RNA–Protein interactions for RNA: ENST00000559827.1

LINS1-206, Transcript of lines homolog 1, humanhuman

TSL 4

Gene LINS1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-206ENST00000559827 TOM1O60784 492 aa28.03■■■□□ 2.08
LINS1-206ENST00000559827 WAPLQ7Z5K2 1190 aa28.03■■■□□ 2.08
LINS1-206ENST00000559827 C14orf37Q86TY3 774 aa28.03■■■□□ 2.08
LINS1-206ENST00000559827 UBAP1LF5GYI3 381 aa28.02■■■□□ 2.08
LINS1-206ENST00000559827 PRAM1Q96QH2 718 aa28.02■■■□□ 2.08
LINS1-206ENST00000559827 CADPS2Q86UW7 1296 aa27.99■■■□□ 2.07
LINS1-206ENST00000559827 MST1RQ04912 1400 aa27.97■■■□□ 2.07
LINS1-206ENST00000559827 FMN2Q9NZ56 1722 aa27.97■■■□□ 2.07
LINS1-206ENST00000559827 ATF3P18847 181 aa27.96■■■□□ 2.07
LINS1-206ENST00000559827 POGKQ9P215 609 aa27.96■■■□□ 2.07
LINS1-206ENST00000559827 QRICH2Q9H0J4 1663 aa27.96■■■□□ 2.07
LINS1-206ENST00000559827 EIF3AQ14152 1382 aaKnown RBP27.94■■■□□ 2.06
LINS1-206ENST00000559827 CARD11Q9BXL7 1154 aa27.93■■■□□ 2.06
LINS1-206ENST00000559827 ROBO1Q9Y6N7 1651 aa27.92■■■□□ 2.06
LINS1-206ENST00000559827 SLAIN2Q9P270 581 aa27.91■■■□□ 2.06
LINS1-206ENST00000559827 CENPJQ9HC77 1338 aaPredicted RBP27.91■■■□□ 2.06
LINS1-206ENST00000559827 SAFB2Q14151 953 aaKnown RBP eCLIP27.9■■■□□ 2.06
LINS1-206ENST00000559827 SCAF1Q9H7N4 1312 aaKnown RBP27.89■■■□□ 2.05
LINS1-206ENST00000559827 C1orf167Q5SNV9 1468 aa27.89■■■□□ 2.05
LINS1-206ENST00000559827 SBNO2Q9Y2G9 1366 aa27.86■■■□□ 2.05
LINS1-206ENST00000559827 PIP4K2BP78356 416 aa27.85■■■□□ 2.05
LINS1-206ENST00000559827 MINK1Q8N4C8 1332 aaPredicted RBP27.85■■■□□ 2.05
LINS1-206ENST00000559827 USP32Q8NFA0 1604 aa27.85■■■□□ 2.05
LINS1-206ENST00000559827 TULP4Q9NRJ4 1543 aa27.84■■■□□ 2.05
LINS1-206ENST00000559827 ANKARQ7Z5J8 1434 aa27.84■■■□□ 2.05
LINS1-206ENST00000559827 HIRIP3Q9BW71 556 aaPredicted RBP27.81■■■□□ 2.04
LINS1-206ENST00000559827 NHSL1Q5SYE7 1610 aa27.81■■■□□ 2.04
LINS1-206ENST00000559827 AHDC1Q5TGY3 1603 aaPredicted RBP27.81■■■□□ 2.04
LINS1-206ENST00000559827 WASLO00401 505 aaPredicted RBP27.8■■■□□ 2.04
LINS1-206ENST00000559827 USP47Q96K76 1375 aa27.8■■■□□ 2.04
LINS1-206ENST00000559827 RGPD8O14715 1765 aaPredicted RBP27.79■■■□□ 2.04
LINS1-206ENST00000559827 BRINP3Q76B58 766 aa27.79■■■□□ 2.04
LINS1-206ENST00000559827 KIF1AQ12756 1690 aa27.78■■■□□ 2.04
LINS1-206ENST00000559827 ATP7BP35670 1465 aa27.77■■■□□ 2.04
LINS1-206ENST00000559827 ITSN1Q15811 1721 aa27.77■■■□□ 2.04
LINS1-206ENST00000559827 TOPAZ1Q8N9V7 1692 aa27.77■■■□□ 2.04
LINS1-206ENST00000559827 PHLPP1O60346 1717 aa27.73■■■□□ 2.03
LINS1-206ENST00000559827 PRR36Q9H6K5 1346 aa27.72■■■□□ 2.03
LINS1-206ENST00000559827 COL16A1Q07092 1604 aaPredicted RBP27.72■■■□□ 2.03
LINS1-206ENST00000559827 ORAI2Q96SN7 254 aa27.71■■■□□ 2.03
LINS1-206ENST00000559827 CDK19Q9BWU1 502 aa27.71■■■□□ 2.03
LINS1-206ENST00000559827 ST20-MTHFSA0A0A6YYL1 179 aa27.7■■■□□ 2.02
LINS1-206ENST00000559827 NUTM2FA1L443 756 aa27.7■■■□□ 2.02
LINS1-206ENST00000559827 TESK2Q96S53 571 aa27.7■■■□□ 2.02
LINS1-206ENST00000559827 EVC2Q86UK5 1308 aa27.69■■■□□ 2.02
LINS1-206ENST00000559827 DISP3Q9P2K9 1392 aa27.69■■■□□ 2.02
LINS1-206ENST00000559827 HSPA1LP34931 641 aa27.68■■■□□ 2.02
LINS1-206ENST00000559827 ESCO1Q5FWF5 840 aa27.68■■■□□ 2.02
LINS1-206ENST00000559827 SLC24A1O60721 1099 aa27.66■■■□□ 2.02
LINS1-206ENST00000559827 NUDT16Q96DE0 195 aaKnown RBP27.65■■■□□ 2.02
LINS1-206ENST00000559827 SRPK2P78362 688 aaKnown RBP27.63■■■□□ 2.01
LINS1-206ENST00000559827 PHF8Q9UPP1 1060 aa27.63■■■□□ 2.01
LINS1-206ENST00000559827 PXDNQ92626 1479 aa27.63■■■□□ 2.01
LINS1-206ENST00000559827 NPHP3Q7Z494 1330 aa27.62■■■□□ 2.01
LINS1-206ENST00000559827 EIF4G2P78344 907 aaKnown RBP eCLIP27.61■■■□□ 2.01
LINS1-206ENST00000559827 CABP2Q9NPB3 220 aa27.61■■■□□ 2.01
LINS1-206ENST00000559827 CCDC61Q9Y6R9 512 aa27.61■■■□□ 2.01
LINS1-206ENST00000559827 ATAD2Q6PL18 1390 aa27.6■■■□□ 2.01
LINS1-206ENST00000559827 PUS7Q96PZ0 661 aaKnown RBP27.6■■■□□ 2.01
LINS1-206ENST00000559827 SOS2Q07890 1332 aaPredicted RBP27.6■■■□□ 2.01
LINS1-206ENST00000559827 POLR3AO14802 1390 aaPredicted RBP27.58■■■□□ 2.01
LINS1-206ENST00000559827 PPIP5K1Q6PFW1 1433 aa27.58■■■□□ 2
LINS1-206ENST00000559827 SHPRHQ149N8 1683 aa27.57■■■□□ 2
LINS1-206ENST00000559827 DDX17Q92841 729 aaKnown RBP27.57■■■□□ 2
LINS1-206ENST00000559827 PLEKHG3A1L390 1219 aa27.56■■■□□ 2
LINS1-206ENST00000559827 FOXO3O43524 673 aa27.56■■■□□ 2
LINS1-206ENST00000559827 HSPA5P11021 654 aaKnown RBP27.56■■■□□ 2
LINS1-206ENST00000559827 TRPM3Q9HCF6 1732 aaPredicted RBP27.55■■■□□ 2
LINS1-206ENST00000559827 PMFBP1Q8TBY8 1022 aa27.54■■■□□ 2
LINS1-206ENST00000559827 TMF1P82094 1093 aa27.53■■■□□ 2
LINS1-206ENST00000559827 JCADQ9P266 1359 aa27.51■■□□□ 1.99
LINS1-206ENST00000559827 AKAP12Q02952 1782 aa27.51■■□□□ 1.99
LINS1-206ENST00000559827 LRRC59Q96AG4 307 aaKnown RBP27.5■■□□□ 1.99
LINS1-206ENST00000559827 SBNO1A3KN83 1393 aa27.49■■□□□ 1.99
LINS1-206ENST00000559827 COL22A1Q8NFW1 1626 aaPredicted RBP27.49■■□□□ 1.99
LINS1-206ENST00000559827 NINLQ9Y2I6 1382 aa27.48■■□□□ 1.99
LINS1-206ENST00000559827 ACEP12821 1306 aa27.48■■□□□ 1.99
LINS1-206ENST00000559827 ZEB1P37275 1124 aaPredicted RBP27.48■■□□□ 1.99
LINS1-206ENST00000559827 NGDNQ8NEJ9 315 aaKnown RBP27.48■■□□□ 1.99
LINS1-206ENST00000559827 ALS2Q96Q42 1657 aa27.48■■□□□ 1.99
LINS1-206ENST00000559827 CDCA8Q53HL2 280 aa27.47■■□□□ 1.99
LINS1-206ENST00000559827 KRT28Q7Z3Y7 464 aa27.47■■□□□ 1.99
LINS1-206ENST00000559827 CABP1Q9NZU7 370 aa27.47■■□□□ 1.99
LINS1-206ENST00000559827 TNS3Q68CZ2 1445 aa27.47■■□□□ 1.99
LINS1-206ENST00000559827 MYOM1P52179 1685 aa27.46■■□□□ 1.99
LINS1-206ENST00000559827 CPSF1Q10570 1443 aaKnown RBP27.46■■□□□ 1.99
LINS1-206ENST00000559827 MON2Q7Z3U7 1717 aa27.46■■□□□ 1.99
LINS1-206ENST00000559827 PNPLA6Q8IY17 1366 aa27.46■■□□□ 1.99
LINS1-206ENST00000559827 CD163L1Q9NR16 1453 aa27.45■■□□□ 1.99
LINS1-206ENST00000559827 XPCQ01831 940 aaPredicted RBP27.45■■□□□ 1.98
LINS1-206ENST00000559827 PSME1Q06323 249 aa27.45■■□□□ 1.98
LINS1-206ENST00000559827 ILDR2Q71H61 639 aa27.45■■□□□ 1.98
LINS1-206ENST00000559827 SPATA31A3Q5VYP0 1347 aa27.44■■□□□ 1.98
LINS1-206ENST00000559827 MED1Q15648 1581 aaPredicted RBP27.44■■□□□ 1.98
LINS1-206ENST00000559827 NRKQ7Z2Y5 1582 aa27.44■■□□□ 1.98
LINS1-206ENST00000559827 BRD4O60885 1362 aaPredicted RBP27.44■■□□□ 1.98
LINS1-206ENST00000559827 USP6P35125 1406 aa27.43■■□□□ 1.98
LINS1-206ENST00000559827 SSH2Q76I76 1423 aa27.41■■□□□ 1.98
LINS1-206ENST00000559827 SPATA31A6Q5VVP1 1343 aa27.4■■□□□ 1.98
LINS1-206ENST00000559827 ARHGEF10O15013 1369 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms