RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 SOS2Q07890 1332 aaPredicted RBP10.76□□□□□ -0.69
HERC1-208ENST00000560462 COL22A1Q8NFW1 1626 aaPredicted RBP10.76□□□□□ -0.69
HERC1-208ENST00000560462 ARHGAP31Q2M1Z3 1444 aa10.75□□□□□ -0.69
HERC1-208ENST00000560462 A0A0G2JS52 829 aa10.75□□□□□ -0.69
HERC1-208ENST00000560462 MYT1Q01538 1121 aa10.75□□□□□ -0.69
HERC1-208ENST00000560462 IDI1Q13907 227 aa10.75□□□□□ -0.69
HERC1-208ENST00000560462 PARD3Q8TEW0 1356 aa10.74□□□□□ -0.69
HERC1-208ENST00000560462 SLIT2O94813 1529 aa10.74□□□□□ -0.69
HERC1-208ENST00000560462 CEP152O94986 1710 aa10.73□□□□□ -0.69
HERC1-208ENST00000560462 FAM83GA6ND36 823 aa10.73□□□□□ -0.69
HERC1-208ENST00000560462 VPS72Q15906 364 aa10.72□□□□□ -0.69
HERC1-208ENST00000560462 CCDC9Q9Y3X0 531 aaKnown RBP10.72□□□□□ -0.69
HERC1-208ENST00000560462 PIK3R4Q99570 1358 aa10.72□□□□□ -0.69
HERC1-208ENST00000560462 ADGRB3O60242 1522 aa10.72□□□□□ -0.69
HERC1-208ENST00000560462 ADGRB2O60241 1585 aa10.72□□□□□ -0.69
HERC1-208ENST00000560462 MARF1Q9Y4F3 1742 aaKnown RBP10.72□□□□□ -0.69
HERC1-208ENST00000560462 LAMC1P11047 1609 aa10.71□□□□□ -0.69
HERC1-208ENST00000560462 RPRD2Q5VT52 1461 aaKnown RBP10.71□□□□□ -0.69
HERC1-208ENST00000560462 CCDC141Q6ZP82 1450 aa10.71□□□□□ -0.69
HERC1-208ENST00000560462 TNS1Q9HBL0 1735 aaKnown RBP10.7□□□□□ -0.7
HERC1-208ENST00000560462 MTUS2Q5JR59 1369 aa10.7□□□□□ -0.7
HERC1-208ENST00000560462 PLCB2Q00722 1185 aa10.7□□□□□ -0.7
HERC1-208ENST00000560462 FAM182BQ5T319 152 aa10.7□□□□□ -0.7
HERC1-208ENST00000560462 ZNF219Q9P2Y4 722 aaPredicted RBP10.7□□□□□ -0.7
HERC1-208ENST00000560462 AMOTL2Q9Y2J4 779 aa10.7□□□□□ -0.7
HERC1-208ENST00000560462 NRKQ7Z2Y5 1582 aa10.69□□□□□ -0.7
HERC1-208ENST00000560462 TRPM2O94759 1503 aa10.69□□□□□ -0.7
HERC1-208ENST00000560462 HDGFP51858 240 aaKnown RBP10.69□□□□□ -0.7
HERC1-208ENST00000560462 SYT17Q9BSW7 474 aa10.69□□□□□ -0.7
HERC1-208ENST00000560462 ZFYVE9O95405 1425 aa10.68□□□□□ -0.7
HERC1-208ENST00000560462 APBA3O96018 575 aa10.68□□□□□ -0.7
HERC1-208ENST00000560462 CACNB1Q02641 598 aaPredicted RBP10.68□□□□□ -0.7
HERC1-208ENST00000560462 APLP2Q06481 763 aa10.68□□□□□ -0.7
HERC1-208ENST00000560462 FHDC1Q9C0D6 1143 aaPredicted RBP10.68□□□□□ -0.7
HERC1-208ENST00000560462 EHBP1L1Q8N3D4 1523 aa10.68□□□□□ -0.7
HERC1-208ENST00000560462 C1orf167Q5SNV9 1468 aa10.68□□□□□ -0.7
HERC1-208ENST00000560462 SHANK3Q9BYB0 1731 aa10.67□□□□□ -0.7
HERC1-208ENST00000560462 ADAMTS13Q76LX8 1427 aa10.67□□□□□ -0.7
HERC1-208ENST00000560462 EIF2AK4Q9P2K8 1649 aaKnown RBP10.66□□□□□ -0.7
HERC1-208ENST00000560462 RSPH4AQ5TD94 716 aa10.66□□□□□ -0.7
HERC1-208ENST00000560462 ADGRL3Q9HAR2 1447 aa10.66□□□□□ -0.7
HERC1-208ENST00000560462 RIMS2Q9UQ26 1411 aa10.66□□□□□ -0.7
HERC1-208ENST00000560462 TRIM37O94972 964 aa10.65□□□□□ -0.7
HERC1-208ENST00000560462 FAM98CQ17RN3 349 aaKnown RBP10.65□□□□□ -0.7
HERC1-208ENST00000560462 ORAI2Q96SN7 254 aa10.65□□□□□ -0.7
HERC1-208ENST00000560462 MYOM1P52179 1685 aa10.65□□□□□ -0.7
HERC1-208ENST00000560462 CASKIN1Q8WXD9 1431 aa10.65□□□□□ -0.7
HERC1-208ENST00000560462 NUP188Q5SRE5 1749 aa10.64□□□□□ -0.71
HERC1-208ENST00000560462 RREB1Q92766 1687 aa10.64□□□□□ -0.71
HERC1-208ENST00000560462 TSPY4P0CV99 314 aa10.64□□□□□ -0.71
HERC1-208ENST00000560462 TSPY10P0CW01 314 aa10.64□□□□□ -0.71
HERC1-208ENST00000560462 GPR162Q16538 588 aa10.64□□□□□ -0.71
HERC1-208ENST00000560462 NOS1P29475 1434 aa10.64□□□□□ -0.71
HERC1-208ENST00000560462 PTPRUQ92729 1446 aa10.64□□□□□ -0.71
HERC1-208ENST00000560462 DLC1Q96QB1 1528 aa10.63□□□□□ -0.71
HERC1-208ENST00000560462 SPDYE4A6NLX3 237 aa10.63□□□□□ -0.71
HERC1-208ENST00000560462 PROM2Q8N271 834 aa10.63□□□□□ -0.71
HERC1-208ENST00000560462 PTGER2P43116 358 aa10.62□□□□□ -0.71
HERC1-208ENST00000560462 APLP1P51693 650 aa10.62□□□□□ -0.71
HERC1-208ENST00000560462 DNAJC5GQ8N7S2 189 aa10.62□□□□□ -0.71
HERC1-208ENST00000560462 RNF39Q9H2S5 420 aa10.62□□□□□ -0.71
HERC1-208ENST00000560462 SLC52A1Q9NWF4 448 aa10.62□□□□□ -0.71
HERC1-208ENST00000560462 ZBTB7AO95365 584 aa10.61□□□□□ -0.71
HERC1-208ENST00000560462 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.61□□□□□ -0.71
HERC1-208ENST00000560462 WWC3Q9ULE0 1092 aa10.61□□□□□ -0.71
HERC1-208ENST00000560462 TMEM131LA2VDJ0 1609 aa10.61□□□□□ -0.71
HERC1-208ENST00000560462 NPHP3Q7Z494 1330 aa10.6□□□□□ -0.71
HERC1-208ENST00000560462 GOLGB1Q14789 3259 aaKnown RBP10.6□□□□□ -0.71
HERC1-208ENST00000560462 FAM196AQ6ZSG2 479 aa10.6□□□□□ -0.71
HERC1-208ENST00000560462 GPBP1L1Q9HC44 474 aaPredicted RBP10.6□□□□□ -0.71
HERC1-208ENST00000560462 FYCO1Q9BQS8 1478 aa10.6□□□□□ -0.71
HERC1-208ENST00000560462 USP32Q8NFA0 1604 aa10.58□□□□□ -0.72
HERC1-208ENST00000560462 AATKQ6ZMQ8 1374 aa10.58□□□□□ -0.72
HERC1-208ENST00000560462 VASPP50552 380 aaPredicted RBP10.58□□□□□ -0.72
HERC1-208ENST00000560462 XRN1Q8IZH2 1706 aaKnown RBP10.58□□□□□ -0.72
HERC1-208ENST00000560462 ATP10DQ9P241 1426 aa10.58□□□□□ -0.72
HERC1-208ENST00000560462 PXDNQ92626 1479 aa10.57□□□□□ -0.72
HERC1-208ENST00000560462 PTPN23Q9H3S7 1636 aa10.57□□□□□ -0.72
HERC1-208ENST00000560462 CASZ1Q86V15 1759 aa10.57□□□□□ -0.72
HERC1-208ENST00000560462 ADGRL2O95490 1459 aa10.56□□□□□ -0.72
HERC1-208ENST00000560462 NALCNQ8IZF0 1738 aa10.56□□□□□ -0.72
HERC1-208ENST00000560462 NWD2Q9ULI1 1742 aa10.56□□□□□ -0.72
HERC1-208ENST00000560462 HAP1P54257 671 aaPredicted RBP10.56□□□□□ -0.72
HERC1-208ENST00000560462 XPCQ01831 940 aaPredicted RBP10.56□□□□□ -0.72
HERC1-208ENST00000560462 C1QBPQ07021 282 aaKnown RBP10.56□□□□□ -0.72
HERC1-208ENST00000560462 PDGFDQ9GZP0 370 aaPredicted RBP10.56□□□□□ -0.72
HERC1-208ENST00000560462 KANK1Q14678 1352 aa10.55□□□□□ -0.72
HERC1-208ENST00000560462 PLCH1Q4KWH8 1693 aa10.55□□□□□ -0.72
HERC1-208ENST00000560462 MAP3K5Q99683 1374 aa10.54□□□□□ -0.72
HERC1-208ENST00000560462 ARHGEF5Q12774 1597 aa10.54□□□□□ -0.72
HERC1-208ENST00000560462 PELP1Q8IZL8 1130 aaKnown RBP10.54□□□□□ -0.72
HERC1-208ENST00000560462 EEA1Q15075 1411 aa10.53□□□□□ -0.72
HERC1-208ENST00000560462 UBTFP17480 764 aaKnown RBP10.53□□□□□ -0.72
HERC1-208ENST00000560462 JMYQ8N9B5 988 aa10.53□□□□□ -0.72
HERC1-208ENST00000560462 NEXMIFQ5QGS0 1516 aa10.53□□□□□ -0.72
HERC1-208ENST00000560462 ABCC5O15440 1437 aa10.52□□□□□ -0.73
HERC1-208ENST00000560462 FOXO3O43524 673 aa10.52□□□□□ -0.73
HERC1-208ENST00000560462 ARXQ96QS3 562 aa10.52□□□□□ -0.73
HERC1-208ENST00000560462 ANO8Q9HCE9 1232 aaPredicted RBP10.52□□□□□ -0.73
HERC1-208ENST00000560462 PCNTO95613 3336 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms