RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 AK7Q96M32 723 aa10.88□□□□□ -0.67
CRNDE-207ENST00000559598 RNF40O75150 1001 aa10.87□□□□□ -0.67
CRNDE-207ENST00000559598 SLC4A3P48751 1232 aa10.86□□□□□ -0.67
CRNDE-207ENST00000559598 DAXXQ9UER7 740 aaPredicted RBP10.86□□□□□ -0.67
CRNDE-207ENST00000559598 IRX2Q9BZI1 471 aaPredicted RBP10.85□□□□□ -0.67
CRNDE-207ENST00000559598 TRIM66O15016 1216 aa10.84□□□□□ -0.67
CRNDE-207ENST00000559598 MAPKBP1O60336 1514 aa10.84□□□□□ -0.67
CRNDE-207ENST00000559598 MDM2Q00987 491 aaPredicted RBP10.83□□□□□ -0.68
CRNDE-207ENST00000559598 AMHR2Q16671 573 aa10.83□□□□□ -0.68
CRNDE-207ENST00000559598 FHAD1B1AJZ9 1412 aa10.83□□□□□ -0.68
CRNDE-207ENST00000559598 ABCC10Q5T3U5 1492 aa10.82□□□□□ -0.68
CRNDE-207ENST00000559598 CLCN1P35523 988 aa10.82□□□□□ -0.68
CRNDE-207ENST00000559598 GPCPD1Q9NPB8 672 aa10.82□□□□□ -0.68
CRNDE-207ENST00000559598 DIP2BQ9P265 1576 aa10.82□□□□□ -0.68
CRNDE-207ENST00000559598 ERICH3Q5RHP9 1530 aa10.81□□□□□ -0.68
CRNDE-207ENST00000559598 KDM6BO15054 1643 aa10.8□□□□□ -0.68
CRNDE-207ENST00000559598 TMUB1Q9BVT8 246 aa10.8□□□□□ -0.68
CRNDE-207ENST00000559598 WRNQ14191 1432 aaPredicted RBP eCLIP10.8□□□□□ -0.68
CRNDE-207ENST00000559598 DDX11L8A8MPP1 907 aa10.79□□□□□ -0.68
CRNDE-207ENST00000559598 SULF1Q8IWU6 871 aa10.79□□□□□ -0.68
CRNDE-207ENST00000559598 IL21Q9HBE4 155 aa10.79□□□□□ -0.68
CRNDE-207ENST00000559598 BIVM-ERCC5R4GMW8 1640 aa10.78□□□□□ -0.68
CRNDE-207ENST00000559598 SLC10A3P09131 477 aa10.78□□□□□ -0.68
CRNDE-207ENST00000559598 TTLL12Q14166 644 aaPredicted RBP10.78□□□□□ -0.68
CRNDE-207ENST00000559598 TJAP1Q5JTD0 557 aa10.78□□□□□ -0.68
CRNDE-207ENST00000559598 RSPH4AQ5TD94 716 aa10.78□□□□□ -0.68
CRNDE-207ENST00000559598 PRG4Q92954 1404 aaPredicted RBP10.77□□□□□ -0.68
CRNDE-207ENST00000559598 MTRQ99707 1265 aa10.77□□□□□ -0.69
CRNDE-207ENST00000559598 REPIN1Q9BWE0 567 aaKnown RBP10.77□□□□□ -0.69
CRNDE-207ENST00000559598 PDE4DQ08499 809 aa10.76□□□□□ -0.69
CRNDE-207ENST00000559598 RDH13Q8NBN7 331 aa10.76□□□□□ -0.69
CRNDE-207ENST00000559598 TOP2BQ02880 1626 aa10.76□□□□□ -0.69
CRNDE-207ENST00000559598 RUSC2Q8N2Y8 1516 aa10.75□□□□□ -0.69
CRNDE-207ENST00000559598 PRKCSHP14314 528 aaPredicted RBP10.75□□□□□ -0.69
CRNDE-207ENST00000559598 FAM69CQ0P6D2 419 aa10.75□□□□□ -0.69
CRNDE-207ENST00000559598 PARP9Q8IXQ6 854 aa10.75□□□□□ -0.69
CRNDE-207ENST00000559598 ADCY10Q96PN6 1610 aa10.74□□□□□ -0.69
CRNDE-207ENST00000559598 CFHP08603 1231 aa10.74□□□□□ -0.69
CRNDE-207ENST00000559598 APLP1P51693 650 aa10.74□□□□□ -0.69
CRNDE-207ENST00000559598 PRR14Q9BWN1 585 aa10.74□□□□□ -0.69
CRNDE-207ENST00000559598 FAM217BQ9NTX9 383 aaPredicted RBP10.74□□□□□ -0.69
CRNDE-207ENST00000559598 TSPOAP1O95153 1857 aa10.74□□□□□ -0.69
CRNDE-207ENST00000559598 GIGYF2Q6Y7W6 1299 aaKnown RBP10.73□□□□□ -0.69
CRNDE-207ENST00000559598 CD46P15529 392 aa10.72□□□□□ -0.69
CRNDE-207ENST00000559598 KMT5BQ4FZB7 885 aa10.72□□□□□ -0.69
CRNDE-207ENST00000559598 ACTN4O43707 911 aaKnown RBP10.7□□□□□ -0.7
CRNDE-207ENST00000559598 SSTR3P32745 418 aaPredicted RBP10.7□□□□□ -0.7
CRNDE-207ENST00000559598 GCGRP47871 477 aa10.7□□□□□ -0.7
CRNDE-207ENST00000559598 MS4A1P11836 297 aa10.67□□□□□ -0.7
CRNDE-207ENST00000559598 GGCXP38435 758 aa10.67□□□□□ -0.7
CRNDE-207ENST00000559598 LAPTM4AQ15012 233 aa10.67□□□□□ -0.7
CRNDE-207ENST00000559598 PPP1R18Q6NYC8 613 aa10.66□□□□□ -0.7
CRNDE-207ENST00000559598 ZNF516Q92618 1163 aa10.66□□□□□ -0.7
CRNDE-207ENST00000559598 PCDHB3Q9Y5E6 796 aa10.66□□□□□ -0.7
CRNDE-207ENST00000559598 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.65□□□□□ -0.7
CRNDE-207ENST00000559598 ADGRL1O94910 1474 aa10.64□□□□□ -0.71
CRNDE-207ENST00000559598 COPS2P61201 443 aa10.64□□□□□ -0.71
CRNDE-207ENST00000559598 FUT2Q10981 343 aa10.64□□□□□ -0.71
CRNDE-207ENST00000559598 GPBP1L1Q9HC44 474 aaPredicted RBP10.64□□□□□ -0.71
CRNDE-207ENST00000559598 GLI2P10070 1586 aa10.64□□□□□ -0.71
CRNDE-207ENST00000559598 KIAA0586Q9BVV6 1533 aa10.63□□□□□ -0.71
CRNDE-207ENST00000559598 KDM4AO75164 1064 aa10.63□□□□□ -0.71
CRNDE-207ENST00000559598 BEGAINQ9BUH8 593 aa10.63□□□□□ -0.71
CRNDE-207ENST00000559598 PRKD2Q9BZL6 878 aa10.63□□□□□ -0.71
CRNDE-207ENST00000559598 KDM4CQ9H3R0 1056 aa10.63□□□□□ -0.71
CRNDE-207ENST00000559598 V9GY48 417 aaPredicted RBP10.63□□□□□ -0.71
CRNDE-207ENST00000559598 CUL7Q14999 1698 aa10.63□□□□□ -0.71
CRNDE-207ENST00000559598 PPRC1Q5VV67 1664 aaKnown RBP10.63□□□□□ -0.71
CRNDE-207ENST00000559598 ZPR1O75312 459 aa10.62□□□□□ -0.71
CRNDE-207ENST00000559598 HECW2Q9P2P5 1572 aa10.61□□□□□ -0.71
CRNDE-207ENST00000559598 ATP6V1AP38606 617 aa10.61□□□□□ -0.71
CRNDE-207ENST00000559598 BLOC1S3Q6QNY0 202 aa10.61□□□□□ -0.71
CRNDE-207ENST00000559598 Q6ZNB5 142 aa10.61□□□□□ -0.71
CRNDE-207ENST00000559598 ABCC2Q92887 1545 aa10.6□□□□□ -0.71
CRNDE-207ENST00000559598 NEUROD2Q15784 382 aa10.6□□□□□ -0.71
CRNDE-207ENST00000559598 PUS10Q3MIT2 529 aaKnown RBP10.6□□□□□ -0.71
CRNDE-207ENST00000559598 NUTM1Q86Y26 1132 aa10.6□□□□□ -0.71
CRNDE-207ENST00000559598 PLB1Q6P1J6 1458 aa10.6□□□□□ -0.71
CRNDE-207ENST00000559598 USP46P62068 366 aa10.59□□□□□ -0.71
CRNDE-207ENST00000559598 GRIPAP1Q4V328 841 aa10.59□□□□□ -0.71
CRNDE-207ENST00000559598 NKX2-3Q8TAU0 364 aa10.59□□□□□ -0.71
CRNDE-207ENST00000559598 BRPF1P55201 1214 aaPredicted RBP10.58□□□□□ -0.72
CRNDE-207ENST00000559598 MORN1Q5T089 497 aa10.58□□□□□ -0.72
CRNDE-207ENST00000559598 SPIRE2Q8WWL2 714 aa10.58□□□□□ -0.72
CRNDE-207ENST00000559598 TEX14Q8IWB6 1497 aa10.57□□□□□ -0.72
CRNDE-207ENST00000559598 HOXA2O43364 376 aa10.57□□□□□ -0.72
CRNDE-207ENST00000559598 NR1I2O75469 434 aa10.57□□□□□ -0.72
CRNDE-207ENST00000559598 MAP3K4Q9Y6R4 1608 aa10.57□□□□□ -0.72
CRNDE-207ENST00000559598 GFRA3O60609 400 aa10.56□□□□□ -0.72
CRNDE-207ENST00000559598 SCUBE3Q8IX30 993 aa10.56□□□□□ -0.72
CRNDE-207ENST00000559598 PTPRGP23470 1445 aa10.56□□□□□ -0.72
CRNDE-207ENST00000559598 CARMIL2Q6F5E8 1435 aa10.56□□□□□ -0.72
CRNDE-207ENST00000559598 ASXL2Q76L83 1435 aa10.56□□□□□ -0.72
CRNDE-207ENST00000559598 UHRF1BP1LA0JNW5 1464 aa10.55□□□□□ -0.72
CRNDE-207ENST00000559598 DIXDC1Q155Q3 683 aa10.55□□□□□ -0.72
CRNDE-207ENST00000559598 TBC1D2Q9BYX2 928 aa10.55□□□□□ -0.72
CRNDE-207ENST00000559598 FAM117AQ9C073 453 aa10.54□□□□□ -0.72
CRNDE-207ENST00000559598 SLC27A5Q9Y2P5 690 aa10.54□□□□□ -0.72
CRNDE-207ENST00000559598 TNIKQ9UKE5 1360 aa10.53□□□□□ -0.72
CRNDE-207ENST00000559598 HLA-CQ95604 372 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms