00000560731	GRXCR2	A6NFK2	248 aa		11.24	□□□□□ -0.61
MARK3-222	ENST00000560731	ZMYND10	O75800	440 aa		11.24	□□□□□ -0.61
MARK3-222	ENST00000560731	CERK	Q8TCT0	537 aa		11.24	□□□□□ -0.61
MARK3-222	ENST00000560731	KIAA1468	Q9P260	1216 aa		11.24	□□□□□ -0.61
MARK3-222	ENST00000560731	CD109	Q6YHK3	1445 aa		11.24	□□□□□ -0.61
MARK3-222	ENST00000560731	TRIM6-TRIM34	B2RNG4	842 aa		11.23	□□□□□ -0.61
MARK3-222	ENST00000560731	THSD4	Q6ZMP0	1018 aa		11.23	□□□□□ -0.61
MARK3-222	ENST00000560731	TRIM52	Q96A61	297 aa		11.23	□□□□□ -0.61
MARK3-222	ENST00000560731	FANCA	O15360	1455 aa		11.23	□□□□□ -0.61
MARK3-222	ENST00000560731	SYCP2	Q9BX26	1530 aa		11.23	□□□□□ -0.61
MARK3-222	ENST00000560731	MAST1	Q9Y2H9	1570 aa		11.23	□□□□□ -0.61
MARK3-222	ENST00000560731	KDM6B	O15054	1643 aa		11.23	□□□□□ -0.61
MARK3-222	ENST00000560731	ABCC1	P33527	1531 aa		11.22	□□□□□ -0.61
MARK3-222	ENST00000560731	ADGB	Q8N7X0	1667 aa		11.22	□□□□□ -0.61
MARK3-222	ENST00000560731	MPHOSPH9	Q99550	1183 aa		11.22	□□□□□ -0.61
MARK3-222	ENST00000560731	TIMELESS	Q9UNS1	1208 aa		11.22	□□□□□ -0.61
MARK3-222	ENST00000560731	TRAPPC8	Q9Y2L5	1435 aa		11.22	□□□□□ -0.61
MARK3-222	ENST00000560731	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.21	□□□□□ -0.61
MARK3-222	ENST00000560731	ANKRD50	Q9ULJ7	1429 aa		11.21	□□□□□ -0.61
MARK3-222	ENST00000560731	PTPN5	P54829	565 aa		11.21	□□□□□ -0.61
MARK3-222	ENST00000560731	GPIHBP1	Q8IV16	184 aa		11.21	□□□□□ -0.61
MARK3-222	ENST00000560731	ANKK1	Q8NFD2	765 aa		11.21	□□□□□ -0.61
MARK3-222	ENST00000560731	SLC24A3	Q9HC58	644 aa		11.21	□□□□□ -0.61
MARK3-222	ENST00000560731	PLA2G2E	Q9NZK7	142 aa		11.21	□□□□□ -0.61
MARK3-222	ENST00000560731	KIF15	Q9NS87	1388 aa		11.2	□□□□□ -0.62
MARK3-222	ENST00000560731	OSBP	P22059	807 aa		11.2	□□□□□ -0.62
MARK3-222	ENST00000560731	TSR1	Q2NL82	804 aa	Known RBP	11.2	□□□□□ -0.62
MARK3-222	ENST00000560731	PACS2	Q86VP3	889 aa		11.2	□□□□□ -0.62
MARK3-222	ENST00000560731	AFAP1	Q8N556	730 aa		11.2	□□□□□ -0.62
MARK3-222	ENST00000560731	GLI2	P10070	1586 aa		11.2	□□□□□ -0.62
MARK3-222	ENST00000560731	SCAPER	Q9BY12	1400 aa		11.19	□□□□□ -0.62
MARK3-222	ENST00000560731	BARGIN	Q6ZT62	677 aa		11.19	□□□□□ -0.62
MARK3-222	ENST00000560731	SPAG9	O60271	1321 aa	Known RBP	11.18	□□□□□ -0.62

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