RNA–Protein interactions for RNA: ENST00000558807.1

NEO1-204, Transcript of neogenin 1, humanhuman

TSL 3

Gene NEO1, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-204ENST00000558807 IL27Q8NEV9 243 aa8.47□□□□□ -1.05
NEO1-204ENST00000558807 FDX1P10109 184 aa8.45□□□□□ -1.06
NEO1-204ENST00000558807 RSBN1LQ6PCB5 846 aaPredicted RBP8.45□□□□□ -1.06
NEO1-204ENST00000558807 RSPH6AQ9H0K4 717 aa8.45□□□□□ -1.06
NEO1-204ENST00000558807 Q3C1V9 767 aa8.44□□□□□ -1.06
NEO1-204ENST00000558807 RIC3Q7Z5B4 369 aa8.44□□□□□ -1.06
NEO1-204ENST00000558807 NKX2-3Q8TAU0 364 aa8.44□□□□□ -1.06
NEO1-204ENST00000558807 PCDHGC3Q9UN70 934 aa8.44□□□□□ -1.06
NEO1-204ENST00000558807 SPTLC1O15269 473 aa8.43□□□□□ -1.06
NEO1-204ENST00000558807 SH3D19Q5HYK7 790 aa8.43□□□□□ -1.06
NEO1-204ENST00000558807 RNF19BQ6ZMZ0 732 aa8.43□□□□□ -1.06
NEO1-204ENST00000558807 THAP11Q96EK4 314 aa8.43□□□□□ -1.06
NEO1-204ENST00000558807 POLR3EQ9NVU0 708 aa8.43□□□□□ -1.06
NEO1-204ENST00000558807 LIMD1Q9UGP4 676 aa8.43□□□□□ -1.06
NEO1-204ENST00000558807 FMNL1O95466 1100 aaPredicted RBP8.42□□□□□ -1.06
NEO1-204ENST00000558807 ADH1BP00325 375 aa8.42□□□□□ -1.06
NEO1-204ENST00000558807 GJA5P36382 358 aa8.42□□□□□ -1.06
NEO1-204ENST00000558807 CLK2P49760 499 aaKnown RBP8.42□□□□□ -1.06
NEO1-204ENST00000558807 BRICD5Q6PL45 260 aa8.42□□□□□ -1.06
NEO1-204ENST00000558807 SALL2Q9Y467 1007 aaPredicted RBP8.42□□□□□ -1.06
NEO1-204ENST00000558807 SPSB2Q99619 263 aa8.41□□□□□ -1.06
NEO1-204ENST00000558807 C6orf229H3BNL8 230 aa8.4□□□□□ -1.06
NEO1-204ENST00000558807 SKIV2LQ15477 1246 aaKnown RBP8.4□□□□□ -1.06
NEO1-204ENST00000558807 CSPP1Q1MSJ5 1256 aa8.4□□□□□ -1.06
NEO1-204ENST00000558807 SYMPKQ92797 1274 aaKnown RBP8.4□□□□□ -1.06
NEO1-204ENST00000558807 PCDHB15Q9Y5E8 787 aa8.4□□□□□ -1.06
NEO1-204ENST00000558807 CUX2O14529 1486 aa8.39□□□□□ -1.07
NEO1-204ENST00000558807 PPP1R18Q6NYC8 613 aa8.38□□□□□ -1.07
NEO1-204ENST00000558807 USB1Q9BQ65 265 aaKnown RBP8.38□□□□□ -1.07
NEO1-204ENST00000558807 GOPCQ9HD26 462 aa8.38□□□□□ -1.07
NEO1-204ENST00000558807 S1PR4O95977 384 aa8.37□□□□□ -1.07
NEO1-204ENST00000558807 MTMR2Q13614 643 aa8.37□□□□□ -1.07
NEO1-204ENST00000558807 QPCTQ16769 361 aa8.37□□□□□ -1.07
NEO1-204ENST00000558807 TUSC1Q2TAM9 212 aa8.37□□□□□ -1.07
NEO1-204ENST00000558807 RETREG3Q86VR2 466 aa8.37□□□□□ -1.07
NEO1-204ENST00000558807 FAM160A2Q8N612 972 aaPredicted RBP8.37□□□□□ -1.07
NEO1-204ENST00000558807 PROCA1Q8NCQ7 364 aaPredicted RBP8.37□□□□□ -1.07
NEO1-204ENST00000558807 CABLES1Q8TDN4 633 aa8.37□□□□□ -1.07
NEO1-204ENST00000558807 ZBTB3Q9H5J0 574 aa8.37□□□□□ -1.07
NEO1-204ENST00000558807 PRDM9Q9NQV7 894 aa8.37□□□□□ -1.07
NEO1-204ENST00000558807 ATP1B4Q9UN42 357 aaPredicted RBP8.37□□□□□ -1.07
NEO1-204ENST00000558807 HRCP23327 699 aa8.36□□□□□ -1.07
NEO1-204ENST00000558807 MSS51Q4VC12 460 aa8.36□□□□□ -1.07
NEO1-204ENST00000558807 PRPF38BQ5VTL8 546 aaKnown RBP8.36□□□□□ -1.07
NEO1-204ENST00000558807 PCMTD1Q96MG8 357 aaPredicted RBP8.36□□□□□ -1.07
NEO1-204ENST00000558807 SLC6A16Q9GZN6 736 aa8.36□□□□□ -1.07
NEO1-204ENST00000558807 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.35□□□□□ -1.07
NEO1-204ENST00000558807 SPDYE5A6NIY4 337 aa8.34□□□□□ -1.07
NEO1-204ENST00000558807 NUTM2BA6NNL0 878 aaPredicted RBP8.34□□□□□ -1.07
NEO1-204ENST00000558807 NUTM2EB1AL46 878 aaPredicted RBP8.34□□□□□ -1.07
NEO1-204ENST00000558807 LILRB3O75022 631 aa8.34□□□□□ -1.07
NEO1-204ENST00000558807 GGCXP38435 758 aa8.34□□□□□ -1.07
NEO1-204ENST00000558807 NUTM2DQ5VT03 806 aaPredicted RBP8.34□□□□□ -1.07
NEO1-204ENST00000558807 NUTM2AQ8IVF1 878 aaPredicted RBP8.34□□□□□ -1.07
NEO1-204ENST00000558807 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.34□□□□□ -1.07
NEO1-204ENST00000558807 PRR7Q8TB68 274 aa8.33□□□□□ -1.08
NEO1-204ENST00000558807 IRX2Q9BZI1 471 aaPredicted RBP8.33□□□□□ -1.08
NEO1-204ENST00000558807 CFAP99D6REC4 459 aa8.32□□□□□ -1.08
NEO1-204ENST00000558807 RTL5Q5HYW3 569 aaPredicted RBP8.32□□□□□ -1.08
NEO1-204ENST00000558807 RNF223E7ERA6 249 aa8.31□□□□□ -1.08
NEO1-204ENST00000558807 PPEF1O14829 653 aaPredicted RBP8.31□□□□□ -1.08
NEO1-204ENST00000558807 DXOO77932 396 aaKnown RBP8.31□□□□□ -1.08
NEO1-204ENST00000558807 JUNDP17535 347 aa8.31□□□□□ -1.08
NEO1-204ENST00000558807 FBXO31Q5XUX0 539 aaPredicted RBP8.31□□□□□ -1.08
NEO1-204ENST00000558807 MMP16P51512 607 aa8.3□□□□□ -1.08
NEO1-204ENST00000558807 PRKD2Q9BZL6 878 aa8.3□□□□□ -1.08
NEO1-204ENST00000558807 PPP2R2DQ66LE6 453 aa8.29□□□□□ -1.08
NEO1-204ENST00000558807 TSC1Q92574 1164 aa8.29□□□□□ -1.08
NEO1-204ENST00000558807 TMEM132AQ24JP5 1023 aa8.28□□□□□ -1.08
NEO1-204ENST00000558807 DESI1Q6ICB0 168 aa8.28□□□□□ -1.08
NEO1-204ENST00000558807 ANKLE1Q8NAG6 615 aa8.28□□□□□ -1.08
NEO1-204ENST00000558807 FCF1Q9Y324 198 aaKnown RBP8.28□□□□□ -1.08
NEO1-204ENST00000558807 V9GY48 417 aaPredicted RBP8.28□□□□□ -1.08
NEO1-204ENST00000558807 ERCC6Q03468 1493 aa8.27□□□□□ -1.09
NEO1-204ENST00000558807 HELBQ8NG08 1087 aaPredicted RBP8.27□□□□□ -1.09
NEO1-204ENST00000558807 RFC5P40937 340 aa8.26□□□□□ -1.09
NEO1-204ENST00000558807 PTPRNQ16849 979 aa8.25□□□□□ -1.09
NEO1-204ENST00000558807 PLA2G2CQ5R387 149 aa8.25□□□□□ -1.09
NEO1-204ENST00000558807 NUDT12Q9BQG2 462 aa8.25□□□□□ -1.09
NEO1-204ENST00000558807 AP1G2O75843 785 aa8.24□□□□□ -1.09
NEO1-204ENST00000558807 LYPD8Q6UX82 237 aa8.24□□□□□ -1.09
NEO1-204ENST00000558807 CCDC24Q8N4L8 307 aa8.24□□□□□ -1.09
NEO1-204ENST00000558807 NCAPD3P42695 1498 aa8.24□□□□□ -1.09
NEO1-204ENST00000558807 PER1O15534 1290 aaPredicted RBP8.23□□□□□ -1.09
NEO1-204ENST00000558807 CCNYL3P0C7X3 344 aa8.23□□□□□ -1.09
NEO1-204ENST00000558807 EMID1Q96A84 441 aaPredicted RBP8.23□□□□□ -1.09
NEO1-204ENST00000558807 CTDSPL2Q05D32 466 aa8.22□□□□□ -1.09
NEO1-204ENST00000558807 TMEM259Q4ZIN3 620 aa8.21□□□□□ -1.1
NEO1-204ENST00000558807 GFRA3O60609 400 aa8.2□□□□□ -1.1
NEO1-204ENST00000558807 USP17L8P0C7I0 530 aa8.2□□□□□ -1.1
NEO1-204ENST00000558807 LAPTM4AQ15012 233 aa8.2□□□□□ -1.1
NEO1-204ENST00000558807 NESP48681 1621 aa8.2□□□□□ -1.1
NEO1-204ENST00000558807 F12P00748 615 aaPredicted RBP8.19□□□□□ -1.1
NEO1-204ENST00000558807 CTHP32929 405 aa8.19□□□□□ -1.1
NEO1-204ENST00000558807 SLC19A1P41440 591 aa8.19□□□□□ -1.1
NEO1-204ENST00000558807 LIAT1Q6ZQX7 453 aa8.19□□□□□ -1.1
NEO1-204ENST00000558807 LRRN4Q8WUT4 740 aa8.19□□□□□ -1.1
NEO1-204ENST00000558807 EVA1BQ9NVM1 165 aa8.19□□□□□ -1.1
NEO1-204ENST00000558807 MAP10Q9P2G4 905 aa8.19□□□□□ -1.1
NEO1-204ENST00000558807 ZBTB24O43167 697 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms