RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 RGS12O14924 1447 aa15.93■□□□□ 0.14
CDC42BPB-207ENST00000560492 C1orf167Q5SNV9 1468 aa15.9■□□□□ 0.14
CDC42BPB-207ENST00000560492 USP21Q9UK80 565 aa15.87■□□□□ 0.13
CDC42BPB-207ENST00000560492 VGFO15240 615 aaPredicted RBP15.86■□□□□ 0.13
CDC42BPB-207ENST00000560492 ORAI2Q96SN7 254 aa15.86■□□□□ 0.13
CDC42BPB-207ENST00000560492 ATAD2Q6PL18 1390 aa15.86■□□□□ 0.13
CDC42BPB-207ENST00000560492 PTCH1Q13635 1447 aa15.85■□□□□ 0.13
CDC42BPB-207ENST00000560492 PPLO60437 1756 aa15.84■□□□□ 0.13
CDC42BPB-207ENST00000560492 ROBO2Q9HCK4 1378 aa15.84■□□□□ 0.13
CDC42BPB-207ENST00000560492 LAMC1P11047 1609 aa15.83■□□□□ 0.13
CDC42BPB-207ENST00000560492 TRPC5Q9UL62 973 aaPredicted RBP15.83■□□□□ 0.12
CDC42BPB-207ENST00000560492 ESCO1Q5FWF5 840 aa15.82■□□□□ 0.12
CDC42BPB-207ENST00000560492 MARF1Q9Y4F3 1742 aaKnown RBP15.82■□□□□ 0.12
CDC42BPB-207ENST00000560492 SOS2Q07890 1332 aaPredicted RBP15.81■□□□□ 0.12
CDC42BPB-207ENST00000560492 HFM1A2PYH4 1435 aa15.8■□□□□ 0.12
CDC42BPB-207ENST00000560492 SLC4A2P04920 1241 aa15.8■□□□□ 0.12
CDC42BPB-207ENST00000560492 SLC4A1APQ9BWU0 796 aaKnown RBP15.8■□□□□ 0.12
CDC42BPB-207ENST00000560492 COL22A1Q8NFW1 1626 aaPredicted RBP15.79■□□□□ 0.12
CDC42BPB-207ENST00000560492 NAIPQ13075 1403 aa15.79■□□□□ 0.12
CDC42BPB-207ENST00000560492 NPHP3Q7Z494 1330 aa15.79■□□□□ 0.12
CDC42BPB-207ENST00000560492 NUTM2FA1L443 756 aa15.79■□□□□ 0.12
CDC42BPB-207ENST00000560492 XPCQ01831 940 aaPredicted RBP15.79■□□□□ 0.12
CDC42BPB-207ENST00000560492 STK26Q9P289 416 aa15.78■□□□□ 0.12
CDC42BPB-207ENST00000560492 RPGRIP1LQ68CZ1 1315 aa15.77■□□□□ 0.12
CDC42BPB-207ENST00000560492 ZRANB1Q9UGI0 708 aa15.77■□□□□ 0.12
CDC42BPB-207ENST00000560492 CDC42BPGQ6DT37 1551 aa15.77■□□□□ 0.11
CDC42BPB-207ENST00000560492 ATRNO75882 1429 aa15.76■□□□□ 0.11
CDC42BPB-207ENST00000560492 FOXO3O43524 673 aa15.75■□□□□ 0.11
CDC42BPB-207ENST00000560492 FNBP4Q8N3X1 1017 aaPredicted RBP15.75■□□□□ 0.11
CDC42BPB-207ENST00000560492 PLEKHG5O94827 1062 aa15.74■□□□□ 0.11
CDC42BPB-207ENST00000560492 HAP1P54257 671 aaPredicted RBP15.74■□□□□ 0.11
CDC42BPB-207ENST00000560492 RGL3Q3MIN7 710 aa15.74■□□□□ 0.11
CDC42BPB-207ENST00000560492 RRBP1Q9P2E9 1410 aaKnown RBP15.74■□□□□ 0.11
CDC42BPB-207ENST00000560492 LRPPRCP42704 1394 aaKnown RBP15.74■□□□□ 0.11
CDC42BPB-207ENST00000560492 MYOM2P54296 1465 aa15.73■□□□□ 0.11
CDC42BPB-207ENST00000560492 PXDNQ92626 1479 aa15.72■□□□□ 0.11
CDC42BPB-207ENST00000560492 PRAG1Q86YV5 1406 aa15.72■□□□□ 0.11
CDC42BPB-207ENST00000560492 SPINK5Q9NQ38 1064 aaPredicted RBP15.72■□□□□ 0.11
CDC42BPB-207ENST00000560492 EP400Q96L91 3159 aa15.71■□□□□ 0.11
CDC42BPB-207ENST00000560492 WAPLQ7Z5K2 1190 aa15.71■□□□□ 0.11
CDC42BPB-207ENST00000560492 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.71■□□□□ 0.1
CDC42BPB-207ENST00000560492 ADGRF5Q8IZF2 1346 aa15.7■□□□□ 0.1
CDC42BPB-207ENST00000560492 KIF1AQ12756 1690 aa15.7■□□□□ 0.1
CDC42BPB-207ENST00000560492 CCDC144AA2RUR9 1427 aa15.7■□□□□ 0.1
CDC42BPB-207ENST00000560492 GJD4Q96KN9 370 aaPredicted RBP15.7■□□□□ 0.1
CDC42BPB-207ENST00000560492 KNDC1Q76NI1 1749 aa15.7■□□□□ 0.1
CDC42BPB-207ENST00000560492 FMN2Q9NZ56 1722 aa15.7■□□□□ 0.1
CDC42BPB-207ENST00000560492 IFT172Q9UG01 1749 aa15.7■□□□□ 0.1
CDC42BPB-207ENST00000560492 RGPD8O14715 1765 aaPredicted RBP15.7■□□□□ 0.1
CDC42BPB-207ENST00000560492 BCL9LQ86UU0 1499 aa15.69■□□□□ 0.1
CDC42BPB-207ENST00000560492 BRWD3Q6RI45 1802 aa15.68■□□□□ 0.1
CDC42BPB-207ENST00000560492 TMEM132EQ6IEE7 984 aa15.68■□□□□ 0.1
CDC42BPB-207ENST00000560492 CCDC125Q86Z20 511 aa15.68■□□□□ 0.1
CDC42BPB-207ENST00000560492 CCDC9Q9Y3X0 531 aaKnown RBP15.68■□□□□ 0.1
CDC42BPB-207ENST00000560492 SRCAPQ6ZRS2 3230 aa15.68■□□□□ 0.1
CDC42BPB-207ENST00000560492 SF3B2Q13435 895 aaKnown RBP15.67■□□□□ 0.1
CDC42BPB-207ENST00000560492 LMOD2Q6P5Q4 547 aa15.67■□□□□ 0.1
CDC42BPB-207ENST00000560492 USP32Q8NFA0 1604 aa15.67■□□□□ 0.1
CDC42BPB-207ENST00000560492 A0A0G2JS52 829 aa15.66■□□□□ 0.1
CDC42BPB-207ENST00000560492 MYT1Q01538 1121 aa15.66■□□□□ 0.1
CDC42BPB-207ENST00000560492 UNC5CLQ8IV45 518 aa15.66■□□□□ 0.1
CDC42BPB-207ENST00000560492 PLEKHH1Q9ULM0 1364 aa15.65■□□□□ 0.1
CDC42BPB-207ENST00000560492 KRT28Q7Z3Y7 464 aa15.65■□□□□ 0.1
CDC42BPB-207ENST00000560492 GLI3P10071 1580 aa15.65■□□□□ 0.1
CDC42BPB-207ENST00000560492 RALGAPBQ86X10 1494 aa15.65■□□□□ 0.1
CDC42BPB-207ENST00000560492 ANKRD30BQ9BXX2 1392 aa15.64■□□□□ 0.09
CDC42BPB-207ENST00000560492 PLCH1Q4KWH8 1693 aa15.64■□□□□ 0.09
CDC42BPB-207ENST00000560492 SPATA31A3Q5VYP0 1347 aa15.64■□□□□ 0.09
CDC42BPB-207ENST00000560492 TECPR2O15040 1411 aa15.63■□□□□ 0.09
CDC42BPB-207ENST00000560492 BLMP54132 1417 aaPredicted RBP15.62■□□□□ 0.09
CDC42BPB-207ENST00000560492 YTHDC2Q9H6S0 1430 aaKnown RBP15.62■□□□□ 0.09
CDC42BPB-207ENST00000560492 CAPN15O75808 1086 aa15.62■□□□□ 0.09
CDC42BPB-207ENST00000560492 PSME1Q06323 249 aa15.62■□□□□ 0.09
CDC42BPB-207ENST00000560492 SAFB2Q14151 953 aaKnown RBP eCLIP15.62■□□□□ 0.09
CDC42BPB-207ENST00000560492 SLIT2O94813 1529 aa15.62■□□□□ 0.09
CDC42BPB-207ENST00000560492 ABCC11Q96J66 1382 aa15.62■□□□□ 0.09
CDC42BPB-207ENST00000560492 CABLES1Q8TDN4 633 aa15.61■□□□□ 0.09
CDC42BPB-207ENST00000560492 PHF8Q9UPP1 1060 aa15.61■□□□□ 0.09
CDC42BPB-207ENST00000560492 TNS3Q68CZ2 1445 aa15.6■□□□□ 0.09
CDC42BPB-207ENST00000560492 ABCA3Q99758 1704 aa15.6■□□□□ 0.09
CDC42BPB-207ENST00000560492 NWD2Q9ULI1 1742 aa15.6■□□□□ 0.09
CDC42BPB-207ENST00000560492 DEFB132Q7Z7B7 95 aa15.6■□□□□ 0.09
CDC42BPB-207ENST00000560492 SEPT12Q8IYM1 358 aa15.6■□□□□ 0.09
CDC42BPB-207ENST00000560492 PIK3C2GO75747 1445 aa15.6■□□□□ 0.09
CDC42BPB-207ENST00000560492 SPATA31E1Q6ZUB1 1445 aa15.6■□□□□ 0.09
CDC42BPB-207ENST00000560492 MPHOSPH9Q99550 1183 aa15.59■□□□□ 0.09
CDC42BPB-207ENST00000560492 DSG3P32926 999 aa15.58■□□□□ 0.08
CDC42BPB-207ENST00000560492 POGKQ9P215 609 aa15.57■□□□□ 0.08
CDC42BPB-207ENST00000560492 DHX57Q6P158 1386 aaKnown RBP15.57■□□□□ 0.08
CDC42BPB-207ENST00000560492 VPS72Q15906 364 aa15.56■□□□□ 0.08
CDC42BPB-207ENST00000560492 PMFBP1Q8TBY8 1022 aa15.56■□□□□ 0.08
CDC42BPB-207ENST00000560492 ARHGEF10O15013 1369 aa15.55■□□□□ 0.08
CDC42BPB-207ENST00000560492 KRT27Q7Z3Y8 459 aa15.55■□□□□ 0.08
CDC42BPB-207ENST00000560492 PRAM1Q96QH2 718 aa15.55■□□□□ 0.08
CDC42BPB-207ENST00000560492 NRXN1Q9ULB1 1477 aa15.54■□□□□ 0.08
CDC42BPB-207ENST00000560492 CFAP70Q5T0N1 1121 aa15.54■□□□□ 0.08
CDC42BPB-207ENST00000560492 BAG6P46379 1132 aa15.53■□□□□ 0.08
CDC42BPB-207ENST00000560492 SBNO1A3KN83 1393 aa15.52■□□□□ 0.08
CDC42BPB-207ENST00000560492 FAM98CQ17RN3 349 aaKnown RBP15.52■□□□□ 0.08
CDC42BPB-207ENST00000560492 C14orf93Q9H972 538 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms