RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 XRN1Q8IZH2 1706 aaKnown RBP17.7■□□□□ 0.42
SMAD3-207ENST00000558763 ABCC11Q96J66 1382 aa17.7■□□□□ 0.42
SMAD3-207ENST00000558763 PIK3R4Q99570 1358 aa17.7■□□□□ 0.42
SMAD3-207ENST00000558763 SAFB2Q14151 953 aaKnown RBP eCLIP17.7■□□□□ 0.42
SMAD3-207ENST00000558763 AMOTL2Q9Y2J4 779 aa17.7■□□□□ 0.42
SMAD3-207ENST00000558763 CHD2O14647 1828 aaKnown RBP17.69■□□□□ 0.42
SMAD3-207ENST00000558763 CPS1P31327 1500 aa17.69■□□□□ 0.42
SMAD3-207ENST00000558763 TULP4Q9NRJ4 1543 aa17.69■□□□□ 0.42
SMAD3-207ENST00000558763 RALBP1Q15311 655 aa17.68■□□□□ 0.42
SMAD3-207ENST00000558763 PRAM1Q96QH2 718 aa17.68■□□□□ 0.42
SMAD3-207ENST00000558763 DLC1Q96QB1 1528 aa17.68■□□□□ 0.42
SMAD3-207ENST00000558763 TECPR2O15040 1411 aa17.68■□□□□ 0.42
SMAD3-207ENST00000558763 CNGB1Q14028 1251 aaPredicted RBP17.68■□□□□ 0.42
SMAD3-207ENST00000558763 MYBBP1AQ9BQG0 1328 aaKnown RBP17.67■□□□□ 0.42
SMAD3-207ENST00000558763 ROBO2Q9HCK4 1378 aa17.67■□□□□ 0.42
SMAD3-207ENST00000558763 SLC24A1O60721 1099 aa17.67■□□□□ 0.42
SMAD3-207ENST00000558763 PLEKHH1Q9ULM0 1364 aa17.67■□□□□ 0.42
SMAD3-207ENST00000558763 KCNA6P17658 529 aa17.66■□□□□ 0.42
SMAD3-207ENST00000558763 WAPLQ7Z5K2 1190 aa17.66■□□□□ 0.42
SMAD3-207ENST00000558763 POGKQ9P215 609 aa17.66■□□□□ 0.42
SMAD3-207ENST00000558763 BRD4O60885 1362 aaPredicted RBP17.65■□□□□ 0.42
SMAD3-207ENST00000558763 NWD1Q149M9 1564 aa17.65■□□□□ 0.42
SMAD3-207ENST00000558763 PTCH1Q13635 1447 aa17.65■□□□□ 0.42
SMAD3-207ENST00000558763 AMER1Q5JTC6 1135 aaPredicted RBP17.64■□□□□ 0.41
SMAD3-207ENST00000558763 FAM135BQ49AJ0 1406 aa17.63■□□□□ 0.41
SMAD3-207ENST00000558763 STRCP1A6NGW2 1772 aa17.63■□□□□ 0.41
SMAD3-207ENST00000558763 DMRT2Q9Y5R5 561 aa17.62■□□□□ 0.41
SMAD3-207ENST00000558763 HNRNPUQ00839 825 aaKnown RBP eCLIP17.62■□□□□ 0.41
SMAD3-207ENST00000558763 FAM9BQ8IZU0 186 aa17.62■□□□□ 0.41
SMAD3-207ENST00000558763 PNISRQ8TF01 805 aaKnown RBP17.62■□□□□ 0.41
SMAD3-207ENST00000558763 MINK1Q8N4C8 1332 aaPredicted RBP17.62■□□□□ 0.41
SMAD3-207ENST00000558763 NPC1L1Q9UHC9 1359 aa17.62■□□□□ 0.41
SMAD3-207ENST00000558763 RBM33Q96EV2 1170 aaKnown RBP17.6■□□□□ 0.41
SMAD3-207ENST00000558763 ZNF335Q9H4Z2 1342 aaPredicted RBP17.6■□□□□ 0.41
SMAD3-207ENST00000558763 CC2D1BQ5T0F9 858 aaKnown RBP17.6■□□□□ 0.41
SMAD3-207ENST00000558763 NLRP13Q86W25 1043 aa17.59■□□□□ 0.41
SMAD3-207ENST00000558763 SIRT1Q96EB6 747 aa17.59■□□□□ 0.41
SMAD3-207ENST00000558763 NKTRP30414 1462 aaKnown RBP17.59■□□□□ 0.41
SMAD3-207ENST00000558763 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.58■□□□□ 0.41
SMAD3-207ENST00000558763 CARD14Q9BXL6 1004 aa17.58■□□□□ 0.4
SMAD3-207ENST00000558763 PUS7Q96PZ0 661 aaKnown RBP17.57■□□□□ 0.4
SMAD3-207ENST00000558763 USP32Q8NFA0 1604 aa17.57■□□□□ 0.4
SMAD3-207ENST00000558763 KNSTRNQ9Y448 316 aa17.57■□□□□ 0.4
SMAD3-207ENST00000558763 NALCNQ8IZF0 1738 aa17.56■□□□□ 0.4
SMAD3-207ENST00000558763 TMC1Q8TDI8 760 aa17.56■□□□□ 0.4
SMAD3-207ENST00000558763 PROSER2Q86WR7 435 aaPredicted RBP17.55■□□□□ 0.4
SMAD3-207ENST00000558763 ZBED9Q6R2W3 1325 aa17.54■□□□□ 0.4
SMAD3-207ENST00000558763 EVC2Q86UK5 1308 aa17.54■□□□□ 0.4
SMAD3-207ENST00000558763 C14orf37Q86TY3 774 aa17.53■□□□□ 0.4
SMAD3-207ENST00000558763 ADGRB2O60241 1585 aa17.53■□□□□ 0.4
SMAD3-207ENST00000558763 TMEM94Q12767 1356 aa17.52■□□□□ 0.4
SMAD3-207ENST00000558763 SLC12A5Q9H2X9 1139 aa17.52■□□□□ 0.4
SMAD3-207ENST00000558763 SRPK2P78362 688 aaKnown RBP17.51■□□□□ 0.39
SMAD3-207ENST00000558763 CABP2Q9NPB3 220 aa17.51■□□□□ 0.39
SMAD3-207ENST00000558763 NSD3Q9BZ95 1437 aa17.51■□□□□ 0.39
SMAD3-207ENST00000558763 ADGRL3Q9HAR2 1447 aa17.51■□□□□ 0.39
SMAD3-207ENST00000558763 CDK19Q9BWU1 502 aa17.5■□□□□ 0.39
SMAD3-207ENST00000558763 LRRC7Q96NW7 1537 aa17.5■□□□□ 0.39
SMAD3-207ENST00000558763 WASLO00401 505 aaPredicted RBP17.49■□□□□ 0.39
SMAD3-207ENST00000558763 PPP2R1AP30153 589 aa17.49■□□□□ 0.39
SMAD3-207ENST00000558763 ANKRD36BQ8N2N9 1353 aa17.49■□□□□ 0.39
SMAD3-207ENST00000558763 CD163L1Q9NR16 1453 aa17.49■□□□□ 0.39
SMAD3-207ENST00000558763 XIRP1Q702N8 1843 aaKnown RBP17.49■□□□□ 0.39
SMAD3-207ENST00000558763 NUTM2FA1L443 756 aa17.48■□□□□ 0.39
SMAD3-207ENST00000558763 CDC42BPGQ6DT37 1551 aa17.48■□□□□ 0.39
SMAD3-207ENST00000558763 INSRP06213 1382 aa17.47■□□□□ 0.39
SMAD3-207ENST00000558763 NINLQ9Y2I6 1382 aa17.47■□□□□ 0.39
SMAD3-207ENST00000558763 BLMP54132 1417 aaPredicted RBP17.47■□□□□ 0.39
SMAD3-207ENST00000558763 ATAD2Q6PL18 1390 aa17.46■□□□□ 0.38
SMAD3-207ENST00000558763 LTBP4Q8N2S1 1624 aa17.45■□□□□ 0.38
SMAD3-207ENST00000558763 FMN2Q9NZ56 1722 aa17.45■□□□□ 0.38
SMAD3-207ENST00000558763 A0A1W2PP64 1363 aa17.45■□□□□ 0.38
SMAD3-207ENST00000558763 ATP7BP35670 1465 aa17.44■□□□□ 0.38
SMAD3-207ENST00000558763 NCOA3Q9Y6Q9 1424 aa17.43■□□□□ 0.38
SMAD3-207ENST00000558763 PRR36Q9H6K5 1346 aa17.43■□□□□ 0.38
SMAD3-207ENST00000558763 C19orf44Q9H6X5 657 aa17.42■□□□□ 0.38
SMAD3-207ENST00000558763 MSH6P52701 1360 aa17.42■□□□□ 0.38
SMAD3-207ENST00000558763 NUDT16Q96DE0 195 aaKnown RBP17.42■□□□□ 0.38
SMAD3-207ENST00000558763 RGPD8O14715 1765 aaPredicted RBP17.42■□□□□ 0.38
SMAD3-207ENST00000558763 ANKRD26Q9UPS8 1709 aa17.42■□□□□ 0.38
SMAD3-207ENST00000558763 TOPAZ1Q8N9V7 1692 aa17.4■□□□□ 0.38
SMAD3-207ENST00000558763 SUPT16HQ9Y5B9 1047 aaKnown RBP17.4■□□□□ 0.38
SMAD3-207ENST00000558763 PPIP5K1Q6PFW1 1433 aa17.4■□□□□ 0.38
SMAD3-207ENST00000558763 SHPRHQ149N8 1683 aa17.4■□□□□ 0.38
SMAD3-207ENST00000558763 DCCP43146 1447 aa17.39■□□□□ 0.37
SMAD3-207ENST00000558763 ATF3P18847 181 aa17.39■□□□□ 0.37
SMAD3-207ENST00000558763 NSD2O96028 1365 aa17.39■□□□□ 0.37
SMAD3-207ENST00000558763 ITSN1Q15811 1721 aa17.39■□□□□ 0.37
SMAD3-207ENST00000558763 CABP1Q9NZU7 370 aa17.39■□□□□ 0.37
SMAD3-207ENST00000558763 CGNL1Q0VF96 1302 aa17.38■□□□□ 0.37
SMAD3-207ENST00000558763 ANKARQ7Z5J8 1434 aa17.38■□□□□ 0.37
SMAD3-207ENST00000558763 CCDC61Q9Y6R9 512 aa17.38■□□□□ 0.37
SMAD3-207ENST00000558763 SMG6Q86US8 1419 aaKnown RBP17.37■□□□□ 0.37
SMAD3-207ENST00000558763 KIF20BQ96Q89 1820 aa17.37■□□□□ 0.37
SMAD3-207ENST00000558763 SENP3-EIF4A1A0A087X0R7 540 aa17.37■□□□□ 0.37
SMAD3-207ENST00000558763 CADPS2Q86UW7 1296 aa17.36■□□□□ 0.37
SMAD3-207ENST00000558763 POLR3AO14802 1390 aaPredicted RBP17.35■□□□□ 0.37
SMAD3-207ENST00000558763 MST1RQ04912 1400 aa17.35■□□□□ 0.37
SMAD3-207ENST00000558763 ADAMTS8Q9UP79 889 aa17.35■□□□□ 0.37
SMAD3-207ENST00000558763 MON2Q7Z3U7 1717 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms