RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 RIPK4P57078 832 aa14.11□□□□□ -0.15
PCAT29-201ENST00000558411 CCDC146Q8IYE0 955 aa14.11□□□□□ -0.15
PCAT29-201ENST00000558411 ANP32BQ92688 251 aaKnown RBP14.11□□□□□ -0.15
PCAT29-201ENST00000558411 PLA2R1Q13018 1463 aa14.1□□□□□ -0.15
PCAT29-201ENST00000558411 SMAP1Q8IYB5 467 aaPredicted RBP14.1□□□□□ -0.15
PCAT29-201ENST00000558411 TSPY4P0CV99 314 aa14.09□□□□□ -0.15
PCAT29-201ENST00000558411 TSPY10P0CW01 314 aa14.09□□□□□ -0.15
PCAT29-201ENST00000558411 MSNP26038 577 aaKnown RBP14.09□□□□□ -0.15
PCAT29-201ENST00000558411 RAB3GAP1Q15042 981 aa14.09□□□□□ -0.15
PCAT29-201ENST00000558411 TNPO1Q92973 898 aaKnown RBP14.09□□□□□ -0.15
PCAT29-201ENST00000558411 ATP10AO60312 1499 aa14.09□□□□□ -0.15
PCAT29-201ENST00000558411 RBM25P49756 843 aaKnown RBP14.08□□□□□ -0.16
PCAT29-201ENST00000558411 NASPP49321 788 aaPredicted RBP14.08□□□□□ -0.16
PCAT29-201ENST00000558411 RARSP54136 660 aaKnown RBP14.08□□□□□ -0.16
PCAT29-201ENST00000558411 ARHGAP31Q2M1Z3 1444 aa14.08□□□□□ -0.16
PCAT29-201ENST00000558411 MFAP1P55081 439 aaKnown RBP14.07□□□□□ -0.16
PCAT29-201ENST00000558411 WWC1Q8IX03 1113 aa14.06□□□□□ -0.16
PCAT29-201ENST00000558411 DMRT2Q9Y5R5 561 aa14.06□□□□□ -0.16
PCAT29-201ENST00000558411 IQGAP3Q86VI3 1631 aa14.06□□□□□ -0.16
PCAT29-201ENST00000558411 ZNF500O60304 480 aaPredicted RBP14.06□□□□□ -0.16
PCAT29-201ENST00000558411 CLEC17AQ6ZS10 378 aa14.06□□□□□ -0.16
PCAT29-201ENST00000558411 RGL3Q3MIN7 710 aa14.05□□□□□ -0.16
PCAT29-201ENST00000558411 RBM10P98175 930 aaKnown RBP14.05□□□□□ -0.16
PCAT29-201ENST00000558411 KDM5AP29375 1690 aaKnown RBP14.04□□□□□ -0.16
PCAT29-201ENST00000558411 MADDQ8WXG6 1647 aa14.04□□□□□ -0.16
PCAT29-201ENST00000558411 KANK1Q14678 1352 aa14.04□□□□□ -0.16
PCAT29-201ENST00000558411 DYNC1I1O14576 645 aa14.03□□□□□ -0.16
PCAT29-201ENST00000558411 RLBP1P12271 317 aa14.03□□□□□ -0.16
PCAT29-201ENST00000558411 NOL7Q9UMY1 257 aaKnown RBP14.03□□□□□ -0.16
PCAT29-201ENST00000558411 POLR3AO14802 1390 aaPredicted RBP14.03□□□□□ -0.16
PCAT29-201ENST00000558411 GOLGA6L22H0YM25 854 aa14.03□□□□□ -0.16
PCAT29-201ENST00000558411 CSPP1Q1MSJ5 1256 aa14.03□□□□□ -0.16
PCAT29-201ENST00000558411 KLHL40Q2TBA0 621 aa14.03□□□□□ -0.16
PCAT29-201ENST00000558411 PLEKHG5O94827 1062 aa14.02□□□□□ -0.16
PCAT29-201ENST00000558411 MCM5P33992 734 aa14.02□□□□□ -0.16
PCAT29-201ENST00000558411 HDAC1Q13547 482 aaPredicted RBP14.02□□□□□ -0.16
PCAT29-201ENST00000558411 MVPQ14764 893 aaKnown RBP14.02□□□□□ -0.16
PCAT29-201ENST00000558411 IQSEC2Q5JU85 1478 aa14.02□□□□□ -0.17
PCAT29-201ENST00000558411 SCAF11Q99590 1463 aaKnown RBP14.02□□□□□ -0.17
PCAT29-201ENST00000558411 MAST1Q9Y2H9 1570 aa14.02□□□□□ -0.17
PCAT29-201ENST00000558411 HSP90AB1P08238 724 aaKnown RBP14.02□□□□□ -0.17
PCAT29-201ENST00000558411 ZNF445P59923 1031 aa14.02□□□□□ -0.17
PCAT29-201ENST00000558411 UTP14CQ5TAP6 766 aaKnown RBP14.01□□□□□ -0.17
PCAT29-201ENST00000558411 WDR63Q8IWG1 891 aa14.01□□□□□ -0.17
PCAT29-201ENST00000558411 PHF23Q9BUL5 403 aaPredicted RBP14.01□□□□□ -0.17
PCAT29-201ENST00000558411 FAM13BQ9NYF5 915 aa14.01□□□□□ -0.17
PCAT29-201ENST00000558411 CEP152O94986 1710 aa14.01□□□□□ -0.17
PCAT29-201ENST00000558411 NCBP3Q53F19 620 aaKnown RBP14□□□□□ -0.17
PCAT29-201ENST00000558411 R3HCC1Q9Y3T6 440 aaKnown RBP14□□□□□ -0.17
PCAT29-201ENST00000558411 SHPRHQ149N8 1683 aa14□□□□□ -0.17
PCAT29-201ENST00000558411 PLB1Q6P1J6 1458 aa14□□□□□ -0.17
PCAT29-201ENST00000558411 RSPH4AQ5TD94 716 aa14□□□□□ -0.17
PCAT29-201ENST00000558411 PDLIM2Q96JY6 352 aa14□□□□□ -0.17
PCAT29-201ENST00000558411 DUOX2Q9NRD8 1548 aa14□□□□□ -0.17
PCAT29-201ENST00000558411 TTC37Q6PGP7 1564 aa13.99□□□□□ -0.17
PCAT29-201ENST00000558411 UQCRHLA0A096LP55 91 aa13.99□□□□□ -0.17
PCAT29-201ENST00000558411 UQCRHP07919 91 aa13.99□□□□□ -0.17
PCAT29-201ENST00000558411 SLC24A1O60721 1099 aa13.98□□□□□ -0.17
PCAT29-201ENST00000558411 CCDC27Q2M243 656 aa13.98□□□□□ -0.17
PCAT29-201ENST00000558411 STAC3Q96MF2 364 aa13.98□□□□□ -0.17
PCAT29-201ENST00000558411 ABCA8O94911 1581 aa13.98□□□□□ -0.17
PCAT29-201ENST00000558411 SPHKAPQ2M3C7 1700 aa13.98□□□□□ -0.17
PCAT29-201ENST00000558411 CT47B1P0C2W7 299 aaPredicted RBP13.97□□□□□ -0.17
PCAT29-201ENST00000558411 KIAA1210Q9ULL0 1709 aa13.97□□□□□ -0.17
PCAT29-201ENST00000558411 ZKSCAN2Q63HK3 967 aa13.96□□□□□ -0.17
PCAT29-201ENST00000558411 RUNDC1Q96C34 613 aa13.96□□□□□ -0.17
PCAT29-201ENST00000558411 TNNQ9UQP3 1299 aa13.96□□□□□ -0.17
PCAT29-201ENST00000558411 K7ELQ4 463 aaPredicted RBP13.96□□□□□ -0.18
PCAT29-201ENST00000558411 SASS6Q6UVJ0 657 aa13.96□□□□□ -0.18
PCAT29-201ENST00000558411 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.96□□□□□ -0.18
PCAT29-201ENST00000558411 ZKSCAN5Q9Y2L8 839 aa13.96□□□□□ -0.18
PCAT29-201ENST00000558411 DDX49Q9Y6V7 483 aaKnown RBP13.96□□□□□ -0.18
PCAT29-201ENST00000558411 SAMD9LQ8IVG5 1584 aa13.95□□□□□ -0.18
PCAT29-201ENST00000558411 PLEKHD1A6NEE1 506 aa13.95□□□□□ -0.18
PCAT29-201ENST00000558411 DZIP1LQ8IYY4 767 aaKnown RBP13.95□□□□□ -0.18
PCAT29-201ENST00000558411 DMTNQ08495 405 aa13.94□□□□□ -0.18
PCAT29-201ENST00000558411 CCDC94Q9BW85 323 aaPredicted RBP13.94□□□□□ -0.18
PCAT29-201ENST00000558411 KIF16BQ96L93 1317 aa13.94□□□□□ -0.18
PCAT29-201ENST00000558411 CFAP74Q9C0B2 1584 aa13.94□□□□□ -0.18
PCAT29-201ENST00000558411 PREX2Q70Z35 1606 aa13.94□□□□□ -0.18
PCAT29-201ENST00000558411 BAG4O95429 457 aaKnown RBP13.94□□□□□ -0.18
PCAT29-201ENST00000558411 JPH4Q96JJ6 628 aa13.94□□□□□ -0.18
PCAT29-201ENST00000558411 ERCC6L2Q5T890 1561 aa13.94□□□□□ -0.18
PCAT29-201ENST00000558411 NCLP19338 710 aaKnown RBP13.93□□□□□ -0.18
PCAT29-201ENST00000558411 HNRNPMP52272 730 aaKnown RBP eCLIP13.93□□□□□ -0.18
PCAT29-201ENST00000558411 FTSJ3Q8IY81 847 aaKnown RBP13.93□□□□□ -0.18
PCAT29-201ENST00000558411 KIF2CQ99661 725 aa13.93□□□□□ -0.18
PCAT29-201ENST00000558411 DDX19BQ9UMR2 479 aa13.93□□□□□ -0.18
PCAT29-201ENST00000558411 REREQ9P2R6 1566 aa13.92□□□□□ -0.18
PCAT29-201ENST00000558411 SSFA2P28290 1259 aa13.92□□□□□ -0.18
PCAT29-201ENST00000558411 CCDC39Q9UFE4 941 aa13.92□□□□□ -0.18
PCAT29-201ENST00000558411 CDC42BPBQ9Y5S2 1711 aa13.92□□□□□ -0.18
PCAT29-201ENST00000558411 BMP2KLQ5H9B9 411 aa13.91□□□□□ -0.18
PCAT29-201ENST00000558411 ADGRL1O94910 1474 aa13.91□□□□□ -0.18
PCAT29-201ENST00000558411 FGD1P98174 961 aa13.91□□□□□ -0.18
PCAT29-201ENST00000558411 XPCQ01831 940 aaPredicted RBP13.91□□□□□ -0.18
PCAT29-201ENST00000558411 NUCB1Q02818 461 aa13.91□□□□□ -0.18
PCAT29-201ENST00000558411 ZSCAN23Q3MJ62 389 aa13.91□□□□□ -0.18
PCAT29-201ENST00000558411 TCP11L2Q8N4U5 519 aa13.9□□□□□ -0.18
PCAT29-201ENST00000558411 NUCB2P80303 420 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms