RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 STK26Q9P289 416 aa21.02■□□□□ 0.96
SNRPA1-207ENST00000559309 EIF3AQ14152 1382 aaKnown RBP21■□□□□ 0.95
SNRPA1-207ENST00000559309 ADGRL3Q9HAR2 1447 aa21■□□□□ 0.95
SNRPA1-207ENST00000559309 TMEM94Q12767 1356 aa20.99■□□□□ 0.95
SNRPA1-207ENST00000559309 WAPLQ7Z5K2 1190 aa20.99■□□□□ 0.95
SNRPA1-207ENST00000559309 PRAM1Q96QH2 718 aa20.99■□□□□ 0.95
SNRPA1-207ENST00000559309 CDC42BPGQ6DT37 1551 aa20.98■□□□□ 0.95
SNRPA1-207ENST00000559309 TESK2Q96S53 571 aa20.98■□□□□ 0.95
SNRPA1-207ENST00000559309 CENPJQ9HC77 1338 aaPredicted RBP20.98■□□□□ 0.95
SNRPA1-207ENST00000559309 TOM1O60784 492 aa20.97■□□□□ 0.95
SNRPA1-207ENST00000559309 DCCP43146 1447 aa20.96■□□□□ 0.95
SNRPA1-207ENST00000559309 TULP4Q9NRJ4 1543 aa20.95■□□□□ 0.94
SNRPA1-207ENST00000559309 PROSER2Q86WR7 435 aaPredicted RBP20.95■□□□□ 0.94
SNRPA1-207ENST00000559309 ST20-MTHFSA0A0A6YYL1 179 aa20.94■□□□□ 0.94
SNRPA1-207ENST00000559309 HSPA1LP34931 641 aa20.94■□□□□ 0.94
SNRPA1-207ENST00000559309 EIF4G2P78344 907 aaKnown RBP eCLIP20.94■□□□□ 0.94
SNRPA1-207ENST00000559309 FMN2Q9NZ56 1722 aa20.92■□□□□ 0.94
SNRPA1-207ENST00000559309 HSPA5P11021 654 aaKnown RBP20.92■□□□□ 0.94
SNRPA1-207ENST00000559309 PIP4K2BP78356 416 aa20.9■□□□□ 0.94
SNRPA1-207ENST00000559309 POGKQ9P215 609 aa20.9■□□□□ 0.94
SNRPA1-207ENST00000559309 USP32Q8NFA0 1604 aa20.89■□□□□ 0.94
SNRPA1-207ENST00000559309 C19orf44Q9H6X5 657 aa20.89■□□□□ 0.93
SNRPA1-207ENST00000559309 RBM33Q96EV2 1170 aaKnown RBP20.88■□□□□ 0.93
SNRPA1-207ENST00000559309 SCAF1Q9H7N4 1312 aaKnown RBP20.87■□□□□ 0.93
SNRPA1-207ENST00000559309 SLC24A1O60721 1099 aa20.87■□□□□ 0.93
SNRPA1-207ENST00000559309 PUS7Q96PZ0 661 aaKnown RBP20.86■□□□□ 0.93
SNRPA1-207ENST00000559309 TOPAZ1Q8N9V7 1692 aa20.86■□□□□ 0.93
SNRPA1-207ENST00000559309 WASLO00401 505 aaPredicted RBP20.85■□□□□ 0.93
SNRPA1-207ENST00000559309 SAFB2Q14151 953 aaKnown RBP eCLIP20.85■□□□□ 0.93
SNRPA1-207ENST00000559309 MST1RQ04912 1400 aa20.85■□□□□ 0.93
SNRPA1-207ENST00000559309 MSH6P52701 1360 aa20.85■□□□□ 0.93
SNRPA1-207ENST00000559309 MINK1Q8N4C8 1332 aaPredicted RBP20.84■□□□□ 0.93
SNRPA1-207ENST00000559309 ATP7BP35670 1465 aa20.84■□□□□ 0.93
SNRPA1-207ENST00000559309 ANKARQ7Z5J8 1434 aa20.84■□□□□ 0.93
SNRPA1-207ENST00000559309 MED1Q15648 1581 aaPredicted RBP20.82■□□□□ 0.92
SNRPA1-207ENST00000559309 HIRIP3Q9BW71 556 aaPredicted RBP20.81■□□□□ 0.92
SNRPA1-207ENST00000559309 EVC2Q86UK5 1308 aa20.8■□□□□ 0.92
SNRPA1-207ENST00000559309 PRR36Q9H6K5 1346 aa20.8■□□□□ 0.92
SNRPA1-207ENST00000559309 C1orf167Q5SNV9 1468 aa20.8■□□□□ 0.92
SNRPA1-207ENST00000559309 RGPD8O14715 1765 aaPredicted RBP20.8■□□□□ 0.92
SNRPA1-207ENST00000559309 C11orf95C9JLR9 678 aaPredicted RBP20.79■□□□□ 0.92
SNRPA1-207ENST00000559309 CADPS2Q86UW7 1296 aa20.79■□□□□ 0.92
SNRPA1-207ENST00000559309 CDK19Q9BWU1 502 aa20.79■□□□□ 0.92
SNRPA1-207ENST00000559309 ITSN1Q15811 1721 aa20.78■□□□□ 0.92
SNRPA1-207ENST00000559309 MYOM1P52179 1685 aa20.78■□□□□ 0.92
SNRPA1-207ENST00000559309 TMF1P82094 1093 aa20.77■□□□□ 0.92
SNRPA1-207ENST00000559309 ATF3P18847 181 aa20.74■□□□□ 0.91
SNRPA1-207ENST00000559309 C14orf37Q86TY3 774 aa20.74■□□□□ 0.91
SNRPA1-207ENST00000559309 ATAD2Q6PL18 1390 aa20.73■□□□□ 0.91
SNRPA1-207ENST00000559309 NUDT16Q96DE0 195 aaKnown RBP20.73■□□□□ 0.91
SNRPA1-207ENST00000559309 CABP2Q9NPB3 220 aa20.73■□□□□ 0.91
SNRPA1-207ENST00000559309 KIF1AQ12756 1690 aa20.73■□□□□ 0.91
SNRPA1-207ENST00000559309 SLAIN2Q9P270 581 aa20.72■□□□□ 0.91
SNRPA1-207ENST00000559309 KIF7Q2M1P5 1343 aa20.72■□□□□ 0.91
SNRPA1-207ENST00000559309 WASHC2AQ641Q2 1341 aa20.72■□□□□ 0.91
SNRPA1-207ENST00000559309 CD163L1Q9NR16 1453 aa20.71■□□□□ 0.91
SNRPA1-207ENST00000559309 PLEKHG3A1L390 1219 aa20.71■□□□□ 0.91
SNRPA1-207ENST00000559309 CDCA8Q53HL2 280 aa20.71■□□□□ 0.91
SNRPA1-207ENST00000559309 CCDC61Q9Y6R9 512 aa20.71■□□□□ 0.91
SNRPA1-207ENST00000559309 CCDC7Q96M83 1385 aa20.71■□□□□ 0.91
SNRPA1-207ENST00000559309 NINLQ9Y2I6 1382 aa20.71■□□□□ 0.91
SNRPA1-207ENST00000559309 NHSL1Q5SYE7 1610 aa20.7■□□□□ 0.9
SNRPA1-207ENST00000559309 POLR3AO14802 1390 aaPredicted RBP20.7■□□□□ 0.9
SNRPA1-207ENST00000559309 SRPK2P78362 688 aaKnown RBP20.69■□□□□ 0.9
SNRPA1-207ENST00000559309 ROBO1Q9Y6N7 1651 aa20.69■□□□□ 0.9
SNRPA1-207ENST00000559309 AKAP12Q02952 1782 aa20.69■□□□□ 0.9
SNRPA1-207ENST00000559309 CPSF1Q10570 1443 aaKnown RBP20.69■□□□□ 0.9
SNRPA1-207ENST00000559309 PPIP5K1Q6PFW1 1433 aa20.68■□□□□ 0.9
SNRPA1-207ENST00000559309 BRINP3Q76B58 766 aa20.66■□□□□ 0.9
SNRPA1-207ENST00000559309 ORAI2Q96SN7 254 aa20.66■□□□□ 0.9
SNRPA1-207ENST00000559309 PHF23Q9BUL5 403 aaPredicted RBP20.66■□□□□ 0.9
SNRPA1-207ENST00000559309 AHDC1Q5TGY3 1603 aaPredicted RBP20.66■□□□□ 0.9
SNRPA1-207ENST00000559309 MON2Q7Z3U7 1717 aa20.66■□□□□ 0.9
SNRPA1-207ENST00000559309 NRKQ7Z2Y5 1582 aa20.64■□□□□ 0.9
SNRPA1-207ENST00000559309 SSH2Q76I76 1423 aa20.64■□□□□ 0.89
SNRPA1-207ENST00000559309 NUTM2FA1L443 756 aa20.63■□□□□ 0.89
SNRPA1-207ENST00000559309 TRPM3Q9HCF6 1732 aaPredicted RBP20.63■□□□□ 0.89
SNRPA1-207ENST00000559309 PXDNQ92626 1479 aa20.62■□□□□ 0.89
SNRPA1-207ENST00000559309 CABP1Q9NZU7 370 aa20.62■□□□□ 0.89
SNRPA1-207ENST00000559309 PHF8Q9UPP1 1060 aa20.62■□□□□ 0.89
SNRPA1-207ENST00000559309 SLC12A5Q9H2X9 1139 aa20.61■□□□□ 0.89
SNRPA1-207ENST00000559309 ANKRD36BQ8N2N9 1353 aa20.6■□□□□ 0.89
SNRPA1-207ENST00000559309 ZNF316A6NFI3 1004 aaPredicted RBP20.6■□□□□ 0.89
SNRPA1-207ENST00000559309 ESCO1Q5FWF5 840 aa20.6■□□□□ 0.89
SNRPA1-207ENST00000559309 BRD4O60885 1362 aaPredicted RBP20.59■□□□□ 0.89
SNRPA1-207ENST00000559309 ACEP12821 1306 aa20.59■□□□□ 0.89
SNRPA1-207ENST00000559309 A0A1W2PP64 1363 aa20.59■□□□□ 0.89
SNRPA1-207ENST00000559309 USP6P35125 1406 aa20.58■□□□□ 0.88
SNRPA1-207ENST00000559309 SOS2Q07890 1332 aaPredicted RBP20.57■□□□□ 0.88
SNRPA1-207ENST00000559309 COL16A1Q07092 1604 aaPredicted RBP20.57■□□□□ 0.88
SNRPA1-207ENST00000559309 RGS17Q9UGC6 210 aaPredicted RBP20.57■□□□□ 0.88
SNRPA1-207ENST00000559309 ALS2Q96Q42 1657 aa20.57■□□□□ 0.88
SNRPA1-207ENST00000559309 PMFBP1Q8TBY8 1022 aa20.56■□□□□ 0.88
SNRPA1-207ENST00000559309 ZNF692Q9BU19 519 aaPredicted RBP20.56■□□□□ 0.88
SNRPA1-207ENST00000559309 USP54Q70EL1 1684 aa20.56■□□□□ 0.88
SNRPA1-207ENST00000559309 NPHP3Q7Z494 1330 aa20.54■□□□□ 0.88
SNRPA1-207ENST00000559309 EDC4Q6P2E9 1401 aaKnown RBP20.53■□□□□ 0.88
SNRPA1-207ENST00000559309 PER1O15534 1290 aaPredicted RBP20.53■□□□□ 0.88
SNRPA1-207ENST00000559309 FOXO3O43524 673 aa20.53■□□□□ 0.88
SNRPA1-207ENST00000559309 CARD14Q9BXL6 1004 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms