RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 CCDC97Q96F63 343 aaPredicted RBP7.97□□□□□ -1.13
TPM1-222ENST00000560131 PXYLP1Q8TE99 480 aa7.96□□□□□ -1.14
TPM1-222ENST00000560131 ACIN1Q9UKV3 1341 aaKnown RBP7.96□□□□□ -1.14
TPM1-222ENST00000560131 CLK2P49760 499 aaKnown RBP7.95□□□□□ -1.14
TPM1-222ENST00000560131 FAM161AQ3B820 660 aa7.95□□□□□ -1.14
TPM1-222ENST00000560131 NECTIN2Q92692 538 aa7.95□□□□□ -1.14
TPM1-222ENST00000560131 COG6Q9Y2V7 657 aa7.95□□□□□ -1.14
TPM1-222ENST00000560131 ADGRG1Q9Y653 693 aa7.95□□□□□ -1.14
TPM1-222ENST00000560131 TMEM259Q4ZIN3 620 aa7.94□□□□□ -1.14
TPM1-222ENST00000560131 TRAIPQ9BWF2 469 aa7.94□□□□□ -1.14
TPM1-222ENST00000560131 CCDC9Q9Y3X0 531 aaKnown RBP7.94□□□□□ -1.14
TPM1-222ENST00000560131 LOC100996750A0A140TA64 210 aa7.93□□□□□ -1.14
TPM1-222ENST00000560131 RFC5P40937 340 aa7.93□□□□□ -1.14
TPM1-222ENST00000560131 SLC19A1P41440 591 aa7.93□□□□□ -1.14
TPM1-222ENST00000560131 PADI6Q6TGC4 694 aa7.93□□□□□ -1.14
TPM1-222ENST00000560131 NLRP7Q8WX94 980 aa7.93□□□□□ -1.14
TPM1-222ENST00000560131 KRTAP4-6Q9BYQ5 205 aa7.93□□□□□ -1.14
TPM1-222ENST00000560131 TBC1D2Q9BYX2 928 aa7.93□□□□□ -1.14
TPM1-222ENST00000560131 TSKSQ9UJT2 592 aa7.93□□□□□ -1.14
TPM1-222ENST00000560131 PRR20EP86478 221 aa7.92□□□□□ -1.14
TPM1-222ENST00000560131 PRR20CP86479 221 aa7.92□□□□□ -1.14
TPM1-222ENST00000560131 PRR20DP86480 221 aa7.92□□□□□ -1.14
TPM1-222ENST00000560131 PRR20BP86481 221 aa7.92□□□□□ -1.14
TPM1-222ENST00000560131 PRR20AP86496 221 aa7.92□□□□□ -1.14
TPM1-222ENST00000560131 PPP2R2DQ66LE6 453 aa7.92□□□□□ -1.14
TPM1-222ENST00000560131 TTC13Q8NBP0 860 aa7.92□□□□□ -1.14
TPM1-222ENST00000560131 SNRKQ9NRH2 765 aa7.92□□□□□ -1.14
TPM1-222ENST00000560131 RBM27Q9P2N5 1060 aaKnown RBP7.92□□□□□ -1.14
TPM1-222ENST00000560131 ZNF330Q9Y3S2 320 aaPredicted RBP7.92□□□□□ -1.14
TPM1-222ENST00000560131 WFS1O76024 890 aa7.91□□□□□ -1.14
TPM1-222ENST00000560131 INSM1Q01101 510 aaPredicted RBP7.9□□□□□ -1.14
TPM1-222ENST00000560131 KCTD17Q8N5Z5 321 aa7.9□□□□□ -1.14
TPM1-222ENST00000560131 FAM187AA6NFU0 413 aa7.89□□□□□ -1.15
TPM1-222ENST00000560131 CENPBP07199 599 aaPredicted RBP7.89□□□□□ -1.15
TPM1-222ENST00000560131 APLP1P51693 650 aa7.89□□□□□ -1.15
TPM1-222ENST00000560131 TUSC1Q2TAM9 212 aa7.89□□□□□ -1.15
TPM1-222ENST00000560131 SPRYD7Q5W111 196 aa7.89□□□□□ -1.15
TPM1-222ENST00000560131 ZNF598Q86UK7 904 aaKnown RBP7.89□□□□□ -1.15
TPM1-222ENST00000560131 RBM46Q8TBY0 533 aaKnown RBP7.89□□□□□ -1.15
TPM1-222ENST00000560131 SMAPO00193 183 aa7.88□□□□□ -1.15
TPM1-222ENST00000560131 HDGFP51858 240 aaKnown RBP7.88□□□□□ -1.15
TPM1-222ENST00000560131 RIC3Q7Z5B4 369 aa7.88□□□□□ -1.15
TPM1-222ENST00000560131 PRSS12P56730 875 aa7.87□□□□□ -1.15
TPM1-222ENST00000560131 FBXO31Q5XUX0 539 aaPredicted RBP7.87□□□□□ -1.15
TPM1-222ENST00000560131 WWC1Q8IX03 1113 aa7.87□□□□□ -1.15
TPM1-222ENST00000560131 SPIRE2Q8WWL2 714 aa7.87□□□□□ -1.15
TPM1-222ENST00000560131 AAASQ9NRG9 546 aa7.87□□□□□ -1.15
TPM1-222ENST00000560131 LIMD1Q9UGP4 676 aa7.87□□□□□ -1.15
TPM1-222ENST00000560131 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.86□□□□□ -1.15
TPM1-222ENST00000560131 WIPF1O43516 503 aa7.86□□□□□ -1.15
TPM1-222ENST00000560131 COPS2P61201 443 aa7.86□□□□□ -1.15
TPM1-222ENST00000560131 LOC105371045A0A1W2PR82 267 aa7.85□□□□□ -1.15
TPM1-222ENST00000560131 SPTLC1O15269 473 aa7.85□□□□□ -1.15
TPM1-222ENST00000560131 ST8SIA5O15466 376 aa7.85□□□□□ -1.15
TPM1-222ENST00000560131 RNF40O75150 1001 aa7.85□□□□□ -1.15
TPM1-222ENST00000560131 EMID1Q96A84 441 aaPredicted RBP7.85□□□□□ -1.15
TPM1-222ENST00000560131 CDCA7LQ96GN5 454 aa7.85□□□□□ -1.15
TPM1-222ENST00000560131 PRM3Q9NNZ6 103 aa7.85□□□□□ -1.15
TPM1-222ENST00000560131 RNF223E7ERA6 249 aa7.84□□□□□ -1.15
TPM1-222ENST00000560131 SOCS7O14512 581 aa7.84□□□□□ -1.15
TPM1-222ENST00000560131 ZPR1O75312 459 aa7.84□□□□□ -1.15
TPM1-222ENST00000560131 MTMR14Q8NCE2 650 aa7.84□□□□□ -1.15
TPM1-222ENST00000560131 GDPD2Q9HCC8 539 aa7.84□□□□□ -1.15
TPM1-222ENST00000560131 ABCC9O60706 1549 aa7.83□□□□□ -1.16
TPM1-222ENST00000560131 RCCD1A6NED2 376 aa7.83□□□□□ -1.16
TPM1-222ENST00000560131 PPP1R15AO75807 674 aaPredicted RBP7.83□□□□□ -1.16
TPM1-222ENST00000560131 CD46P15529 392 aa7.83□□□□□ -1.16
TPM1-222ENST00000560131 NUTM1Q86Y26 1132 aa7.83□□□□□ -1.16
TPM1-222ENST00000560131 AEBP1Q8IUX7 1158 aa7.83□□□□□ -1.16
TPM1-222ENST00000560131 TATDN2Q93075 761 aa7.83□□□□□ -1.16
TPM1-222ENST00000560131 NBPF26B4DH59 902 aa7.82□□□□□ -1.16
TPM1-222ENST00000560131 GDF9O60383 454 aa7.82□□□□□ -1.16
TPM1-222ENST00000560131 GJA5P36382 358 aa7.82□□□□□ -1.16
TPM1-222ENST00000560131 NEUROD1Q13562 356 aa7.82□□□□□ -1.16
TPM1-222ENST00000560131 ZNF697Q5TEC3 545 aa7.82□□□□□ -1.16
TPM1-222ENST00000560131 RSBN1LQ6PCB5 846 aaPredicted RBP7.82□□□□□ -1.16
TPM1-222ENST00000560131 SULF1Q8IWU6 871 aa7.82□□□□□ -1.16
TPM1-222ENST00000560131 RETREG2Q8NC44 543 aa7.82□□□□□ -1.16
TPM1-222ENST00000560131 EYA1Q99502 592 aa7.82□□□□□ -1.16
TPM1-222ENST00000560131 PNMA3Q9UL41 463 aa7.82□□□□□ -1.16
TPM1-222ENST00000560131 TNFRSF10AO00220 468 aa7.81□□□□□ -1.16
TPM1-222ENST00000560131 CALR3Q96L12 384 aaKnown RBP7.81□□□□□ -1.16
TPM1-222ENST00000560131 FAM198AQ9UFP1 575 aa7.81□□□□□ -1.16
TPM1-222ENST00000560131 LILRB3O75022 631 aa7.8□□□□□ -1.16
TPM1-222ENST00000560131 PDE4CQ08493 712 aa7.8□□□□□ -1.16
TPM1-222ENST00000560131 NFX1Q12986 1120 aaKnown RBP7.8□□□□□ -1.16
TPM1-222ENST00000560131 MOXD2PA6NHM9 499 aa7.79□□□□□ -1.16
TPM1-222ENST00000560131 ABL2P42684 1182 aa7.79□□□□□ -1.16
TPM1-222ENST00000560131 LIAT1Q6ZQX7 453 aa7.79□□□□□ -1.16
TPM1-222ENST00000560131 ANKLE1Q8NAG6 615 aa7.79□□□□□ -1.16
TPM1-222ENST00000560131 CLSPNQ9HAW4 1339 aa7.78□□□□□ -1.16
TPM1-222ENST00000560131 C11orf95C9JLR9 678 aaPredicted RBP7.78□□□□□ -1.16
TPM1-222ENST00000560131 C3orf80F5H4A9 247 aa7.78□□□□□ -1.16
TPM1-222ENST00000560131 AP1G2O75843 785 aa7.78□□□□□ -1.16
TPM1-222ENST00000560131 CSPP1Q1MSJ5 1256 aa7.78□□□□□ -1.16
TPM1-222ENST00000560131 DDX11L8A8MPP1 907 aa7.77□□□□□ -1.17
TPM1-222ENST00000560131 DNAJB2P25686 324 aa7.77□□□□□ -1.17
TPM1-222ENST00000560131 QPCTQ16769 361 aa7.77□□□□□ -1.17
TPM1-222ENST00000560131 TBC1D2BQ9UPU7 963 aa7.77□□□□□ -1.17
TPM1-222ENST00000560131 NUTM2BA6NNL0 878 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms