RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 ADAMTS2O95450 1211 aa13.11□□□□□ -0.31
CLPX-205ENST00000559218 ORAI2Q96SN7 254 aa13.11□□□□□ -0.31
CLPX-205ENST00000559218 RGS12O14924 1447 aa13.1□□□□□ -0.31
CLPX-205ENST00000559218 PTCH1Q13635 1447 aa13.1□□□□□ -0.31
CLPX-205ENST00000559218 RRBP1Q9P2E9 1410 aaKnown RBP13.1□□□□□ -0.31
CLPX-205ENST00000559218 VGFO15240 615 aaPredicted RBP13.09□□□□□ -0.31
CLPX-205ENST00000559218 RBM6P78332 1123 aaKnown RBP13.09□□□□□ -0.31
CLPX-205ENST00000559218 NGLY1Q96IV0 654 aa13.09□□□□□ -0.31
CLPX-205ENST00000559218 SOS2Q07890 1332 aaPredicted RBP13.08□□□□□ -0.32
CLPX-205ENST00000559218 SLC4A1APQ9BWU0 796 aaKnown RBP13.06□□□□□ -0.32
CLPX-205ENST00000559218 RPGRIP1LQ68CZ1 1315 aa13.06□□□□□ -0.32
CLPX-205ENST00000559218 KIF1BO60333 1816 aa13.06□□□□□ -0.32
CLPX-205ENST00000559218 HFM1A2PYH4 1435 aa13.05□□□□□ -0.32
CLPX-205ENST00000559218 PRAG1Q86YV5 1406 aa13.05□□□□□ -0.32
CLPX-205ENST00000559218 LAMC1P11047 1609 aa13.05□□□□□ -0.32
CLPX-205ENST00000559218 EP400Q96L91 3159 aa13.05□□□□□ -0.32
CLPX-205ENST00000559218 USP21Q9UK80 565 aa13.04□□□□□ -0.32
CLPX-205ENST00000559218 XPCQ01831 940 aaPredicted RBP13.02□□□□□ -0.33
CLPX-205ENST00000559218 ESCO1Q5FWF5 840 aa13.02□□□□□ -0.33
CLPX-205ENST00000559218 FNBP4Q8N3X1 1017 aaPredicted RBP13.02□□□□□ -0.33
CLPX-205ENST00000559218 ADGRF5Q8IZF2 1346 aa13.02□□□□□ -0.33
CLPX-205ENST00000559218 STK26Q9P289 416 aa13.01□□□□□ -0.33
CLPX-205ENST00000559218 TRPC5Q9UL62 973 aaPredicted RBP13.01□□□□□ -0.33
CLPX-205ENST00000559218 PPLO60437 1756 aa13□□□□□ -0.33
CLPX-205ENST00000559218 MYOM2P54296 1465 aa13□□□□□ -0.33
CLPX-205ENST00000559218 PXDNQ92626 1479 aa13□□□□□ -0.33
CLPX-205ENST00000559218 FOXO3O43524 673 aa13□□□□□ -0.33
CLPX-205ENST00000559218 RGL3Q3MIN7 710 aa13□□□□□ -0.33
CLPX-205ENST00000559218 WAPLQ7Z5K2 1190 aa13□□□□□ -0.33
CLPX-205ENST00000559218 ATRNO75882 1429 aa12.99□□□□□ -0.33
CLPX-205ENST00000559218 ATAD2Q6PL18 1390 aa12.99□□□□□ -0.33
CLPX-205ENST00000559218 NPHP3Q7Z494 1330 aa12.99□□□□□ -0.33
CLPX-205ENST00000559218 NUTM2FA1L443 756 aa12.99□□□□□ -0.33
CLPX-205ENST00000559218 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
CLPX-205ENST00000559218 BCL9LQ86UU0 1499 aa12.98□□□□□ -0.33
CLPX-205ENST00000559218 PLEKHH1Q9ULM0 1364 aa12.98□□□□□ -0.33
CLPX-205ENST00000559218 TMEM132EQ6IEE7 984 aa12.98□□□□□ -0.33
CLPX-205ENST00000559218 COL22A1Q8NFW1 1626 aaPredicted RBP12.98□□□□□ -0.33
CLPX-205ENST00000559218 SPATA31E1Q6ZUB1 1445 aa12.97□□□□□ -0.33
CLPX-205ENST00000559218 CAPN15O75808 1086 aa12.97□□□□□ -0.33
CLPX-205ENST00000559218 CCDC144AA2RUR9 1427 aa12.96□□□□□ -0.33
CLPX-205ENST00000559218 TECPR2O15040 1411 aa12.96□□□□□ -0.33
CLPX-205ENST00000559218 LRPPRCP42704 1394 aaKnown RBP12.96□□□□□ -0.33
CLPX-205ENST00000559218 SLC4A2P04920 1241 aa12.95□□□□□ -0.34
CLPX-205ENST00000559218 ABCC11Q96J66 1382 aa12.94□□□□□ -0.34
CLPX-205ENST00000559218 ANKRD30BQ9BXX2 1392 aa12.94□□□□□ -0.34
CLPX-205ENST00000559218 MPHOSPH9Q99550 1183 aa12.94□□□□□ -0.34
CLPX-205ENST00000559218 GJD4Q96KN9 370 aaPredicted RBP12.93□□□□□ -0.34
CLPX-205ENST00000559218 PIK3C2GO75747 1445 aa12.93□□□□□ -0.34
CLPX-205ENST00000559218 SPATA31A3Q5VYP0 1347 aa12.92□□□□□ -0.34
CLPX-205ENST00000559218 YTHDC2Q9H6S0 1430 aaKnown RBP12.92□□□□□ -0.34
CLPX-205ENST00000559218 KRT28Q7Z3Y7 464 aa12.91□□□□□ -0.34
CLPX-205ENST00000559218 UNC5CLQ8IV45 518 aa12.9□□□□□ -0.34
CLPX-205ENST00000559218 SLIT2O94813 1529 aa12.89□□□□□ -0.35
CLPX-205ENST00000559218 IFT172Q9UG01 1749 aa12.89□□□□□ -0.35
CLPX-205ENST00000559218 PLEKHG5O94827 1062 aa12.89□□□□□ -0.35
CLPX-205ENST00000559218 SAMD1Q6SPF0 538 aaPredicted RBP12.89□□□□□ -0.35
CLPX-205ENST00000559218 CABLES1Q8TDN4 633 aa12.89□□□□□ -0.35
CLPX-205ENST00000559218 C14orf93Q9H972 538 aaKnown RBP12.89□□□□□ -0.35
CLPX-205ENST00000559218 ZRANB1Q9UGI0 708 aa12.89□□□□□ -0.35
CLPX-205ENST00000559218 RALGAPBQ86X10 1494 aa12.89□□□□□ -0.35
CLPX-205ENST00000559218 FMN2Q9NZ56 1722 aa12.88□□□□□ -0.35
CLPX-205ENST00000559218 SAFB2Q14151 953 aaKnown RBP eCLIP12.88□□□□□ -0.35
CLPX-205ENST00000559218 CFAP70Q5T0N1 1121 aa12.88□□□□□ -0.35
CLPX-205ENST00000559218 PHF8Q9UPP1 1060 aa12.88□□□□□ -0.35
CLPX-205ENST00000559218 GLI3P10071 1580 aa12.88□□□□□ -0.35
CLPX-205ENST00000559218 KNDC1Q76NI1 1749 aa12.88□□□□□ -0.35
CLPX-205ENST00000559218 MARF1Q9Y4F3 1742 aaKnown RBP12.88□□□□□ -0.35
CLPX-205ENST00000559218 CCDC125Q86Z20 511 aa12.87□□□□□ -0.35
CLPX-205ENST00000559218 SIRT1Q96EB6 747 aa12.87□□□□□ -0.35
CLPX-205ENST00000559218 ZNF219Q9P2Y4 722 aaPredicted RBP12.87□□□□□ -0.35
CLPX-205ENST00000559218 PRAM1Q96QH2 718 aa12.86□□□□□ -0.35
CLPX-205ENST00000559218 SPINK5Q9NQ38 1064 aaPredicted RBP12.86□□□□□ -0.35
CLPX-205ENST00000559218 TNS3Q68CZ2 1445 aa12.86□□□□□ -0.35
CLPX-205ENST00000559218 NRXN1Q9ULB1 1477 aa12.85□□□□□ -0.35
CLPX-205ENST00000559218 USP32Q8NFA0 1604 aa12.85□□□□□ -0.35
CLPX-205ENST00000559218 HAP1P54257 671 aaPredicted RBP12.85□□□□□ -0.35
CLPX-205ENST00000559218 LMOD2Q6P5Q4 547 aa12.85□□□□□ -0.35
CLPX-205ENST00000559218 KIF1AQ12756 1690 aa12.85□□□□□ -0.35
CLPX-205ENST00000559218 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.85□□□□□ -0.35
CLPX-205ENST00000559218 DHX57Q6P158 1386 aaKnown RBP12.84□□□□□ -0.35
CLPX-205ENST00000559218 PSME1Q06323 249 aa12.84□□□□□ -0.35
CLPX-205ENST00000559218 DEFB132Q7Z7B7 95 aa12.84□□□□□ -0.35
CLPX-205ENST00000559218 SEPT12Q8IYM1 358 aa12.84□□□□□ -0.35
CLPX-205ENST00000559218 BLMP54132 1417 aaPredicted RBP12.84□□□□□ -0.35
CLPX-205ENST00000559218 SBNO1A3KN83 1393 aa12.83□□□□□ -0.36
CLPX-205ENST00000559218 DSG3P32926 999 aa12.83□□□□□ -0.36
CLPX-205ENST00000559218 VPS72Q15906 364 aa12.83□□□□□ -0.36
CLPX-205ENST00000559218 FAM83GA6ND36 823 aa12.82□□□□□ -0.36
CLPX-205ENST00000559218 PMFBP1Q8TBY8 1022 aa12.82□□□□□ -0.36
CLPX-205ENST00000559218 CCDC9Q9Y3X0 531 aaKnown RBP12.82□□□□□ -0.36
CLPX-205ENST00000559218 ONECUT3O60422 494 aaPredicted RBP12.81□□□□□ -0.36
CLPX-205ENST00000559218 HIRIP3Q9BW71 556 aaPredicted RBP12.81□□□□□ -0.36
CLPX-205ENST00000559218 POGKQ9P215 609 aa12.81□□□□□ -0.36
CLPX-205ENST00000559218 RGPD8O14715 1765 aaPredicted RBP12.81□□□□□ -0.36
CLPX-205ENST00000559218 ARHGEF10O15013 1369 aa12.81□□□□□ -0.36
CLPX-205ENST00000559218 KRT27Q7Z3Y8 459 aa12.79□□□□□ -0.36
CLPX-205ENST00000559218 TRAK1Q9UPV9 953 aa12.79□□□□□ -0.36
CLPX-205ENST00000559218 PRR36Q9H6K5 1346 aa12.79□□□□□ -0.36
CLPX-205ENST00000559218 ANKARQ7Z5J8 1434 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms