RNA–Protein interactions for RNA: ENST00000560107.6

LRRC49-221, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 2,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-221ENST00000560107 KDM5AP29375 1690 aaKnown RBP6.57□□□□□ -1.36
LRRC49-221ENST00000560107 RSPH6AQ9H0K4 717 aa6.56□□□□□ -1.36
LRRC49-221ENST00000560107 RRAGDQ9NQL2 400 aaPredicted RBP6.56□□□□□ -1.36
LRRC49-221ENST00000560107 RRP7AQ9Y3A4 280 aaKnown RBP6.56□□□□□ -1.36
LRRC49-221ENST00000560107 CEP152O94986 1710 aa6.56□□□□□ -1.36
LRRC49-221ENST00000560107 RLBP1P12271 317 aa6.56□□□□□ -1.36
LRRC49-221ENST00000560107 SPRYD3Q8NCJ5 442 aa6.56□□□□□ -1.36
LRRC49-221ENST00000560107 TBC1D2Q9BYX2 928 aa6.56□□□□□ -1.36
LRRC49-221ENST00000560107 NINLQ9Y2I6 1382 aa6.56□□□□□ -1.36
LRRC49-221ENST00000560107 RARSP54136 660 aaKnown RBP6.56□□□□□ -1.36
LRRC49-221ENST00000560107 TBC1D32Q96NH3 1257 aa6.56□□□□□ -1.36
LRRC49-221ENST00000560107 BCL2L13Q9BXK5 485 aa6.56□□□□□ -1.36
LRRC49-221ENST00000560107 PDZRN3Q9UPQ7 1066 aa6.56□□□□□ -1.36
LRRC49-221ENST00000560107 CLTCL1P53675 1640 aa6.55□□□□□ -1.36
LRRC49-221ENST00000560107 CFAP70Q5T0N1 1121 aa6.55□□□□□ -1.36
LRRC49-221ENST00000560107 NGEFQ8N5V2 710 aa6.55□□□□□ -1.36
LRRC49-221ENST00000560107 PMFBP1Q8TBY8 1022 aa6.55□□□□□ -1.36
LRRC49-221ENST00000560107 ZMYND15Q9H091 742 aa6.55□□□□□ -1.36
LRRC49-221ENST00000560107 UPF2Q9HAU5 1272 aaKnown RBP6.55□□□□□ -1.36
LRRC49-221ENST00000560107 TRPM2O94759 1503 aa6.55□□□□□ -1.36
LRRC49-221ENST00000560107 ERVK-7P63135 1459 aa6.55□□□□□ -1.36
LRRC49-221ENST00000560107 CDK11BP21127 795 aaKnown RBP6.55□□□□□ -1.36
LRRC49-221ENST00000560107 TNNT2P45379 298 aaPredicted RBP6.55□□□□□ -1.36
LRRC49-221ENST00000560107 L1TD1Q5T7N2 865 aaKnown RBP6.54□□□□□ -1.36
LRRC49-221ENST00000560107 TRAPPC8Q9Y2L5 1435 aa6.54□□□□□ -1.36
LRRC49-221ENST00000560107 POLR3AO14802 1390 aaPredicted RBP6.54□□□□□ -1.36
LRRC49-221ENST00000560107 TCP11L2Q8N4U5 519 aa6.54□□□□□ -1.36
LRRC49-221ENST00000560107 STAC3Q96MF2 364 aa6.54□□□□□ -1.36
LRRC49-221ENST00000560107 GZF1Q9H116 711 aaPredicted RBP6.54□□□□□ -1.36
LRRC49-221ENST00000560107 XRCC6P12956 609 aaKnown RBP eCLIP6.53□□□□□ -1.36
LRRC49-221ENST00000560107 PTPRTO14522 1441 aa6.53□□□□□ -1.36
LRRC49-221ENST00000560107 ADGRF5Q8IZF2 1346 aa6.53□□□□□ -1.36
LRRC49-221ENST00000560107 SHPRHQ149N8 1683 aa6.53□□□□□ -1.36
LRRC49-221ENST00000560107 EFCAB2Q5VUJ9 269 aa6.53□□□□□ -1.36
LRRC49-221ENST00000560107 RUNDC1Q96C34 613 aa6.53□□□□□ -1.36
LRRC49-221ENST00000560107 MCM4P33991 863 aa6.52□□□□□ -1.37
LRRC49-221ENST00000560107 TMEM132AQ24JP5 1023 aa6.52□□□□□ -1.37
LRRC49-221ENST00000560107 MORC1Q86VD1 984 aa6.52□□□□□ -1.37
LRRC49-221ENST00000560107 AFAP1Q8N556 730 aa6.52□□□□□ -1.37
LRRC49-221ENST00000560107 RWDD1Q9H446 243 aaPredicted RBP6.52□□□□□ -1.37
LRRC49-221ENST00000560107 KIAA1210Q9ULL0 1709 aa6.52□□□□□ -1.37
LRRC49-221ENST00000560107 PLCH2O75038 1416 aa6.52□□□□□ -1.37
LRRC49-221ENST00000560107 GOLGA6L3A6NEY3 463 aa6.52□□□□□ -1.37
LRRC49-221ENST00000560107 PANK2Q9BZ23 570 aa6.52□□□□□ -1.37
LRRC49-221ENST00000560107 ABCA6Q8N139 1617 aa6.52□□□□□ -1.37
LRRC49-221ENST00000560107 SPAG9O60271 1321 aaKnown RBP6.51□□□□□ -1.37
LRRC49-221ENST00000560107 ABCC1P33527 1531 aa6.51□□□□□ -1.37
LRRC49-221ENST00000560107 UGGT1Q9NYU2 1555 aa6.51□□□□□ -1.37
LRRC49-221ENST00000560107 NSD3Q9BZ95 1437 aa6.51□□□□□ -1.37
LRRC49-221ENST00000560107 FSD2A1L4K1 749 aa6.51□□□□□ -1.37
LRRC49-221ENST00000560107 MFAP1P55081 439 aaKnown RBP6.51□□□□□ -1.37
LRRC49-221ENST00000560107 WDR63Q8IWG1 891 aa6.51□□□□□ -1.37
LRRC49-221ENST00000560107 C22orf23Q9BZE7 217 aa6.51□□□□□ -1.37
LRRC49-221ENST00000560107 SLC12A5Q9H2X9 1139 aa6.51□□□□□ -1.37
LRRC49-221ENST00000560107 ZMYM3Q14202 1370 aa6.51□□□□□ -1.37
LRRC49-221ENST00000560107 IQSEC2Q5JU85 1478 aa6.51□□□□□ -1.37
LRRC49-221ENST00000560107 MAP3K4Q9Y6R4 1608 aa6.51□□□□□ -1.37
LRRC49-221ENST00000560107 NAP1L5Q96NT1 182 aaPredicted RBP6.5□□□□□ -1.37
LRRC49-221ENST00000560107 TET3O43151 1660 aa6.5□□□□□ -1.37
LRRC49-221ENST00000560107 TRAK2O60296 914 aa6.5□□□□□ -1.37
LRRC49-221ENST00000560107 MTHFSP49914 203 aa6.5□□□□□ -1.37
LRRC49-221ENST00000560107 MVPQ14764 893 aaKnown RBP6.5□□□□□ -1.37
LRRC49-221ENST00000560107 CHMP5Q9NZZ3 219 aa6.5□□□□□ -1.37
LRRC49-221ENST00000560107 SHROOM2Q13796 1616 aa6.5□□□□□ -1.37
LRRC49-221ENST00000560107 RTEL1-TNFRSF6BF6WH68 1400 aa6.5□□□□□ -1.37
LRRC49-221ENST00000560107 ERCC6L2Q5T890 1561 aa6.5□□□□□ -1.37
LRRC49-221ENST00000560107 GLIPR1L2Q4G1C9 344 aa6.49□□□□□ -1.37
LRRC49-221ENST00000560107 DEPDC5O75140 1603 aa6.49□□□□□ -1.37
LRRC49-221ENST00000560107 ZKSCAN2Q63HK3 967 aa6.49□□□□□ -1.37
LRRC49-221ENST00000560107 FTSJ3Q8IY81 847 aaKnown RBP6.49□□□□□ -1.37
LRRC49-221ENST00000560107 ZFYVE16Q7Z3T8 1539 aa6.49□□□□□ -1.37
LRRC49-221ENST00000560107 KIF3BO15066 747 aa6.48□□□□□ -1.37
LRRC49-221ENST00000560107 CCDC27Q2M243 656 aa6.48□□□□□ -1.37
LRRC49-221ENST00000560107 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.48□□□□□ -1.37
LRRC49-221ENST00000560107 DZIP1LQ8IYY4 767 aaKnown RBP6.48□□□□□ -1.37
LRRC49-221ENST00000560107 TSR2Q969E8 191 aaKnown RBP6.48□□□□□ -1.37
LRRC49-221ENST00000560107 MYH16Q9H6N6 1097 aa6.48□□□□□ -1.37
LRRC49-221ENST00000560107 TRAK1Q9UPV9 953 aa6.48□□□□□ -1.37
LRRC49-221ENST00000560107 MYOM2P54296 1465 aa6.48□□□□□ -1.37
LRRC49-221ENST00000560107 KANK1Q14678 1352 aa6.48□□□□□ -1.37
LRRC49-221ENST00000560107 MYO3AQ8NEV4 1616 aa6.48□□□□□ -1.37
LRRC49-221ENST00000560107 U2AF1L5P0DN76 240 aaPredicted RBP6.48□□□□□ -1.37
LRRC49-221ENST00000560107 CLCN1P35523 988 aa6.48□□□□□ -1.37
LRRC49-221ENST00000560107 U2AF1Q01081 240 aaKnown RBP eCLIP6.48□□□□□ -1.37
LRRC49-221ENST00000560107 PNNQ9H307 717 aaKnown RBP6.48□□□□□ -1.37
LRRC49-221ENST00000560107 ZNF518AQ6AHZ1 1483 aa6.48□□□□□ -1.37
LRRC49-221ENST00000560107 CHD1O14646 1710 aa6.47□□□□□ -1.37
LRRC49-221ENST00000560107 KIF1BO60333 1816 aa6.47□□□□□ -1.37
LRRC49-221ENST00000560107 ZCCHC11Q5TAX3 1644 aaKnown RBP6.47□□□□□ -1.37
LRRC49-221ENST00000560107 EXOSC9Q06265 439 aaKnown RBP6.47□□□□□ -1.37
LRRC49-221ENST00000560107 CFAP53Q96M91 514 aa6.47□□□□□ -1.37
LRRC49-221ENST00000560107 ZNF692Q9BU19 519 aaPredicted RBP6.47□□□□□ -1.37
LRRC49-221ENST00000560107 SMC4Q9NTJ3 1288 aa6.47□□□□□ -1.37
LRRC49-221ENST00000560107 IFT172Q9UG01 1749 aa6.47□□□□□ -1.37
LRRC49-221ENST00000560107 SBNO2Q9Y2G9 1366 aa6.47□□□□□ -1.37
LRRC49-221ENST00000560107 MROH2AA6NES4 1674 aa6.47□□□□□ -1.37
LRRC49-221ENST00000560107 CHGAP10645 457 aaKnown RBP6.47□□□□□ -1.37
LRRC49-221ENST00000560107 TRIM27P14373 513 aa6.47□□□□□ -1.37
LRRC49-221ENST00000560107 HSP90B1P14625 803 aaKnown RBP6.47□□□□□ -1.37
LRRC49-221ENST00000560107 MRE11P49959 708 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms